RNA–Protein interactions for RNA: ENST00000607212.1

CTSA-216, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 590 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-216ENST00000607212 MRI1Q9BV20 369 aa12.59□□□□□ -0.39
CTSA-216ENST00000607212 TXNIPQ9H3M7 391 aa12.59□□□□□ -0.39
CTSA-216ENST00000607212 SMURF2Q9HAU4 748 aa12.59□□□□□ -0.39
CTSA-216ENST00000607212 NPHS2Q9NP85 383 aa12.59□□□□□ -0.39
CTSA-216ENST00000607212 UGT2A1Q9Y4X1 527 aa12.59□□□□□ -0.39
CTSA-216ENST00000607212 TIMM10BQ9Y5J6 103 aa12.59□□□□□ -0.39
CTSA-216ENST00000607212 A0A0G2JND7 137 aa12.58□□□□□ -0.4
CTSA-216ENST00000607212 UBOX5O94941 541 aa12.58□□□□□ -0.4
CTSA-216ENST00000607212 CTXN1P60606 82 aa12.58□□□□□ -0.4
CTSA-216ENST00000607212 RPL27P61353 136 aaKnown RBP12.58□□□□□ -0.4
CTSA-216ENST00000607212 HNRNPA0Q13151 305 aaKnown RBP12.58□□□□□ -0.4
CTSA-216ENST00000607212 SLC25A47Q6Q0C1 308 aa12.58□□□□□ -0.4
CTSA-216ENST00000607212 CLDN22Q8N7P3 220 aa12.58□□□□□ -0.4
CTSA-216ENST00000607212 OR2Z1Q8NG97 314 aa12.58□□□□□ -0.4
CTSA-216ENST00000607212 POP5Q969H6 163 aaKnown RBP12.58□□□□□ -0.4
CTSA-216ENST00000607212 ATP6V1G3Q96LB4 118 aa12.58□□□□□ -0.4
CTSA-216ENST00000607212 ALG12Q9BV10 488 aa12.58□□□□□ -0.4
CTSA-216ENST00000607212 POLR2J2Q9GZM3 115 aaKnown RBP12.58□□□□□ -0.4
CTSA-216ENST00000607212 POLR2J3Q9H1A7 115 aaKnown RBP12.58□□□□□ -0.4
CTSA-216ENST00000607212 WNT5BQ9H1J7 359 aa12.58□□□□□ -0.4
CTSA-216ENST00000607212 EGFL7Q9UHF1 273 aa12.58□□□□□ -0.4
CTSA-216ENST00000607212 OPN4Q9UHM6 478 aa12.58□□□□□ -0.4
CTSA-216ENST00000607212 PURGQ9UJV8 347 aaKnown RBP12.58□□□□□ -0.4
CTSA-216ENST00000607212 NDRG4Q9ULP0 352 aaKnown RBP12.58□□□□□ -0.4
CTSA-216ENST00000607212 AUP1Q9Y679 476 aa12.58□□□□□ -0.4
CTSA-216ENST00000607212 C12orf71A8MTZ7 269 aa12.57□□□□□ -0.4
CTSA-216ENST00000607212 NGFP01138 241 aa12.57□□□□□ -0.4
CTSA-216ENST00000607212 CST2P09228 141 aa12.57□□□□□ -0.4
CTSA-216ENST00000607212 TNFRSF1AP19438 455 aa12.57□□□□□ -0.4
CTSA-216ENST00000607212 MSR1P21757 451 aa12.57□□□□□ -0.4
CTSA-216ENST00000607212 ZFP36P26651 326 aaKnown RBP12.57□□□□□ -0.4
CTSA-216ENST00000607212 ZNF133P52736 654 aaPredicted RBP12.57□□□□□ -0.4
CTSA-216ENST00000607212 BAMBIQ13145 260 aa12.57□□□□□ -0.4
CTSA-216ENST00000607212 RABL3Q5HYI8 236 aa12.57□□□□□ -0.4
CTSA-216ENST00000607212 FAM27BQ5VT28 67 aa12.57□□□□□ -0.4
CTSA-216ENST00000607212 NANOGP8Q6NSW7 305 aa12.57□□□□□ -0.4
CTSA-216ENST00000607212 C1orf94Q6P1W5 598 aa12.57□□□□□ -0.4
CTSA-216ENST00000607212 CCDC80Q76M96 950 aa12.57□□□□□ -0.4
CTSA-216ENST00000607212 FNDC8Q8TC99 324 aa12.57□□□□□ -0.4
CTSA-216ENST00000607212 TSPEARQ8WU66 669 aa12.57□□□□□ -0.4
CTSA-216ENST00000607212 SEPHS2Q99611 448 aa12.57□□□□□ -0.4
CTSA-216ENST00000607212 GPA33Q99795 319 aa12.57□□□□□ -0.4
CTSA-216ENST00000607212 MS4A7Q9GZW8 240 aaPredicted RBP12.57□□□□□ -0.4
CTSA-216ENST00000607212 TMEM106BQ9NUM4 274 aa12.57□□□□□ -0.4
CTSA-216ENST00000607212 ARGLU1Q9NWB6 273 aaPredicted RBP12.57□□□□□ -0.4
CTSA-216ENST00000607212 DCAF16Q9NXF7 216 aa12.57□□□□□ -0.4
CTSA-216ENST00000607212 OR5V1Q9UGF6 321 aa12.57□□□□□ -0.4
CTSA-216ENST00000607212 NUP50Q9UKX7 468 aa12.57□□□□□ -0.4
CTSA-216ENST00000607212 A6NIZ1 184 aa12.56□□□□□ -0.4
CTSA-216ENST00000607212 H3BSA7 217 aa12.56□□□□□ -0.4
CTSA-216ENST00000607212 H7C1C5 153 aa12.56□□□□□ -0.4
CTSA-216ENST00000607212 ATP8B1O43520 1251 aa12.56□□□□□ -0.4
CTSA-216ENST00000607212 DOK2O60496 412 aa12.56□□□□□ -0.4
CTSA-216ENST00000607212 RPL4P36578 427 aaKnown RBP12.56□□□□□ -0.4
CTSA-216ENST00000607212 HTR5AP47898 357 aa12.56□□□□□ -0.4
CTSA-216ENST00000607212 RAP1BP61224 184 aa12.56□□□□□ -0.4
CTSA-216ENST00000607212 LCN6P62502 163 aa12.56□□□□□ -0.4
CTSA-216ENST00000607212 RAP1AP62834 184 aa12.56□□□□□ -0.4
CTSA-216ENST00000607212 ST3GAL3Q11203 375 aa12.56□□□□□ -0.4
CTSA-216ENST00000607212 ESCO2Q56NI9 601 aa12.56□□□□□ -0.4
CTSA-216ENST00000607212 SPRNQ5BIV9 151 aa12.56□□□□□ -0.4
CTSA-216ENST00000607212 TMEM255AQ5JRV8 349 aa12.56□□□□□ -0.4
CTSA-216ENST00000607212 FAM205BPQ63HN1 556 aa12.56□□□□□ -0.4
CTSA-216ENST00000607212 ERICH5Q6P6B1 374 aa12.56□□□□□ -0.4
CTSA-216ENST00000607212 SHISA2Q6UWI4 295 aa12.56□□□□□ -0.4
CTSA-216ENST00000607212 NPEPL1Q8NDH3 523 aa12.56□□□□□ -0.4
CTSA-216ENST00000607212 OR51A7Q8NH64 312 aa12.56□□□□□ -0.4
CTSA-216ENST00000607212 BPIFA2Q96DR5 249 aa12.56□□□□□ -0.4
CTSA-216ENST00000607212 MAGEB18Q96M61 343 aa12.56□□□□□ -0.4
CTSA-216ENST00000607212 C1QTNF5Q9BXJ0 243 aa12.56□□□□□ -0.4
CTSA-216ENST00000607212 RERGLQ9H628 205 aa12.56□□□□□ -0.4
CTSA-216ENST00000607212 EMC7Q9NPA0 242 aa12.56□□□□□ -0.4
CTSA-216ENST00000607212 MMP26Q9NRE1 261 aa12.56□□□□□ -0.4
CTSA-216ENST00000607212 TRAV27A0A087WT01 109 aa12.55□□□□□ -0.4
CTSA-216ENST00000607212 DNAJC9-AS1A6NH13 148 aa12.55□□□□□ -0.4
CTSA-216ENST00000607212 NPIPB13A6NJU9 1138 aa12.55□□□□□ -0.4
CTSA-216ENST00000607212 EFCAB9A8MZ26 197 aa12.55□□□□□ -0.4
CTSA-216ENST00000607212 NPIPB4C9JG80 1138 aa12.55□□□□□ -0.4
CTSA-216ENST00000607212 XKRYO14609 159 aa12.55□□□□□ -0.4
CTSA-216ENST00000607212 SURF4O15260 269 aa12.55□□□□□ -0.4
CTSA-216ENST00000607212 IGHV2-70P01814 119 aa12.55□□□□□ -0.4
CTSA-216ENST00000607212 IGHMP01871 453 aa12.55□□□□□ -0.4
CTSA-216ENST00000607212 CD55P08174 381 aa12.55□□□□□ -0.4
CTSA-216ENST00000607212 HKR1P10072 659 aa12.55□□□□□ -0.4
CTSA-216ENST00000607212 THRBP10828 461 aa12.55□□□□□ -0.4
CTSA-216ENST00000607212 RBMXP38159 391 aaKnown RBP12.55□□□□□ -0.4
CTSA-216ENST00000607212 YAP1P46937 504 aaKnown RBP12.55□□□□□ -0.4
CTSA-216ENST00000607212 CRYBA2P53672 197 aa12.55□□□□□ -0.4
CTSA-216ENST00000607212 PSG7Q13046 419 aa12.55□□□□□ -0.4
CTSA-216ENST00000607212 ZNF154Q13106 437 aa12.55□□□□□ -0.4
CTSA-216ENST00000607212 CYBRD1Q53TN4 286 aa12.55□□□□□ -0.4
CTSA-216ENST00000607212 TTMPQ5BVD1 217 aa12.55□□□□□ -0.4
CTSA-216ENST00000607212 ATG16L2Q8NAA4 619 aa12.55□□□□□ -0.4
CTSA-216ENST00000607212 ITLN1Q8WWA0 313 aa12.55□□□□□ -0.4
CTSA-216ENST00000607212 LZICQ8WZA0 190 aa12.55□□□□□ -0.4
CTSA-216ENST00000607212 ZNF747Q9BV97 191 aa12.55□□□□□ -0.4
CTSA-216ENST00000607212 FNDC11Q9BVV2 318 aa12.55□□□□□ -0.4
CTSA-216ENST00000607212 PATZ1Q9HBE1 687 aaKnown RBP12.55□□□□□ -0.4
CTSA-216ENST00000607212 MAN2C1Q9NTJ4 1040 aa12.55□□□□□ -0.4
CTSA-216ENST00000607212 RHCGQ9UBD6 479 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms