RNA–Protein interactions for RNA: ENST00000601341.5

VRK3-223, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VRK3, Length 1,777 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-223ENST00000601341 OR10A3P58181 314 aa10.45□□□□□ -0.74
VRK3-223ENST00000601341 RAC1P63000 192 aa10.45□□□□□ -0.74
VRK3-223ENST00000601341 MRPS10P82664 201 aaKnown RBP10.45□□□□□ -0.74
VRK3-223ENST00000601341 MYBPHQ13203 477 aa10.45□□□□□ -0.74
VRK3-223ENST00000601341 SGCBQ16585 318 aa10.45□□□□□ -0.74
VRK3-223ENST00000601341 HYAL4Q2M3T9 481 aa10.45□□□□□ -0.74
VRK3-223ENST00000601341 TMEM176BQ3YBM2 270 aaPredicted RBP10.45□□□□□ -0.74
VRK3-223ENST00000601341 ALG10Q5BKT4 473 aa10.45□□□□□ -0.74
VRK3-223ENST00000601341 UBE2NLQ5JXB2 153 aa10.45□□□□□ -0.74
VRK3-223ENST00000601341 FAM27D1Q5T7N8 215 aa10.45□□□□□ -0.74
VRK3-223ENST00000601341 LINC01590Q5TEZ4 76 aa10.45□□□□□ -0.74
VRK3-223ENST00000601341 INO80CQ6PI98 192 aaPredicted RBP10.45□□□□□ -0.74
VRK3-223ENST00000601341 SLC16A9Q7RTY1 509 aa10.45□□□□□ -0.74
VRK3-223ENST00000601341 GHDCQ8N2G8 530 aa10.45□□□□□ -0.74
VRK3-223ENST00000601341 YIPF7Q8N8F6 280 aa10.45□□□□□ -0.74
VRK3-223ENST00000601341 LRRC75AQ8NAA5 344 aa10.45□□□□□ -0.74
VRK3-223ENST00000601341 ZFP62Q8NB50 900 aaPredicted RBP10.45□□□□□ -0.74
VRK3-223ENST00000601341 DNAJA3Q96EY1 480 aa10.45□□□□□ -0.74
VRK3-223ENST00000601341 FYTTD1Q96QD9 318 aaKnown RBP10.45□□□□□ -0.74
VRK3-223ENST00000601341 ABHD1Q96SE0 405 aa10.45□□□□□ -0.74
VRK3-223ENST00000601341 TMEM246Q9BRR3 403 aa10.45□□□□□ -0.74
VRK3-223ENST00000601341 TMEM185BQ9H7F4 350 aa10.45□□□□□ -0.74
VRK3-223ENST00000601341 PAQR5Q9NXK6 330 aaPredicted RBP10.45□□□□□ -0.74
VRK3-223ENST00000601341 ZFHX4Q86UP3 3567 aa10.45□□□□□ -0.74
VRK3-223ENST00000601341 OR6C68A6NDL8 312 aa10.44□□□□□ -0.74
VRK3-223ENST00000601341 LIPT2A6NK58 231 aa10.44□□□□□ -0.74
VRK3-223ENST00000601341 AIPO00170 330 aa10.44□□□□□ -0.74
VRK3-223ENST00000601341 PHYHO14832 338 aa10.44□□□□□ -0.74
VRK3-223ENST00000601341 GLSO94925 669 aaPredicted RBP10.44□□□□□ -0.74
VRK3-223ENST00000601341 HPNP05981 417 aa10.44□□□□□ -0.74
VRK3-223ENST00000601341 ATF1P18846 271 aa10.44□□□□□ -0.74
VRK3-223ENST00000601341 EDNRAP25101 427 aa10.44□□□□□ -0.74
VRK3-223ENST00000601341 SFTPDP35247 375 aa10.44□□□□□ -0.74
VRK3-223ENST00000601341 MNDAP41218 407 aa10.44□□□□□ -0.74
VRK3-223ENST00000601341 B3GALT5-AS1P59052 145 aa10.44□□□□□ -0.74
VRK3-223ENST00000601341 RPL18Q07020 188 aaKnown RBP10.44□□□□□ -0.74
VRK3-223ENST00000601341 OR7A5Q15622 319 aa10.44□□□□□ -0.74
VRK3-223ENST00000601341 SLC36A2Q495M3 483 aa10.44□□□□□ -0.74
VRK3-223ENST00000601341 TP53I3Q53FA7 332 aa10.44□□□□□ -0.74
VRK3-223ENST00000601341 IGFL3Q6UXB1 125 aa10.44□□□□□ -0.74
VRK3-223ENST00000601341 RPTNQ6XPR3 784 aa10.44□□□□□ -0.74
VRK3-223ENST00000601341 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.44□□□□□ -0.74
VRK3-223ENST00000601341 ZADH2Q8N4Q0 377 aa10.44□□□□□ -0.74
VRK3-223ENST00000601341 EXD3Q8N9H8 876 aa10.44□□□□□ -0.74
VRK3-223ENST00000601341 MOSPD2Q8NHP6 518 aa10.44□□□□□ -0.74
VRK3-223ENST00000601341 SMIM4Q8WVI0 70 aa10.44□□□□□ -0.74
VRK3-223ENST00000601341 SLC39A7Q92504 469 aa10.44□□□□□ -0.74
VRK3-223ENST00000601341 RELTQ969Z4 430 aa10.44□□□□□ -0.74
VRK3-223ENST00000601341 HYLS1Q96M11 299 aa10.44□□□□□ -0.74
VRK3-223ENST00000601341 SFXN2Q96NB2 322 aa10.44□□□□□ -0.74
VRK3-223ENST00000601341 OR5B2Q96R09 309 aa10.44□□□□□ -0.74
VRK3-223ENST00000601341 OR2M2Q96R28 347 aa10.44□□□□□ -0.74
VRK3-223ENST00000601341 PLEKHA1Q9HB21 404 aa10.44□□□□□ -0.74
VRK3-223ENST00000601341 ACOXLQ9NUZ1 547 aa10.44□□□□□ -0.74
VRK3-223ENST00000601341 ADAM18Q9Y3Q7 739 aa10.44□□□□□ -0.74
VRK3-223ENST00000601341 TMEM14AQ9Y6G1 99 aa10.44□□□□□ -0.74
VRK3-223ENST00000601341 EML6Q6ZMW3 1958 aa10.44□□□□□ -0.74
VRK3-223ENST00000601341 A0A1W2PRG6 482 aa10.44□□□□□ -0.74
VRK3-223ENST00000601341 OR6A2O95222 327 aa10.44□□□□□ -0.74
VRK3-223ENST00000601341 OPN1LWP04000 364 aa10.44□□□□□ -0.74
VRK3-223ENST00000601341 RAF1P04049 648 aa10.44□□□□□ -0.74
VRK3-223ENST00000601341 SRMP19623 302 aa10.44□□□□□ -0.74
VRK3-223ENST00000601341 CFPP27918 469 aa10.44□□□□□ -0.74
VRK3-223ENST00000601341 BTCP35070 178 aa10.44□□□□□ -0.74
VRK3-223ENST00000601341 RFC3P40938 356 aa10.44□□□□□ -0.74
VRK3-223ENST00000601341 TMPRSS3P57727 454 aa10.44□□□□□ -0.74
VRK3-223ENST00000601341 PPIAP62937 165 aaKnown RBP10.44□□□□□ -0.74
VRK3-223ENST00000601341 CD83Q01151 205 aa10.44□□□□□ -0.74
VRK3-223ENST00000601341 SLC25A35Q3KQZ1 300 aa10.44□□□□□ -0.74
VRK3-223ENST00000601341 GXYLT1Q4G148 440 aa10.44□□□□□ -0.74
VRK3-223ENST00000601341 WIPI1Q5MNZ9 446 aaPredicted RBP10.44□□□□□ -0.74
VRK3-223ENST00000601341 TMPPEQ6ZT21 453 aa10.44□□□□□ -0.74
VRK3-223ENST00000601341 H1FNTQ75WM6 255 aaPredicted RBP10.44□□□□□ -0.74
VRK3-223ENST00000601341 JAZF1Q86VZ6 243 aa10.44□□□□□ -0.74
VRK3-223ENST00000601341 TOMM5Q8N4H5 51 aa10.44□□□□□ -0.74
VRK3-223ENST00000601341 TMEM251Q8N6I4 163 aa10.44□□□□□ -0.74
VRK3-223ENST00000601341 ZNF417Q8TAU3 575 aa10.44□□□□□ -0.74
VRK3-223ENST00000601341 RAB40AQ8WXH6 277 aa10.44□□□□□ -0.74
VRK3-223ENST00000601341 YIPF5Q969M3 257 aa10.44□□□□□ -0.74
VRK3-223ENST00000601341 MIB2Q96AX9 1013 aa10.44□□□□□ -0.74
VRK3-223ENST00000601341 ZNF587Q96SQ5 575 aaPredicted RBP10.44□□□□□ -0.74
VRK3-223ENST00000601341 NMNAT3Q96T66 252 aa10.44□□□□□ -0.74
VRK3-223ENST00000601341 ALG12Q9BV10 488 aa10.44□□□□□ -0.74
VRK3-223ENST00000601341 ALKBH4Q9NXW9 302 aa10.44□□□□□ -0.74
VRK3-223ENST00000601341 TAS2R5Q9NYW4 299 aa10.44□□□□□ -0.74
VRK3-223ENST00000601341 GNG8Q9UK08 70 aa10.44□□□□□ -0.74
VRK3-223ENST00000601341 B3GALT5Q9Y2C3 310 aa10.44□□□□□ -0.74
VRK3-223ENST00000601341 RAXQ9Y2V3 346 aa10.44□□□□□ -0.74
VRK3-223ENST00000601341 CSAG2Q9Y5P2 127 aa10.44□□□□□ -0.74
VRK3-223ENST00000601341 URB1O60287 2271 aaKnown RBP10.43□□□□□ -0.74
VRK3-223ENST00000601341 CFAP47Q6ZTR5 3102 aa10.43□□□□□ -0.74
VRK3-223ENST00000601341 NAP1L6A6NFF2 107 aa10.43□□□□□ -0.74
VRK3-223ENST00000601341 FAM166BA8MTA8 275 aa10.43□□□□□ -0.74
VRK3-223ENST00000601341 MKRN2OSH3BPM6 223 aa10.43□□□□□ -0.74
VRK3-223ENST00000601341 ACOT7O00154 380 aa10.43□□□□□ -0.74
VRK3-223ENST00000601341 SULT2B1O00204 365 aa10.43□□□□□ -0.74
VRK3-223ENST00000601341 PLPP3O14495 311 aa10.43□□□□□ -0.74
VRK3-223ENST00000601341 ECDO95905 644 aaPredicted RBP10.43□□□□□ -0.74
VRK3-223ENST00000601341 PAHP00439 452 aa10.43□□□□□ -0.74
VRK3-223ENST00000601341 CALCBP10092 127 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms