RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 PEX19P40855 299 aa17.44■□□□□ 0.38
SHKBP1-222ENST00000600320 ZNF83P51522 516 aa17.44■□□□□ 0.38
SHKBP1-222ENST00000600320 CDH11P55287 796 aa17.44■□□□□ 0.38
SHKBP1-222ENST00000600320 ISL1P61371 349 aa17.44■□□□□ 0.38
SHKBP1-222ENST00000600320 IL18R1Q13478 541 aa17.44■□□□□ 0.38
SHKBP1-222ENST00000600320 OCLNQ16625 522 aa17.44■□□□□ 0.38
SHKBP1-222ENST00000600320 SLC25A30Q5SVS4 291 aa17.44■□□□□ 0.38
SHKBP1-222ENST00000600320 LINC00346Q8IVM7 164 aa17.44■□□□□ 0.38
SHKBP1-222ENST00000600320 TIGD4Q8IY51 512 aa17.44■□□□□ 0.38
SHKBP1-222ENST00000600320 CCDC36Q8IYA8 594 aa17.44■□□□□ 0.38
SHKBP1-222ENST00000600320 NANOS1Q8WY41 292 aaKnown RBP17.44■□□□□ 0.38
SHKBP1-222ENST00000600320 SPOCK3Q9BQ16 436 aa17.44■□□□□ 0.38
SHKBP1-222ENST00000600320 RASSF4Q9H2L5 321 aa17.44■□□□□ 0.38
SHKBP1-222ENST00000600320 H2AFY2Q9P0M6 372 aaPredicted RBP17.44■□□□□ 0.38
SHKBP1-222ENST00000600320 LHFPL6Q9Y693 200 aa17.44■□□□□ 0.38
SHKBP1-222ENST00000600320 SIAH2O43255 324 aa17.43■□□□□ 0.38
SHKBP1-222ENST00000600320 WBP4O75554 376 aaKnown RBP17.43■□□□□ 0.38
SHKBP1-222ENST00000600320 WNT11O96014 354 aa17.43■□□□□ 0.38
SHKBP1-222ENST00000600320 CELA3BP08861 270 aa17.43■□□□□ 0.38
SHKBP1-222ENST00000600320 CBR1P16152 277 aa17.43■□□□□ 0.38
SHKBP1-222ENST00000600320 HTR1FP30939 366 aa17.43■□□□□ 0.38
SHKBP1-222ENST00000600320 BLVRAP53004 296 aa17.43■□□□□ 0.38
SHKBP1-222ENST00000600320 RAB1AP62820 205 aa17.43■□□□□ 0.38
SHKBP1-222ENST00000600320 ADAM8P78325 824 aa17.43■□□□□ 0.38
SHKBP1-222ENST00000600320 GSG1Q2KHT4 349 aa17.43■□□□□ 0.38
SHKBP1-222ENST00000600320 SLC36A2Q495M3 483 aa17.43■□□□□ 0.38
SHKBP1-222ENST00000600320 CORO6Q6QEF8 472 aa17.43■□□□□ 0.38
SHKBP1-222ENST00000600320 MYPOPQ86VE0 399 aaPredicted RBP17.43■□□□□ 0.38
SHKBP1-222ENST00000600320 ERI1Q8IV48 349 aaKnown RBP17.43■□□□□ 0.38
SHKBP1-222ENST00000600320 GID4Q8IVV7 300 aa17.43■□□□□ 0.38
SHKBP1-222ENST00000600320 SETD9Q8NE22 299 aa17.43■□□□□ 0.38
SHKBP1-222ENST00000600320 OR10H5Q8NGA6 315 aa17.43■□□□□ 0.38
SHKBP1-222ENST00000600320 CNIH3Q8TBE1 160 aa17.43■□□□□ 0.38
SHKBP1-222ENST00000600320 FAM222BQ8WU58 562 aa17.43■□□□□ 0.38
SHKBP1-222ENST00000600320 SMAP2Q8WU79 429 aaPredicted RBP17.43■□□□□ 0.38
SHKBP1-222ENST00000600320 RNF121Q9H920 327 aa17.43■□□□□ 0.38
SHKBP1-222ENST00000600320 CCNB1IP1Q9NPC3 277 aa17.43■□□□□ 0.38
SHKBP1-222ENST00000600320 CRNNQ9UBG3 495 aaPredicted RBP17.43■□□□□ 0.38
SHKBP1-222ENST00000600320 ASH2LQ9UBL3 628 aa17.43■□□□□ 0.38
SHKBP1-222ENST00000600320 PLEKHB1Q9UF11 243 aaPredicted RBP17.43■□□□□ 0.38
SHKBP1-222ENST00000600320 POLR1DQ9Y2S0 133 aa17.43■□□□□ 0.38
SHKBP1-222ENST00000600320 PTPN13Q12923 2485 aa17.42■□□□□ 0.38
SHKBP1-222ENST00000600320 C12orf71A8MTZ7 269 aa17.42■□□□□ 0.38
SHKBP1-222ENST00000600320 MPZL2O60487 215 aa17.42■□□□□ 0.38
SHKBP1-222ENST00000600320 MRPL3P09001 348 aaKnown RBP17.42■□□□□ 0.38
SHKBP1-222ENST00000600320 EPXP11678 715 aa17.42■□□□□ 0.38
SHKBP1-222ENST00000600320 ZNF823P16415 610 aa17.42■□□□□ 0.38
SHKBP1-222ENST00000600320 CRYGSP22914 178 aa17.42■□□□□ 0.38
SHKBP1-222ENST00000600320 NAA10P41227 235 aaPredicted RBP17.42■□□□□ 0.38
SHKBP1-222ENST00000600320 ENTPD1P49961 510 aa17.42■□□□□ 0.38
SHKBP1-222ENST00000600320 PSG4Q00888 419 aa17.42■□□□□ 0.38
SHKBP1-222ENST00000600320 LCN1P1Q5VSP4 162 aa17.42■□□□□ 0.38
SHKBP1-222ENST00000600320 SLC18B1Q6NT16 456 aa17.42■□□□□ 0.38
SHKBP1-222ENST00000600320 DPPA2Q7Z7J5 298 aa17.42■□□□□ 0.38
SHKBP1-222ENST00000600320 C8orf59Q8N0T1 100 aaPredicted RBP17.42■□□□□ 0.38
SHKBP1-222ENST00000600320 AKR7LQ8NHP1 331 aa17.42■□□□□ 0.38
SHKBP1-222ENST00000600320 INTS14Q96SY0 518 aa17.42■□□□□ 0.38
SHKBP1-222ENST00000600320 OR2H1Q9GZK4 316 aa17.42■□□□□ 0.38
SHKBP1-222ENST00000600320 WNT5BQ9H1J7 359 aa17.42■□□□□ 0.38
SHKBP1-222ENST00000600320 KCNN2Q9H2S1 579 aa17.42■□□□□ 0.38
SHKBP1-222ENST00000600320 CLN6Q9NWW5 311 aa17.42■□□□□ 0.38
SHKBP1-222ENST00000600320 CYB5R1Q9UHQ9 305 aa17.42■□□□□ 0.38
SHKBP1-222ENST00000600320 LRRK2Q5S007 2527 aa17.41■□□□□ 0.38
SHKBP1-222ENST00000600320 SLC22A31A6NKX4 558 aa17.41■□□□□ 0.38
SHKBP1-222ENST00000600320 ZNF593O00488 134 aaPredicted RBP17.41■□□□□ 0.38
SHKBP1-222ENST00000600320 RER1O15258 196 aa17.41■□□□□ 0.38
SHKBP1-222ENST00000600320 IGKV3-15P01624 115 aa17.41■□□□□ 0.38
SHKBP1-222ENST00000600320 IGLV1-44P01699 117 aa17.41■□□□□ 0.38
SHKBP1-222ENST00000600320 SPARCP09486 303 aa17.41■□□□□ 0.38
SHKBP1-222ENST00000600320 HSPA13P48723 471 aa17.41■□□□□ 0.38
SHKBP1-222ENST00000600320 IDH3GP51553 393 aaPredicted RBP17.41■□□□□ 0.38
SHKBP1-222ENST00000600320 NUDT6P53370 316 aa17.41■□□□□ 0.38
SHKBP1-222ENST00000600320 AQP6Q13520 282 aa17.41■□□□□ 0.38
SHKBP1-222ENST00000600320 GGTLC2Q14390 218 aa17.41■□□□□ 0.38
SHKBP1-222ENST00000600320 RAB39AQ14964 217 aa17.41■□□□□ 0.38
SHKBP1-222ENST00000600320 SMN1Q16637 294 aaKnown RBP17.41■□□□□ 0.38
SHKBP1-222ENST00000600320 PCK2Q16822 640 aa17.41■□□□□ 0.38
SHKBP1-222ENST00000600320 CCDC92Q53HC0 331 aaPredicted RBP17.41■□□□□ 0.38
SHKBP1-222ENST00000600320 PABPC1L2AQ5JQF8 200 aa17.41■□□□□ 0.38
SHKBP1-222ENST00000600320 C1QTNF12Q5T7M4 302 aa17.41■□□□□ 0.38
SHKBP1-222ENST00000600320 MEDAGQ5VYS4 303 aa17.41■□□□□ 0.38
SHKBP1-222ENST00000600320 HIST2H2BCQ6DN03 193 aa17.41■□□□□ 0.38
SHKBP1-222ENST00000600320 LAIR2Q6ISS4 152 aa17.41■□□□□ 0.38
SHKBP1-222ENST00000600320 TMEM53Q6P2H8 277 aa17.41■□□□□ 0.38
SHKBP1-222ENST00000600320 CFAP77Q6ZQR2 320 aa17.41■□□□□ 0.38
SHKBP1-222ENST00000600320 SYT9Q86SS6 491 aa17.41■□□□□ 0.38
SHKBP1-222ENST00000600320 ZNF584Q8IVC4 421 aa17.41■□□□□ 0.38
SHKBP1-222ENST00000600320 OR6N2Q8NGY6 317 aa17.41■□□□□ 0.38
SHKBP1-222ENST00000600320 FBLIM1Q8WUP2 373 aa17.41■□□□□ 0.38
SHKBP1-222ENST00000600320 MS4A3Q96HJ5 214 aa17.41■□□□□ 0.38
SHKBP1-222ENST00000600320 ADGRL4Q9HBW9 690 aa17.41■□□□□ 0.38
SHKBP1-222ENST00000600320 WARS2Q9UGM6 360 aaKnown RBP17.41■□□□□ 0.38
SHKBP1-222ENST00000600320 HSPE1-MOB4S4R3N1 261 aa17.41■□□□□ 0.38
SHKBP1-222ENST00000600320 IGHV1-18A0A0C4DH31 117 aa17.4■□□□□ 0.38
SHKBP1-222ENST00000600320 DPRXA6NFQ7 191 aa17.4■□□□□ 0.38
SHKBP1-222ENST00000600320 DEFB108AA8MXU0 73 aa17.4■□□□□ 0.38
SHKBP1-222ENST00000600320 M0R1B8 84 aa17.4■□□□□ 0.38
SHKBP1-222ENST00000600320 APOL3O95236 402 aa17.4■□□□□ 0.38
SHKBP1-222ENST00000600320 RAB36O95755 333 aa17.4■□□□□ 0.38
SHKBP1-222ENST00000600320 ZNF14P17017 642 aaPredicted RBP17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms