RNA–Protein interactions for RNA: ENST00000606066.1

CTSA-211, Transcript of cathepsin A, humanhuman

TSL 5

Gene CTSA, Length 603 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-211ENST00000606066 RAB39AQ14964 217 aa12.39□□□□□ -0.43
CTSA-211ENST00000606066 SNAPC1Q16533 368 aa12.39□□□□□ -0.43
CTSA-211ENST00000606066 ZNF672Q499Z4 452 aaPredicted RBP12.39□□□□□ -0.43
CTSA-211ENST00000606066 CBR4Q8N4T8 237 aa12.39□□□□□ -0.43
CTSA-211ENST00000606066 KBTBD8Q8NFY9 601 aa12.39□□□□□ -0.43
CTSA-211ENST00000606066 OR10H5Q8NGA6 315 aa12.39□□□□□ -0.43
CTSA-211ENST00000606066 OR4F15Q8NGB8 312 aa12.39□□□□□ -0.43
CTSA-211ENST00000606066 OR1J2Q8NGS2 313 aa12.39□□□□□ -0.43
CTSA-211ENST00000606066 C11orf40Q8WZ69 217 aa12.39□□□□□ -0.43
CTSA-211ENST00000606066 FBXW5Q969U6 566 aa12.39□□□□□ -0.43
CTSA-211ENST00000606066 OTULINQ96BN8 352 aa12.39□□□□□ -0.43
CTSA-211ENST00000606066 FBXO17Q96EF6 278 aa12.39□□□□□ -0.43
CTSA-211ENST00000606066 ZNF75AQ96N20 296 aa12.39□□□□□ -0.43
CTSA-211ENST00000606066 FOXN4Q96NZ1 517 aa12.39□□□□□ -0.43
CTSA-211ENST00000606066 CDADC1Q9BWV3 514 aa12.39□□□□□ -0.43
CTSA-211ENST00000606066 FN3KQ9H479 309 aa12.39□□□□□ -0.43
CTSA-211ENST00000606066 NOX3Q9HBY0 568 aa12.39□□□□□ -0.43
CTSA-211ENST00000606066 EMC7Q9NPA0 242 aa12.39□□□□□ -0.43
CTSA-211ENST00000606066 TVP23BQ9NYZ1 205 aa12.39□□□□□ -0.43
CTSA-211ENST00000606066 CISD1Q9NZ45 108 aaKnown RBP12.39□□□□□ -0.43
CTSA-211ENST00000606066 TMEFF2Q9UIK5 374 aaPredicted RBP12.39□□□□□ -0.43
CTSA-211ENST00000606066 MOKQ9UQ07 419 aa12.39□□□□□ -0.43
CTSA-211ENST00000606066 POLR1DQ9Y2S0 133 aa12.39□□□□□ -0.43
CTSA-211ENST00000606066 SPEF1Q9Y4P9 236 aa12.39□□□□□ -0.43
CTSA-211ENST00000606066 ATP23Q9Y6H3 246 aa12.39□□□□□ -0.43
CTSA-211ENST00000606066 ALPK2Q86TB3 2170 aa12.39□□□□□ -0.43
CTSA-211ENST00000606066 FAM171A2A8MVW0 826 aa12.38□□□□□ -0.43
CTSA-211ENST00000606066 VSTM5A8MXK1 200 aa12.38□□□□□ -0.43
CTSA-211ENST00000606066 SHISA9B4DS77 424 aa12.38□□□□□ -0.43
CTSA-211ENST00000606066 PRR23D1E9PI22 279 aaPredicted RBP12.38□□□□□ -0.43
CTSA-211ENST00000606066 EI24O14681 340 aa12.38□□□□□ -0.43
CTSA-211ENST00000606066 MPZL1O95297 269 aa12.38□□□□□ -0.43
CTSA-211ENST00000606066 ALPLP05186 524 aa12.38□□□□□ -0.43
CTSA-211ENST00000606066 SCG5P05408 212 aa12.38□□□□□ -0.43
CTSA-211ENST00000606066 CELA3BP08861 270 aa12.38□□□□□ -0.43
CTSA-211ENST00000606066 PRR23D2P0DMB1 279 aaPredicted RBP12.38□□□□□ -0.43
CTSA-211ENST00000606066 GAAP10253 952 aa12.38□□□□□ -0.43
CTSA-211ENST00000606066 CD99P14209 185 aa12.38□□□□□ -0.43
CTSA-211ENST00000606066 ZNF823P16415 610 aa12.38□□□□□ -0.43
CTSA-211ENST00000606066 APLNRP35414 380 aa12.38□□□□□ -0.43
CTSA-211ENST00000606066 TEKQ02763 1124 aa12.38□□□□□ -0.43
CTSA-211ENST00000606066 SPOCK1Q08629 439 aa12.38□□□□□ -0.43
CTSA-211ENST00000606066 ENDOGQ14249 297 aaKnown RBP12.38□□□□□ -0.43
CTSA-211ENST00000606066 RCN1Q15293 331 aa12.38□□□□□ -0.43
CTSA-211ENST00000606066 TBC1D28Q2M2D7 210 aa12.38□□□□□ -0.43
CTSA-211ENST00000606066 PABPC1L2AQ5JQF8 200 aa12.38□□□□□ -0.43
CTSA-211ENST00000606066 TMEM236Q5W0B7 351 aa12.38□□□□□ -0.43
CTSA-211ENST00000606066 UGT2A3Q6UWM9 527 aa12.38□□□□□ -0.43
CTSA-211ENST00000606066 ZBTB49Q6ZSB9 765 aa12.38□□□□□ -0.43
CTSA-211ENST00000606066 ZNF611Q8N823 705 aa12.38□□□□□ -0.43
CTSA-211ENST00000606066 SLC30A7Q8NEW0 376 aa12.38□□□□□ -0.43
CTSA-211ENST00000606066 SLC26A10Q8NG04 563 aa12.38□□□□□ -0.43
CTSA-211ENST00000606066 OR9Q1Q8NGQ5 310 aa12.38□□□□□ -0.43
CTSA-211ENST00000606066 MS4A3Q96HJ5 214 aa12.38□□□□□ -0.43
CTSA-211ENST00000606066 FOXC2Q99958 501 aa12.38□□□□□ -0.43
CTSA-211ENST00000606066 GABARAPL3Q9BY60 117 aa12.38□□□□□ -0.43
CTSA-211ENST00000606066 NMNAT2Q9BZQ4 307 aa12.38□□□□□ -0.43
CTSA-211ENST00000606066 RIBC2Q9H4K1 309 aa12.38□□□□□ -0.43
CTSA-211ENST00000606066 FAIMQ9NVQ4 179 aa12.38□□□□□ -0.43
CTSA-211ENST00000606066 KCNG2Q9UJ96 466 aa12.38□□□□□ -0.43
CTSA-211ENST00000606066 ACANP16112 2415 aa12.38□□□□□ -0.43
CTSA-211ENST00000606066 ZAR1LA6NP61 321 aa12.37□□□□□ -0.43
CTSA-211ENST00000606066 ATP6V1G2-DDX39BF2Z307 99 aa12.37□□□□□ -0.43
CTSA-211ENST00000606066 TMCC2O75069 709 aa12.37□□□□□ -0.43
CTSA-211ENST00000606066 RAF1P04049 648 aa12.37□□□□□ -0.43
CTSA-211ENST00000606066 ANPEPP15144 967 aa12.37□□□□□ -0.43
CTSA-211ENST00000606066 HOXB4P17483 251 aaPredicted RBP12.37□□□□□ -0.43
CTSA-211ENST00000606066 SPI1P17947 270 aa12.37□□□□□ -0.43
CTSA-211ENST00000606066 FMO3P31513 532 aa12.37□□□□□ -0.43
CTSA-211ENST00000606066 PYCR1P32322 319 aa12.37□□□□□ -0.43
CTSA-211ENST00000606066 PSG4Q00888 419 aa12.37□□□□□ -0.43
CTSA-211ENST00000606066 GALK2Q01415 458 aa12.37□□□□□ -0.43
CTSA-211ENST00000606066 KEAP1Q14145 624 aa12.37□□□□□ -0.43
CTSA-211ENST00000606066 SLX4IPQ5VYV7 408 aa12.37□□□□□ -0.43
CTSA-211ENST00000606066 PAMR1Q6UXH9 720 aa12.37□□□□□ -0.43
CTSA-211ENST00000606066 ZNF584Q8IVC4 421 aa12.37□□□□□ -0.43
CTSA-211ENST00000606066 GJC3Q8NFK1 279 aa12.37□□□□□ -0.43
CTSA-211ENST00000606066 LILRB1Q8NHL6 650 aaPredicted RBP12.37□□□□□ -0.43
CTSA-211ENST00000606066 NINJ1Q92982 152 aa12.37□□□□□ -0.43
CTSA-211ENST00000606066 OR2H1Q9GZK4 316 aa12.37□□□□□ -0.43
CTSA-211ENST00000606066 C8orf4Q9NR00 106 aa12.37□□□□□ -0.43
CTSA-211ENST00000606066 ASH2LQ9UBL3 628 aa12.37□□□□□ -0.43
CTSA-211ENST00000606066 ST6GALNAC2Q9UJ37 374 aa12.37□□□□□ -0.43
CTSA-211ENST00000606066 IGHV2OR16-5A0A0B4J2B6 119 aa12.36□□□□□ -0.43
CTSA-211ENST00000606066 FAM183AA6NL82 134 aa12.36□□□□□ -0.43
CTSA-211ENST00000606066 GPANK1O95872 356 aa12.36□□□□□ -0.43
CTSA-211ENST00000606066 TFP02787 698 aa12.36□□□□□ -0.43
CTSA-211ENST00000606066 GYPBP06028 91 aa12.36□□□□□ -0.43
CTSA-211ENST00000606066 ZNF35P13682 527 aa12.36□□□□□ -0.43
CTSA-211ENST00000606066 DNASE1P24855 282 aa12.36□□□□□ -0.43
CTSA-211ENST00000606066 STOMP27105 288 aa12.36□□□□□ -0.43
CTSA-211ENST00000606066 CALCRP30988 508 aa12.36□□□□□ -0.43
CTSA-211ENST00000606066 GDI2P50395 445 aaKnown RBP12.36□□□□□ -0.43
CTSA-211ENST00000606066 ELF3P78545 371 aaPredicted RBP12.36□□□□□ -0.43
CTSA-211ENST00000606066 ZNF544Q6NX49 715 aa12.36□□□□□ -0.43
CTSA-211ENST00000606066 PLBD1Q6P4A8 553 aa12.36□□□□□ -0.43
CTSA-211ENST00000606066 UNQ6126/PRO20091Q6UXV3 157 aa12.36□□□□□ -0.43
CTSA-211ENST00000606066 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.36□□□□□ -0.43
CTSA-211ENST00000606066 MYPOPQ86VE0 399 aaPredicted RBP12.36□□□□□ -0.43
CTSA-211ENST00000606066 NUP37Q8NFH4 326 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms