RNA–Protein interactions for RNA: ENST00000601919.5

SSBP4-212, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-212ENST00000601919 NAXEQ8NCW5 288 aa16.34■□□□□ 0.21
SSBP4-212ENST00000601919 GALNT11Q8NCW6 608 aa16.34■□□□□ 0.21
SSBP4-212ENST00000601919 THEM6Q8WUY1 208 aa16.34■□□□□ 0.21
SSBP4-212ENST00000601919 NABP1Q96AH0 204 aa16.34■□□□□ 0.21
SSBP4-212ENST00000601919 DMRTA2Q96SC8 542 aa16.34■□□□□ 0.21
SSBP4-212ENST00000601919 C1orf198Q9H425 327 aa16.34■□□□□ 0.21
SSBP4-212ENST00000601919 EMC7Q9NPA0 242 aa16.34■□□□□ 0.21
SSBP4-212ENST00000601919 TAS2R16Q9NYV7 291 aa16.34■□□□□ 0.21
SSBP4-212ENST00000601919 CLEC2DQ9UHP7 191 aa16.34■□□□□ 0.21
SSBP4-212ENST00000601919 CYB5R1Q9UHQ9 305 aa16.34■□□□□ 0.21
SSBP4-212ENST00000601919 COL6A6A6NMZ7 2263 aa16.34■□□□□ 0.21
SSBP4-212ENST00000601919 A0A0G2JNJ9 132 aa16.33■□□□□ 0.2
SSBP4-212ENST00000601919 DVL2O14641 736 aa16.33■□□□□ 0.2
SSBP4-212ENST00000601919 MSTNO14793 375 aa16.33■□□□□ 0.2
SSBP4-212ENST00000601919 TACSTD2P09758 323 aa16.33■□□□□ 0.2
SSBP4-212ENST00000601919 B4GALT1P15291 398 aa16.33■□□□□ 0.2
SSBP4-212ENST00000601919 JUNBP17275 347 aaPredicted RBP16.33■□□□□ 0.2
SSBP4-212ENST00000601919 MAP2K4P45985 399 aa16.33■□□□□ 0.2
SSBP4-212ENST00000601919 RPL5P46777 297 aaKnown RBP16.33■□□□□ 0.2
SSBP4-212ENST00000601919 HCCSP53701 268 aa16.33■□□□□ 0.2
SSBP4-212ENST00000601919 WNT4P56705 351 aa16.33■□□□□ 0.2
SSBP4-212ENST00000601919 ZNF85Q03923 595 aa16.33■□□□□ 0.2
SSBP4-212ENST00000601919 P2RY6Q15077 328 aa16.33■□□□□ 0.2
SSBP4-212ENST00000601919 NEDD8Q15843 81 aa16.33■□□□□ 0.2
SSBP4-212ENST00000601919 ANKRD16Q6P6B7 361 aa16.33■□□□□ 0.2
SSBP4-212ENST00000601919 ZNF322Q6U7Q0 402 aaPredicted RBP16.33■□□□□ 0.2
SSBP4-212ENST00000601919 FAM220AQ7Z4H9 259 aa16.33■□□□□ 0.2
SSBP4-212ENST00000601919 SYT9Q86SS6 491 aa16.33■□□□□ 0.2
SSBP4-212ENST00000601919 SYS1Q8N2H4 156 aa16.33■□□□□ 0.2
SSBP4-212ENST00000601919 GJC3Q8NFK1 279 aa16.33■□□□□ 0.2
SSBP4-212ENST00000601919 HAVCR2Q8TDQ0 301 aa16.33■□□□□ 0.2
SSBP4-212ENST00000601919 SMAP2Q8WU79 429 aaPredicted RBP16.33■□□□□ 0.2
SSBP4-212ENST00000601919 ZNF416Q9BWM5 594 aa16.33■□□□□ 0.2
SSBP4-212ENST00000601919 Q9UFV3 132 aa16.33■□□□□ 0.2
SSBP4-212ENST00000601919 RP1L1Q8IWN7 2480 aaPredicted RBP16.33■□□□□ 0.2
SSBP4-212ENST00000601919 A0A1B0GUH1 482 aa16.32■□□□□ 0.2
SSBP4-212ENST00000601919 CCL21O00585 134 aa16.32■□□□□ 0.2
SSBP4-212ENST00000601919 SULT1C4O75897 302 aa16.32■□□□□ 0.2
SSBP4-212ENST00000601919 PTHP01270 115 aa16.32■□□□□ 0.2
SSBP4-212ENST00000601919 MT-ND5P03915 603 aa16.32■□□□□ 0.2
SSBP4-212ENST00000601919 SCG5P05408 212 aa16.32■□□□□ 0.2
SSBP4-212ENST00000601919 KRT8P05787 483 aa16.32■□□□□ 0.2
SSBP4-212ENST00000601919 ADRA2AP08913 450 aa16.32■□□□□ 0.2
SSBP4-212ENST00000601919 MRPL28Q13084 256 aaKnown RBP16.32■□□□□ 0.2
SSBP4-212ENST00000601919 BLMHQ13867 455 aa16.32■□□□□ 0.2
SSBP4-212ENST00000601919 SPHARQ15513 63 aa16.32■□□□□ 0.2
SSBP4-212ENST00000601919 MED22Q15528 200 aa16.32■□□□□ 0.2
SSBP4-212ENST00000601919 SLC36A2Q495M3 483 aa16.32■□□□□ 0.2
SSBP4-212ENST00000601919 UBE2UQ5VVX9 321 aa16.32■□□□□ 0.2
SSBP4-212ENST00000601919 SLC16A14Q7RTX9 510 aa16.32■□□□□ 0.2
SSBP4-212ENST00000601919 DCXRQ7Z4W1 244 aa16.32■□□□□ 0.2
SSBP4-212ENST00000601919 CCDC36Q8IYA8 594 aa16.32■□□□□ 0.2
SSBP4-212ENST00000601919 LRRC18Q8N456 261 aa16.32■□□□□ 0.2
SSBP4-212ENST00000601919 ZNF610Q8N9Z0 462 aa16.32■□□□□ 0.2
SSBP4-212ENST00000601919 C1orf162Q8NEQ5 155 aaPredicted RBP16.32■□□□□ 0.2
SSBP4-212ENST00000601919 OR52N5Q8NH56 324 aa16.32■□□□□ 0.2
SSBP4-212ENST00000601919 ZNF649Q9BS31 505 aa16.32■□□□□ 0.2
SSBP4-212ENST00000601919 ABHD6Q9BV23 337 aa16.32■□□□□ 0.2
SSBP4-212ENST00000601919 MROQ9BYG7 248 aa16.32■□□□□ 0.2
SSBP4-212ENST00000601919 GALNT8Q9NY28 637 aa16.32■□□□□ 0.2
SSBP4-212ENST00000601919 ASH2LQ9UBL3 628 aa16.32■□□□□ 0.2
SSBP4-212ENST00000601919 GDF2Q9UK05 429 aaPredicted RBP16.32■□□□□ 0.2
SSBP4-212ENST00000601919 COPS3Q9UNS2 423 aa16.32■□□□□ 0.2
SSBP4-212ENST00000601919 BSNQ9UPA5 3926 aa16.32■□□□□ 0.2
SSBP4-212ENST00000601919 LHFPL6Q9Y693 200 aa16.32■□□□□ 0.2
SSBP4-212ENST00000601919 CIB4A0PJX0 185 aa16.31■□□□□ 0.2
SSBP4-212ENST00000601919 ITGA5P08648 1049 aa16.31■□□□□ 0.2
SSBP4-212ENST00000601919 HOXB1P14653 301 aaPredicted RBP16.31■□□□□ 0.2
SSBP4-212ENST00000601919 COX5AP20674 150 aa16.31■□□□□ 0.2
SSBP4-212ENST00000601919 BMP5P22003 454 aa16.31■□□□□ 0.2
SSBP4-212ENST00000601919 RPS27P42677 84 aaKnown RBP16.31■□□□□ 0.2
SSBP4-212ENST00000601919 SCRN3Q0VDG4 424 aa16.31■□□□□ 0.2
SSBP4-212ENST00000601919 MRPL49Q13405 166 aaKnown RBP16.31■□□□□ 0.2
SSBP4-212ENST00000601919 ENDOGQ14249 297 aaKnown RBP16.31■□□□□ 0.2
SSBP4-212ENST00000601919 CDONQ4KMG0 1287 aa16.31■□□□□ 0.2
SSBP4-212ENST00000601919 C9orf135Q5VTT2 229 aa16.31■□□□□ 0.2
SSBP4-212ENST00000601919 XAF1Q6GPH4 301 aa16.31■□□□□ 0.2
SSBP4-212ENST00000601919 OR7E24Q6IFN5 339 aa16.31■□□□□ 0.2
SSBP4-212ENST00000601919 MTFR2Q6P444 385 aa16.31■□□□□ 0.2
SSBP4-212ENST00000601919 DEGS2Q6QHC5 323 aa16.31■□□□□ 0.2
SSBP4-212ENST00000601919 KLHL24Q6TFL4 600 aa16.31■□□□□ 0.2
SSBP4-212ENST00000601919 RHOUQ7L0Q8 258 aa16.31■□□□□ 0.2
SSBP4-212ENST00000601919 MRGPRGQ86SM5 289 aa16.31■□□□□ 0.2
SSBP4-212ENST00000601919 LINC00346Q8IVM7 164 aa16.31■□□□□ 0.2
SSBP4-212ENST00000601919 GABRG1Q8N1C3 465 aa16.31■□□□□ 0.2
SSBP4-212ENST00000601919 OR1K1Q8NGR3 316 aa16.31■□□□□ 0.2
SSBP4-212ENST00000601919 NANOS1Q8WY41 292 aaKnown RBP16.31■□□□□ 0.2
SSBP4-212ENST00000601919 OPN3Q9H1Y3 402 aaPredicted RBP16.31■□□□□ 0.2
SSBP4-212ENST00000601919 IKZF2Q9UKS7 526 aa16.31■□□□□ 0.2
SSBP4-212ENST00000601919 POLEQ07864 2286 aa16.3■□□□□ 0.2
SSBP4-212ENST00000601919 METTL15A6NJ78 407 aa16.3■□□□□ 0.2
SSBP4-212ENST00000601919 B8ZZF3 427 aa16.3■□□□□ 0.2
SSBP4-212ENST00000601919 J3QLW9 94 aa16.3■□□□□ 0.2
SSBP4-212ENST00000601919 ZNF254O75437 659 aa16.3■□□□□ 0.2
SSBP4-212ENST00000601919 SEC14L2O76054 403 aa16.3■□□□□ 0.2
SSBP4-212ENST00000601919 TFAP2AP05549 437 aa16.3■□□□□ 0.2
SSBP4-212ENST00000601919 ZNF19P17023 458 aa16.3■□□□□ 0.2
SSBP4-212ENST00000601919 IGHV1-2P23083 117 aa16.3■□□□□ 0.2
SSBP4-212ENST00000601919 ROM1Q03395 351 aa16.3■□□□□ 0.2
SSBP4-212ENST00000601919 TLE1Q04724 770 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms