RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 ZNF627Q7L945 461 aa18.16■□□□□ 0.5
SHKBP1-225ENST00000600733 GPR119Q8TDV5 335 aa18.16■□□□□ 0.5
SHKBP1-225ENST00000600733 GPX8Q8TED1 209 aa18.16■□□□□ 0.5
SHKBP1-225ENST00000600733 DAZLQ92904 295 aaKnown RBP18.16■□□□□ 0.5
SHKBP1-225ENST00000600733 NPAS1Q99742 590 aa18.16■□□□□ 0.5
SHKBP1-225ENST00000600733 ZMAT3Q9HA38 289 aaKnown RBP18.16■□□□□ 0.5
SHKBP1-225ENST00000600733 APMAPQ9HDC9 416 aa18.16■□□□□ 0.5
SHKBP1-225ENST00000600733 CKLFQ9UBR5 152 aa18.16■□□□□ 0.5
SHKBP1-225ENST00000600733 COPS7AQ9UBW8 275 aa18.16■□□□□ 0.5
SHKBP1-225ENST00000600733 MRPS18BQ9Y676 258 aaKnown RBP18.16■□□□□ 0.5
SHKBP1-225ENST00000600733 COL5A1P20908 1838 aaPredicted RBP18.16■□□□□ 0.5
SHKBP1-225ENST00000600733 SPAG17Q6Q759 2223 aa18.16■□□□□ 0.5
SHKBP1-225ENST00000600733 LOC105371267A0A1B0GV96 52 aa18.16■□□□□ 0.5
SHKBP1-225ENST00000600733 A0A1W2PPC1 479 aa18.16■□□□□ 0.5
SHKBP1-225ENST00000600733 DCDC2BA2VCK2 349 aa18.16■□□□□ 0.5
SHKBP1-225ENST00000600733 OR6C65A6NJZ3 312 aa18.16■□□□□ 0.5
SHKBP1-225ENST00000600733 POM121CA8CG34 1229 aa18.16■□□□□ 0.5
SHKBP1-225ENST00000600733 F5H5P2 479 aa18.16■□□□□ 0.5
SHKBP1-225ENST00000600733 TO15178 435 aa18.16■□□□□ 0.5
SHKBP1-225ENST00000600733 HTR2CP28335 458 aa18.16■□□□□ 0.5
SHKBP1-225ENST00000600733 ARL4DP49703 201 aa18.16■□□□□ 0.5
SHKBP1-225ENST00000600733 MAP2K6P52564 334 aa18.16■□□□□ 0.5
SHKBP1-225ENST00000600733 C16orf47Q6ZP98 133 aaPredicted RBP18.16■□□□□ 0.5
SHKBP1-225ENST00000600733 SHISA6Q6ZSJ9 500 aa18.16■□□□□ 0.5
SHKBP1-225ENST00000600733 LANCL3Q6ZV70 420 aa18.16■□□□□ 0.5
SHKBP1-225ENST00000600733 SLC29A4Q7RTT9 530 aa18.16■□□□□ 0.5
SHKBP1-225ENST00000600733 GLRX5Q86SX6 157 aa18.16■□□□□ 0.5
SHKBP1-225ENST00000600733 GABRG1Q8N1C3 465 aa18.16■□□□□ 0.5
SHKBP1-225ENST00000600733 FAM174AQ8TBP5 190 aa18.16■□□□□ 0.5
SHKBP1-225ENST00000600733 SLC25A44Q96H78 314 aaPredicted RBP18.16■□□□□ 0.5
SHKBP1-225ENST00000600733 KIF25Q9UIL4 384 aa18.16■□□□□ 0.5
SHKBP1-225ENST00000600733 MKL2Q9ULH7 1088 aa18.16■□□□□ 0.5
SHKBP1-225ENST00000600733 EMC9Q9Y3B6 208 aa18.16■□□□□ 0.5
SHKBP1-225ENST00000600733 CD2P06729 351 aa18.15■□□□□ 0.5
SHKBP1-225ENST00000600733 FBLP22087 321 aaKnown RBP18.15■□□□□ 0.5
SHKBP1-225ENST00000600733 TMUB2Q71RG4 321 aa18.15■□□□□ 0.5
SHKBP1-225ENST00000600733 SYT13Q7L8C5 426 aa18.15■□□□□ 0.5
SHKBP1-225ENST00000600733 OR1N1Q8NGS0 311 aa18.15■□□□□ 0.5
SHKBP1-225ENST00000600733 OR52N5Q8NH56 324 aa18.15■□□□□ 0.5
SHKBP1-225ENST00000600733 SEH1LQ96EE3 360 aa18.15■□□□□ 0.5
SHKBP1-225ENST00000600733 CXorf58Q96LI9 332 aa18.15■□□□□ 0.5
SHKBP1-225ENST00000600733 ARL6Q9H0F7 186 aa18.15■□□□□ 0.5
SHKBP1-225ENST00000600733 ZNF304Q9HCX3 659 aa18.15■□□□□ 0.5
SHKBP1-225ENST00000600733 PRMT8Q9NR22 394 aaPredicted RBP18.15■□□□□ 0.5
SHKBP1-225ENST00000600733 SLC2A4RGQ9NR83 387 aa18.15■□□□□ 0.5
SHKBP1-225ENST00000600733 SLC17A5Q9NRA2 495 aa18.15■□□□□ 0.5
SHKBP1-225ENST00000600733 ABCA7Q8IZY2 2146 aa18.15■□□□□ 0.5
SHKBP1-225ENST00000600733 C2orf72A6NCS6 295 aa18.15■□□□□ 0.5
SHKBP1-225ENST00000600733 M0QYG6 137 aa18.15■□□□□ 0.5
SHKBP1-225ENST00000600733 SOX1O00570 391 aaPredicted RBP18.15■□□□□ 0.5
SHKBP1-225ENST00000600733 FADS1O60427 444 aa18.15■□□□□ 0.5
SHKBP1-225ENST00000600733 CD27P26842 260 aa18.15■□□□□ 0.5
SHKBP1-225ENST00000600733 PNLIPRP2P54317 469 aa18.15■□□□□ 0.5
SHKBP1-225ENST00000600733 HSD11B2P80365 405 aa18.15■□□□□ 0.5
SHKBP1-225ENST00000600733 GLO1Q04760 184 aa18.15■□□□□ 0.5
SHKBP1-225ENST00000600733 FMODQ06828 376 aa18.15■□□□□ 0.5
SHKBP1-225ENST00000600733 C14orf28Q4W4Y0 310 aa18.15■□□□□ 0.5
SHKBP1-225ENST00000600733 GLT8D1Q68CQ7 371 aa18.15■□□□□ 0.5
SHKBP1-225ENST00000600733 OR10K2Q6IF99 312 aa18.15■□□□□ 0.5
SHKBP1-225ENST00000600733 C11orf88Q6PI97 169 aa18.15■□□□□ 0.5
SHKBP1-225ENST00000600733 GRINAQ7Z429 371 aa18.15■□□□□ 0.5
SHKBP1-225ENST00000600733 WDFY1Q8IWB7 410 aa18.15■□□□□ 0.5
SHKBP1-225ENST00000600733 MVB12AQ96EY5 273 aa18.15■□□□□ 0.5
SHKBP1-225ENST00000600733 VN1R1Q9GZP7 353 aa18.15■□□□□ 0.5
SHKBP1-225ENST00000600733 POFUT1Q9H488 388 aa18.15■□□□□ 0.5
SHKBP1-225ENST00000600733 AHSA1O95433 338 aa18.14■□□□□ 0.49
SHKBP1-225ENST00000600733 FOLR1P15328 257 aa18.14■□□□□ 0.49
SHKBP1-225ENST00000600733 CFHR1Q03591 330 aa18.14■□□□□ 0.49
SHKBP1-225ENST00000600733 SPOCK1Q08629 439 aa18.14■□□□□ 0.49
SHKBP1-225ENST00000600733 TSSK4Q6SA08 328 aa18.14■□□□□ 0.49
SHKBP1-225ENST00000600733 COQ8AQ8NI60 647 aa18.14■□□□□ 0.49
SHKBP1-225ENST00000600733 hCG_1807616A0A1W2PRN6 198 aa18.14■□□□□ 0.49
SHKBP1-225ENST00000600733 TUBAL3A6NHL2 446 aa18.14■□□□□ 0.49
SHKBP1-225ENST00000600733 TTLL8A6PVC2 850 aa18.14■□□□□ 0.49
SHKBP1-225ENST00000600733 HMSDA8MTL9 139 aa18.14■□□□□ 0.49
SHKBP1-225ENST00000600733 LMO7DNF2Z398 122 aa18.14■□□□□ 0.49
SHKBP1-225ENST00000600733 LMX1BO60663 402 aa18.14■□□□□ 0.49
SHKBP1-225ENST00000600733 RP2O75695 350 aa18.14■□□□□ 0.49
SHKBP1-225ENST00000600733 IGFBP3P17936 291 aaPredicted RBP18.14■□□□□ 0.49
SHKBP1-225ENST00000600733 ACTBP60709 375 aa18.14■□□□□ 0.49
SHKBP1-225ENST00000600733 ACTG1P63261 375 aa18.14■□□□□ 0.49
SHKBP1-225ENST00000600733 LRFN4Q6PJG9 635 aa18.14■□□□□ 0.49
SHKBP1-225ENST00000600733 LINC00346Q8IVM7 164 aa18.14■□□□□ 0.49
SHKBP1-225ENST00000600733 GALNT16Q8N428 558 aa18.14■□□□□ 0.49
SHKBP1-225ENST00000600733 OR13C3Q8NGS6 347 aa18.14■□□□□ 0.49
SHKBP1-225ENST00000600733 SLC41A2Q96JW4 573 aa18.14■□□□□ 0.49
SHKBP1-225ENST00000600733 REG4Q9BYZ8 158 aa18.14■□□□□ 0.49
SHKBP1-225ENST00000600733 TINAGL1Q9GZM7 467 aaPredicted RBP18.14■□□□□ 0.49
SHKBP1-225ENST00000600733 IGHV3-20A0A0C4DH32 117 aa18.13■□□□□ 0.49
SHKBP1-225ENST00000600733 SRSF10O75494 262 aaKnown RBP18.13■□□□□ 0.49
SHKBP1-225ENST00000600733 ITGB2P05107 769 aa18.13■□□□□ 0.49
SHKBP1-225ENST00000600733 LPLP06858 475 aa18.13■□□□□ 0.49
SHKBP1-225ENST00000600733 NMBP08949 121 aa18.13■□□□□ 0.49
SHKBP1-225ENST00000600733 MOGAT2Q3SYC2 334 aa18.13■□□□□ 0.49
SHKBP1-225ENST00000600733 JAGN1Q8N5M9 183 aa18.13■□□□□ 0.49
SHKBP1-225ENST00000600733 STK35Q8TDR2 534 aa18.13■□□□□ 0.49
SHKBP1-225ENST00000600733 CMKLR1Q99788 373 aa18.13■□□□□ 0.49
SHKBP1-225ENST00000600733 MESP1Q9BRJ9 268 aa18.13■□□□□ 0.49
SHKBP1-225ENST00000600733 RAB33BQ9H082 229 aa18.13■□□□□ 0.49
SHKBP1-225ENST00000600733 SDHAF2Q9NX18 166 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms