RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 MYPOPQ86VE0 399 aaPredicted RBP6.71□□□□□ -1.34
MSH6-211ENST00000606499 LINC00346Q8IVM7 164 aa6.71□□□□□ -1.34
MSH6-211ENST00000606499 TIGD4Q8IY51 512 aa6.71□□□□□ -1.34
MSH6-211ENST00000606499 C17orf78Q8N4C9 275 aa6.71□□□□□ -1.34
MSH6-211ENST00000606499 RFLNBQ8N5W9 214 aa6.71□□□□□ -1.34
MSH6-211ENST00000606499 WDR31Q8NA23 367 aa6.71□□□□□ -1.34
MSH6-211ENST00000606499 OR10H5Q8NGA6 315 aa6.71□□□□□ -1.34
MSH6-211ENST00000606499 OR51G2Q8NGK0 314 aa6.71□□□□□ -1.34
MSH6-211ENST00000606499 OR6N2Q8NGY6 317 aa6.71□□□□□ -1.34
MSH6-211ENST00000606499 FBLIM1Q8WUP2 373 aa6.71□□□□□ -1.34
MSH6-211ENST00000606499 RFKQ969G6 155 aa6.71□□□□□ -1.34
MSH6-211ENST00000606499 LRRC46Q96FV0 321 aa6.71□□□□□ -1.34
MSH6-211ENST00000606499 ZC3HAV1LQ96H79 300 aaKnown RBP6.71□□□□□ -1.34
MSH6-211ENST00000606499 BOD1Q96IK1 185 aa6.71□□□□□ -1.34
MSH6-211ENST00000606499 INTS14Q96SY0 518 aa6.71□□□□□ -1.34
MSH6-211ENST00000606499 CNN2Q99439 309 aaKnown RBP6.71□□□□□ -1.34
MSH6-211ENST00000606499 RHNO1Q9BSD3 238 aa6.71□□□□□ -1.34
MSH6-211ENST00000606499 MED18Q9BUE0 208 aa6.71□□□□□ -1.34
MSH6-211ENST00000606499 C1QTNF6Q9BXI9 259 aa6.71□□□□□ -1.34
MSH6-211ENST00000606499 HDHD5Q9BXW7 423 aa6.71□□□□□ -1.34
MSH6-211ENST00000606499 MARCH7Q9H992 704 aa6.71□□□□□ -1.34
MSH6-211ENST00000606499 AMBNQ9NP70 447 aa6.71□□□□□ -1.34
MSH6-211ENST00000606499 H2AFY2Q9P0M6 372 aaPredicted RBP6.71□□□□□ -1.34
MSH6-211ENST00000606499 MOKQ9UQ07 419 aa6.71□□□□□ -1.34
MSH6-211ENST00000606499 POLR1DQ9Y2S0 133 aa6.71□□□□□ -1.34
MSH6-211ENST00000606499 KLHDC2Q9Y2U9 406 aa6.71□□□□□ -1.34
MSH6-211ENST00000606499 LHFPL6Q9Y693 200 aa6.71□□□□□ -1.34
MSH6-211ENST00000606499 HSPE1-MOB4S4R3N1 261 aa6.71□□□□□ -1.34
MSH6-211ENST00000606499 ALPK2Q86TB3 2170 aa6.71□□□□□ -1.34
MSH6-211ENST00000606499 ANKHD1Q8IWZ3 2542 aaKnown RBP6.71□□□□□ -1.34
MSH6-211ENST00000606499 ARPC4-TTLL3A0A0A6YYG9 625 aa6.7□□□□□ -1.34
MSH6-211ENST00000606499 C12orf71A8MTZ7 269 aa6.7□□□□□ -1.34
MSH6-211ENST00000606499 PRSS44E7EML9 344 aa6.7□□□□□ -1.34
MSH6-211ENST00000606499 XPNPEP2O43895 674 aa6.7□□□□□ -1.34
MSH6-211ENST00000606499 UBL3O95164 117 aa6.7□□□□□ -1.34
MSH6-211ENST00000606499 FARS2O95363 451 aaKnown RBP6.7□□□□□ -1.34
MSH6-211ENST00000606499 HRGP04196 525 aa6.7□□□□□ -1.34
MSH6-211ENST00000606499 CELA3BP08861 270 aa6.7□□□□□ -1.34
MSH6-211ENST00000606499 CST2P09228 141 aa6.7□□□□□ -1.34
MSH6-211ENST00000606499 MMP7P09237 267 aaPredicted RBP6.7□□□□□ -1.34
MSH6-211ENST00000606499 ZNF823P16415 610 aa6.7□□□□□ -1.34
MSH6-211ENST00000606499 ZNF32P17041 273 aa6.7□□□□□ -1.34
MSH6-211ENST00000606499 IGFBP2P18065 325 aa6.7□□□□□ -1.34
MSH6-211ENST00000606499 MTNR1AP48039 350 aa6.7□□□□□ -1.34
MSH6-211ENST00000606499 ENTPD1P49961 510 aa6.7□□□□□ -1.34
MSH6-211ENST00000606499 ZNF83P51522 516 aa6.7□□□□□ -1.34
MSH6-211ENST00000606499 BLVRAP53004 296 aa6.7□□□□□ -1.34
MSH6-211ENST00000606499 HCCSP53701 268 aa6.7□□□□□ -1.34
MSH6-211ENST00000606499 LSM6P62312 80 aaKnown RBP6.7□□□□□ -1.34
MSH6-211ENST00000606499 AQP6Q13520 282 aa6.7□□□□□ -1.34
MSH6-211ENST00000606499 PPA1Q15181 289 aa6.7□□□□□ -1.34
MSH6-211ENST00000606499 GSG1Q2KHT4 349 aa6.7□□□□□ -1.34
MSH6-211ENST00000606499 TIMM23BQ5SRD1 257 aa6.7□□□□□ -1.34
MSH6-211ENST00000606499 KRT80Q6KB66 452 aa6.7□□□□□ -1.34
MSH6-211ENST00000606499 SLC18B1Q6NT16 456 aa6.7□□□□□ -1.34
MSH6-211ENST00000606499 TMEM154Q6P9G4 183 aa6.7□□□□□ -1.34
MSH6-211ENST00000606499 CFAP77Q6ZQR2 320 aa6.7□□□□□ -1.34
MSH6-211ENST00000606499 DPY19L4Q7Z388 723 aa6.7□□□□□ -1.34
MSH6-211ENST00000606499 MDP1Q86V88 176 aa6.7□□□□□ -1.34
MSH6-211ENST00000606499 WFDC8Q8IUA0 241 aa6.7□□□□□ -1.34
MSH6-211ENST00000606499 OR4F15Q8NGB8 312 aa6.7□□□□□ -1.34
MSH6-211ENST00000606499 AKR7LQ8NHP1 331 aa6.7□□□□□ -1.34
MSH6-211ENST00000606499 LINC01560Q8TB33 94 aa6.7□□□□□ -1.34
MSH6-211ENST00000606499 RNFT2Q96EX2 444 aa6.7□□□□□ -1.34
MSH6-211ENST00000606499 Q96MT0 163 aa6.7□□□□□ -1.34
MSH6-211ENST00000606499 WFIKKN1Q96NZ8 548 aa6.7□□□□□ -1.34
MSH6-211ENST00000606499 AMELYQ99218 206 aa6.7□□□□□ -1.34
MSH6-211ENST00000606499 TBX5Q99593 518 aa6.7□□□□□ -1.34
MSH6-211ENST00000606499 TTTY10Q9BZA0 68 aa6.7□□□□□ -1.34
MSH6-211ENST00000606499 WNT5BQ9H1J7 359 aa6.7□□□□□ -1.34
MSH6-211ENST00000606499 Q9H521 79 aa6.7□□□□□ -1.34
MSH6-211ENST00000606499 ADGRL4Q9HBW9 690 aa6.7□□□□□ -1.34
MSH6-211ENST00000606499 CCNB1IP1Q9NPC3 277 aa6.7□□□□□ -1.34
MSH6-211ENST00000606499 B3GNT2Q9NY97 397 aa6.7□□□□□ -1.34
MSH6-211ENST00000606499 UBAP1Q9NZ09 502 aa6.7□□□□□ -1.34
MSH6-211ENST00000606499 NPAP1Q9NZP6 1156 aa6.7□□□□□ -1.34
MSH6-211ENST00000606499 WARS2Q9UGM6 360 aaKnown RBP6.7□□□□□ -1.34
MSH6-211ENST00000606499 CYB5R1Q9UHQ9 305 aa6.7□□□□□ -1.34
MSH6-211ENST00000606499 KCNG2Q9UJ96 466 aa6.7□□□□□ -1.34
MSH6-211ENST00000606499 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.7□□□□□ -1.349e-8■■■■□ 21.9
MSH6-211ENST00000606499 AMDHD2Q9Y303 409 aa6.7□□□□□ -1.34
MSH6-211ENST00000606499 SLC25A15Q9Y619 301 aa6.7□□□□□ -1.34
MSH6-211ENST00000606499 SPTAN1Q13813 2472 aaKnown RBP6.69□□□□□ -1.34
MSH6-211ENST00000606499 IGHV1-18A0A0C4DH31 117 aa6.69□□□□□ -1.34
MSH6-211ENST00000606499 TUBAL3A6NHL2 446 aa6.69□□□□□ -1.34
MSH6-211ENST00000606499 SLC1A7O00341 560 aa6.69□□□□□ -1.34
MSH6-211ENST00000606499 ZNF593O00488 134 aaPredicted RBP6.69□□□□□ -1.34
MSH6-211ENST00000606499 RER1O15258 196 aa6.69□□□□□ -1.34
MSH6-211ENST00000606499 DENRO43583 198 aaKnown RBP6.69□□□□□ -1.34
MSH6-211ENST00000606499 FAM20BO75063 409 aa6.69□□□□□ -1.34
MSH6-211ENST00000606499 SBK2P0C263 348 aa6.69□□□□□ -1.34
MSH6-211ENST00000606499 PPP3CBP16298 524 aa6.69□□□□□ -1.34
MSH6-211ENST00000606499 IDH3GP51553 393 aaPredicted RBP6.69□□□□□ -1.34
MSH6-211ENST00000606499 RAB1AP62820 205 aa6.69□□□□□ -1.34
MSH6-211ENST00000606499 PSG4Q00888 419 aa6.69□□□□□ -1.34
MSH6-211ENST00000606499 EIF2B1Q14232 305 aaKnown RBP6.69□□□□□ -1.34
MSH6-211ENST00000606499 PCK2Q16822 640 aa6.69□□□□□ -1.34
MSH6-211ENST00000606499 SLC36A2Q495M3 483 aa6.69□□□□□ -1.34
MSH6-211ENST00000606499 PABPC1L2AQ5JQF8 200 aa6.69□□□□□ -1.34
MSH6-211ENST00000606499 TEX30Q5JUR7 227 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms