RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 ELOVL3Q9HB03 270 aa13.49□□□□□ -0.25
VRK3-221ENST00000600284 SPAG4Q9NPE6 437 aa13.49□□□□□ -0.25
VRK3-221ENST00000600284 FAM32AQ9Y421 112 aaKnown RBP13.49□□□□□ -0.25
VRK3-221ENST00000600284 XKRYO14609 159 aa13.48□□□□□ -0.25
VRK3-221ENST00000600284 PTP4A3O75365 173 aa13.48□□□□□ -0.25
VRK3-221ENST00000600284 H1F0P07305 194 aaKnown RBP13.48□□□□□ -0.25
VRK3-221ENST00000600284 COX5BP10606 129 aa13.48□□□□□ -0.25
VRK3-221ENST00000600284 TUBG1P23258 451 aa13.48□□□□□ -0.25
VRK3-221ENST00000600284 WNT5AP41221 380 aa13.48□□□□□ -0.25
VRK3-221ENST00000600284 CCL8P80075 99 aa13.48□□□□□ -0.25
VRK3-221ENST00000600284 ENDOGQ14249 297 aaKnown RBP13.48□□□□□ -0.25
VRK3-221ENST00000600284 GLYATQ6IB77 296 aa13.48□□□□□ -0.25
VRK3-221ENST00000600284 FAM122BQ7Z309 247 aa13.48□□□□□ -0.25
VRK3-221ENST00000600284 GLCCI1Q86VQ1 547 aa13.48□□□□□ -0.25
VRK3-221ENST00000600284 MEX3DQ86XN8 651 aaKnown RBP13.48□□□□□ -0.25
VRK3-221ENST00000600284 ZNF101Q8IZC7 436 aa13.48□□□□□ -0.25
VRK3-221ENST00000600284 POLE4Q9NR33 117 aa13.48□□□□□ -0.25
VRK3-221ENST00000600284 TUBG2Q9NRH3 451 aa13.48□□□□□ -0.25
VRK3-221ENST00000600284 CYSLTR2Q9NS75 346 aa13.48□□□□□ -0.25
VRK3-221ENST00000600284 DECR2Q9NUI1 292 aa13.48□□□□□ -0.25
VRK3-221ENST00000600284 DCAF13Q9NV06 445 aaKnown RBP13.48□□□□□ -0.25
VRK3-221ENST00000600284 CGGBP1Q9UFW8 167 aaPredicted RBP13.48□□□□□ -0.25
VRK3-221ENST00000600284 NDRG4Q9ULP0 352 aaKnown RBP13.48□□□□□ -0.25
VRK3-221ENST00000600284 SAMD4AQ9UPU9 718 aaKnown RBP13.48□□□□□ -0.25
VRK3-221ENST00000600284 IGHV1-69-2A0A0G2JMI3 117 aa13.47□□□□□ -0.25
VRK3-221ENST00000600284 A0A1W2PPL8 197 aa13.47□□□□□ -0.25
VRK3-221ENST00000600284 GMNNO75496 209 aa13.47□□□□□ -0.25
VRK3-221ENST00000600284 NDUFB2O95178 105 aa13.47□□□□□ -0.25
VRK3-221ENST00000600284 ADH4P08319 380 aa13.47□□□□□ -0.25
VRK3-221ENST00000600284 ANPEPP15144 967 aa13.47□□□□□ -0.25
VRK3-221ENST00000600284 NCK1P16333 377 aa13.47□□□□□ -0.25
VRK3-221ENST00000600284 GPR4P46093 362 aa13.47□□□□□ -0.25
VRK3-221ENST00000600284 ZNF81P51508 661 aa13.47□□□□□ -0.25
VRK3-221ENST00000600284 MMP15P51511 669 aa13.47□□□□□ -0.25
VRK3-221ENST00000600284 ARHGDIAP52565 204 aa13.47□□□□□ -0.25
VRK3-221ENST00000600284 GPR139Q6DWJ6 353 aa13.47□□□□□ -0.25
VRK3-221ENST00000600284 SLC25A40Q8TBP6 338 aa13.47□□□□□ -0.25
VRK3-221ENST00000600284 KLF14Q8TD94 323 aaPredicted RBP13.47□□□□□ -0.25
VRK3-221ENST00000600284 C4orf45Q96LM5 186 aa13.47□□□□□ -0.25
VRK3-221ENST00000600284 GORASP2Q9H8Y8 452 aa13.47□□□□□ -0.25
VRK3-221ENST00000600284 KRCC1Q9NPI7 259 aaPredicted RBP13.47□□□□□ -0.25
VRK3-221ENST00000600284 NRIP3Q9NQ35 241 aa13.47□□□□□ -0.25
VRK3-221ENST00000600284 NDUFAF4Q9P032 175 aa13.47□□□□□ -0.25
VRK3-221ENST00000600284 ADAM18Q9Y3Q7 739 aa13.47□□□□□ -0.25
VRK3-221ENST00000600284 PLSCR5A0PG75 271 aa13.46□□□□□ -0.25
VRK3-221ENST00000600284 PRSS37A4D1T9 235 aa13.46□□□□□ -0.25
VRK3-221ENST00000600284 MSMBP08118 114 aa13.46□□□□□ -0.25
VRK3-221ENST00000600284 GAAP10253 952 aa13.46□□□□□ -0.25
VRK3-221ENST00000600284 ZNF26P17031 533 aaPredicted RBP13.46□□□□□ -0.25
VRK3-221ENST00000600284 ITGA2P17301 1181 aa13.46□□□□□ -0.25
VRK3-221ENST00000600284 LIMS1P48059 325 aa13.46□□□□□ -0.25
VRK3-221ENST00000600284 LMO4P61968 165 aa13.46□□□□□ -0.25
VRK3-221ENST00000600284 PPP1CBP62140 327 aa13.46□□□□□ -0.25
VRK3-221ENST00000600284 SCRN3Q0VDG4 424 aa13.46□□□□□ -0.25
VRK3-221ENST00000600284 MESTQ5EB52 335 aa13.46□□□□□ -0.25
VRK3-221ENST00000600284 LIPNQ5VXI9 398 aa13.46□□□□□ -0.25
VRK3-221ENST00000600284 ZNF774Q6NX45 483 aa13.46□□□□□ -0.25
VRK3-221ENST00000600284 ZER1Q7Z7L7 766 aa13.46□□□□□ -0.25
VRK3-221ENST00000600284 RFLNBQ8N5W9 214 aa13.46□□□□□ -0.25
VRK3-221ENST00000600284 TMEM186Q96B77 213 aa13.46□□□□□ -0.25
VRK3-221ENST00000600284 C7orf34Q96L11 122 aa13.46□□□□□ -0.25
VRK3-221ENST00000600284 Q96M85 177 aa13.46□□□□□ -0.25
VRK3-221ENST00000600284 ZNF570Q96NI8 536 aa13.46□□□□□ -0.25
VRK3-221ENST00000600284 DIRC2Q96SL1 478 aa13.46□□□□□ -0.25
VRK3-221ENST00000600284 GPX7Q96SL4 187 aaPredicted RBP13.46□□□□□ -0.25
VRK3-221ENST00000600284 OR2J1Q9GZK6 312 aa13.46□□□□□ -0.25
VRK3-221ENST00000600284 SAP30LQ9HAJ7 183 aa13.46□□□□□ -0.25
VRK3-221ENST00000600284 TBCCD1Q9NVR7 557 aa13.46□□□□□ -0.25
VRK3-221ENST00000600284 EGFL7Q9UHF1 273 aa13.46□□□□□ -0.25
VRK3-221ENST00000600284 KLHL21Q9UJP4 597 aa13.46□□□□□ -0.25
VRK3-221ENST00000600284 ZDHHC8Q9ULC8 765 aa13.46□□□□□ -0.25
VRK3-221ENST00000600284 SIGLEC7Q9Y286 467 aa13.46□□□□□ -0.25
VRK3-221ENST00000600284 TEX13CA0A0J9YWL9 993 aa13.45□□□□□ -0.26
VRK3-221ENST00000600284 FAM157AC9JC47 383 aa13.45□□□□□ -0.26
VRK3-221ENST00000600284 H7C1C5 153 aa13.45□□□□□ -0.26
VRK3-221ENST00000600284 WNT9BO14905 357 aa13.45□□□□□ -0.26
VRK3-221ENST00000600284 TPD52L2O43399 206 aaKnown RBP13.45□□□□□ -0.26
VRK3-221ENST00000600284 SNX3O60493 162 aa13.45□□□□□ -0.26
VRK3-221ENST00000600284 CDC14BO60729 498 aa13.45□□□□□ -0.26
VRK3-221ENST00000600284 SCG5P05408 212 aa13.45□□□□□ -0.26
VRK3-221ENST00000600284 SDHAP31040 664 aa13.45□□□□□ -0.26
VRK3-221ENST00000600284 SRP14P37108 136 aaKnown RBP13.45□□□□□ -0.26
VRK3-221ENST00000600284 MPV17P39210 176 aa13.45□□□□□ -0.26
VRK3-221ENST00000600284 OMPP47874 163 aa13.45□□□□□ -0.26
VRK3-221ENST00000600284 LSM6P62312 80 aaKnown RBP13.45□□□□□ -0.26
VRK3-221ENST00000600284 LCN6P62502 163 aa13.45□□□□□ -0.26
VRK3-221ENST00000600284 KRT72Q14CN4 511 aa13.45□□□□□ -0.26
VRK3-221ENST00000600284 HFEQ30201 348 aa13.45□□□□□ -0.26
VRK3-221ENST00000600284 KRTAP24-1Q3LI83 254 aa13.45□□□□□ -0.26
VRK3-221ENST00000600284 ZMAT1Q5H9K5 638 aa13.45□□□□□ -0.26
VRK3-221ENST00000600284 SPATA46Q5T0L3 261 aa13.45□□□□□ -0.26
VRK3-221ENST00000600284 USP51Q70EK9 711 aa13.45□□□□□ -0.26
VRK3-221ENST00000600284 OR51F2Q8NH61 342 aa13.45□□□□□ -0.26
VRK3-221ENST00000600284 ABHD4Q8TB40 342 aa13.45□□□□□ -0.26
VRK3-221ENST00000600284 IPCEF1Q8WWN9 437 aaPredicted RBP13.45□□□□□ -0.26
VRK3-221ENST00000600284 ELMOD3Q96FG2 381 aa13.45□□□□□ -0.26
VRK3-221ENST00000600284 FAM46AQ96IP4 442 aaKnown RBP13.45□□□□□ -0.26
VRK3-221ENST00000600284 DHRS1Q96LJ7 313 aa13.45□□□□□ -0.26
VRK3-221ENST00000600284 REPIN1Q9BWE0 567 aaKnown RBP13.45□□□□□ -0.26
VRK3-221ENST00000600284 EGLN1Q9GZT9 426 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms