RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 COA3Q9Y2R0 106 aaPredicted RBP18.39■□□□□ 0.53
SSBP3-216ENST00000610401 EFCAB7A8K855 629 aa18.39■□□□□ 0.53
SSBP3-216ENST00000610401 AGPAT2O15120 278 aa18.39■□□□□ 0.53
SSBP3-216ENST00000610401 ZNF264O43296 627 aa18.39■□□□□ 0.53
SSBP3-216ENST00000610401 ZNF749O43361 778 aa18.39■□□□□ 0.53
SSBP3-216ENST00000610401 HTR2CP28335 458 aa18.39■□□□□ 0.53
SSBP3-216ENST00000610401 EPHA4P54764 986 aa18.39■□□□□ 0.53
SSBP3-216ENST00000610401 GFERP55789 205 aa18.39■□□□□ 0.53
SSBP3-216ENST00000610401 ATPAF1Q5TC12 328 aaPredicted RBP18.39■□□□□ 0.53
SSBP3-216ENST00000610401 ARMC10Q8N2F6 343 aa18.39■□□□□ 0.53
SSBP3-216ENST00000610401 ASB12Q8WXK4 309 aa18.39■□□□□ 0.53
SSBP3-216ENST00000610401 NUDT22Q9BRQ3 303 aa18.39■□□□□ 0.53
SSBP3-216ENST00000610401 SEMA6CQ9H3T2 930 aa18.39■□□□□ 0.53
SSBP3-216ENST00000610401 EMC3Q9P0I2 261 aa18.39■□□□□ 0.53
SSBP3-216ENST00000610401 SDK2Q58EX2 2172 aa18.39■□□□□ 0.53
SSBP3-216ENST00000610401 PTPRSQ13332 1948 aa18.38■□□□□ 0.53
SSBP3-216ENST00000610401 TCRBV21S2A2A0A5A6 115 aa18.38■□□□□ 0.53
SSBP3-216ENST00000610401 A6NCN8 305 aa18.38■□□□□ 0.53
SSBP3-216ENST00000610401 P2RY10O00398 339 aa18.38■□□□□ 0.53
SSBP3-216ENST00000610401 SLC2A1P11166 492 aa18.38■□□□□ 0.53
SSBP3-216ENST00000610401 GPR3P46089 330 aa18.38■□□□□ 0.53
SSBP3-216ENST00000610401 IL10RAQ13651 578 aa18.38■□□□□ 0.53
SSBP3-216ENST00000610401 RNF144BQ7Z419 303 aa18.38■□□□□ 0.53
SSBP3-216ENST00000610401 ATG4DQ86TL0 474 aaPredicted RBP18.38■□□□□ 0.53
SSBP3-216ENST00000610401 OR1S2Q8NGQ3 325 aa18.38■□□□□ 0.53
SSBP3-216ENST00000610401 ZNF416Q9BWM5 594 aa18.38■□□□□ 0.53
SSBP3-216ENST00000610401 MRPS33Q9Y291 106 aaKnown RBP18.38■□□□□ 0.53
SSBP3-216ENST00000610401 DOCK8Q8NF50 2099 aa18.38■□□□□ 0.53
SSBP3-216ENST00000610401 LOC100289279A0A1B0GTE1 492 aa18.38■□□□□ 0.53
SSBP3-216ENST00000610401 TMEM212A6NML5 194 aa18.38■□□□□ 0.53
SSBP3-216ENST00000610401 SHISA8B8ZZ34 492 aa18.38■□□□□ 0.53
SSBP3-216ENST00000610401 DISC1C4P0D8 188 aa18.38■□□□□ 0.53
SSBP3-216ENST00000610401 CAPZA2P47755 286 aa18.38■□□□□ 0.53
SSBP3-216ENST00000610401 ZNF141Q15928 474 aa18.38■□□□□ 0.53
SSBP3-216ENST00000610401 C7orf61Q8IZ16 206 aa18.38■□□□□ 0.53
SSBP3-216ENST00000610401 ELSPBP1Q96BH3 223 aa18.38■□□□□ 0.53
SSBP3-216ENST00000610401 ZBTB8AQ96BR9 441 aa18.38■□□□□ 0.53
SSBP3-216ENST00000610401 TSNAXQ99598 290 aaKnown RBP18.38■□□□□ 0.53
SSBP3-216ENST00000610401 NPAS1Q99742 590 aa18.38■□□□□ 0.53
SSBP3-216ENST00000610401 EMC6Q9BV81 110 aa18.38■□□□□ 0.53
SSBP3-216ENST00000610401 PCDHB16Q9NRJ7 776 aa18.38■□□□□ 0.53
SSBP3-216ENST00000610401 HIF3AQ9Y2N7 669 aa18.38■□□□□ 0.53
SSBP3-216ENST00000610401 A0A0B4J2A0 478 aa18.38■□□□□ 0.53
SSBP3-216ENST00000610401 ZNF254O75437 659 aa18.38■□□□□ 0.53
SSBP3-216ENST00000610401 RPS4XP62701 263 aaKnown RBP18.38■□□□□ 0.53
SSBP3-216ENST00000610401 MRPS10P82664 201 aaKnown RBP18.38■□□□□ 0.53
SSBP3-216ENST00000610401 BAMBIQ13145 260 aa18.38■□□□□ 0.53
SSBP3-216ENST00000610401 TMEM225Q6GV28 225 aa18.38■□□□□ 0.53
SSBP3-216ENST00000610401 SHPKQ9UHJ6 478 aa18.38■□□□□ 0.53
SSBP3-216ENST00000610401 ETV7Q9Y603 341 aa18.38■□□□□ 0.53
SSBP3-216ENST00000610401 TRBV5-5A0A0J9YX44 114 aa18.37■□□□□ 0.53
SSBP3-216ENST00000610401 HPP00738 406 aa18.37■□□□□ 0.53
SSBP3-216ENST00000610401 MPGP29372 298 aa18.37■□□□□ 0.53
SSBP3-216ENST00000610401 SRSF3P84103 164 aaKnown RBP18.37■□□□□ 0.53
SSBP3-216ENST00000610401 C1orf189Q5VU69 101 aa18.37■□□□□ 0.53
SSBP3-216ENST00000610401 SLC41A2Q96JW4 573 aa18.37■□□□□ 0.53
SSBP3-216ENST00000610401 LMF2Q9BU23 707 aaKnown RBP18.37■□□□□ 0.53
SSBP3-216ENST00000610401 CKLFQ9UBR5 152 aa18.37■□□□□ 0.53
SSBP3-216ENST00000610401 KLK13Q9UKR3 277 aa18.37■□□□□ 0.53
SSBP3-216ENST00000610401 CYP8B1Q9UNU6 501 aa18.37■□□□□ 0.53
SSBP3-216ENST00000610401 SRPX2O60687 465 aaPredicted RBP18.37■□□□□ 0.53
SSBP3-216ENST00000610401 GNB3P16520 340 aa18.37■□□□□ 0.53
SSBP3-216ENST00000610401 PRMT2P55345 433 aa18.37■□□□□ 0.53
SSBP3-216ENST00000610401 PPP1R1AQ13522 171 aa18.37■□□□□ 0.53
SSBP3-216ENST00000610401 GUCA2BQ16661 112 aa18.37■□□□□ 0.53
SSBP3-216ENST00000610401 ADAD2Q8NCV1 583 aaKnown RBP18.37■□□□□ 0.53
SSBP3-216ENST00000610401 OTOSQ8NHW6 89 aa18.37■□□□□ 0.53
SSBP3-216ENST00000610401 CST11Q9H112 138 aa18.37■□□□□ 0.53
SSBP3-216ENST00000610401 EPHA6Q9UF33 1036 aa18.37■□□□□ 0.53
SSBP3-216ENST00000610401 PHF3Q92576 2039 aaKnown RBP18.37■□□□□ 0.53
SSBP3-216ENST00000610401 IGHV3-20A0A0C4DH32 117 aa18.36■□□□□ 0.53
SSBP3-216ENST00000610401 KCNJ13O60928 360 aa18.36■□□□□ 0.53
SSBP3-216ENST00000610401 PMP2P02689 132 aa18.36■□□□□ 0.53
SSBP3-216ENST00000610401 IL13RA1P78552 427 aa18.36■□□□□ 0.53
SSBP3-216ENST00000610401 ZNF117Q03924 483 aa18.36■□□□□ 0.53
SSBP3-216ENST00000610401 DMWDQ09019 674 aa18.36■□□□□ 0.53
SSBP3-216ENST00000610401 EIF2B5Q13144 721 aaKnown RBP18.36■□□□□ 0.53
SSBP3-216ENST00000610401 EXOSC6Q5RKV6 272 aaKnown RBP18.36■□□□□ 0.53
SSBP3-216ENST00000610401 TFAP2EQ6VUC0 442 aa18.36■□□□□ 0.53
SSBP3-216ENST00000610401 OR2W3Q7Z3T1 314 aa18.36■□□□□ 0.53
SSBP3-216ENST00000610401 OR4D6Q8NGJ1 314 aa18.36■□□□□ 0.53
SSBP3-216ENST00000610401 SFXN1Q9H9B4 322 aa18.36■□□□□ 0.53
SSBP3-216ENST00000610401 UBQLN4Q9NRR5 601 aa18.36■□□□□ 0.53
SSBP3-216ENST00000610401 NPIPB9F8W1W9 429 aa18.36■□□□□ 0.53
SSBP3-216ENST00000610401 IL32P24001 234 aa18.36■□□□□ 0.53
SSBP3-216ENST00000610401 SLC17A1Q14916 467 aa18.36■□□□□ 0.53
SSBP3-216ENST00000610401 ZNF584Q8IVC4 421 aa18.36■□□□□ 0.53
SSBP3-216ENST00000610401 C19orf47Q8N9M1 422 aaKnown RBP18.36■□□□□ 0.53
SSBP3-216ENST00000610401 PARP12Q9H0J9 701 aaKnown RBP18.36■□□□□ 0.53
SSBP3-216ENST00000610401 LDAHQ9H6V9 325 aa18.36■□□□□ 0.53
SSBP3-216ENST00000610401 MBD2Q9UBB5 411 aa18.36■□□□□ 0.53
SSBP3-216ENST00000610401 PCDHB10Q9UN67 800 aa18.36■□□□□ 0.53
SSBP3-216ENST00000610401 RABL2BQ9UNT1 228 aa18.36■□□□□ 0.53
SSBP3-216ENST00000610401 VSIG4Q9Y279 399 aa18.36■□□□□ 0.53
SSBP3-216ENST00000610401 MYF5P13349 255 aa18.36■□□□□ 0.53
SSBP3-216ENST00000610401 PMPCAQ10713 525 aa18.36■□□□□ 0.53
SSBP3-216ENST00000610401 UBXN2BQ14CS0 331 aa18.36■□□□□ 0.53
SSBP3-216ENST00000610401 VWA2Q5GFL6 755 aa18.36■□□□□ 0.53
SSBP3-216ENST00000610401 OVCH2Q7RTZ1 564 aa18.36■□□□□ 0.53
SSBP3-216ENST00000610401 GALNTL5Q7Z4T8 443 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms