RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 ZNF275Q9NSD4 429 aaPredicted RBP16.04■□□□□ 0.16
PNKP-213ENST00000599543 TAAR3PQ9P1P4 343 aa16.04■□□□□ 0.16
PNKP-213ENST00000599543 TRMUO75648 421 aaKnown RBP16.03■□□□□ 0.16
PNKP-213ENST00000599543 NCR1O76036 304 aa16.03■□□□□ 0.16
PNKP-213ENST00000599543 APLNRP35414 380 aa16.03■□□□□ 0.16
PNKP-213ENST00000599543 DVL1P1P54792 670 aaPredicted RBP16.03■□□□□ 0.16
PNKP-213ENST00000599543 HSF2Q03933 536 aa16.03■□□□□ 0.16
PNKP-213ENST00000599543 FHL1Q13642 323 aa16.03■□□□□ 0.16
PNKP-213ENST00000599543 TMEM154Q6P9G4 183 aa16.03■□□□□ 0.16
PNKP-213ENST00000599543 GLCCI1Q86VQ1 547 aa16.03■□□□□ 0.16
PNKP-213ENST00000599543 CLDND2Q8NHS1 167 aa16.03■□□□□ 0.16
PNKP-213ENST00000599543 ZNF519Q8TB69 540 aa16.03■□□□□ 0.16
PNKP-213ENST00000599543 SYNPRQ8TBG9 265 aa16.03■□□□□ 0.16
PNKP-213ENST00000599543 C11orf40Q8WZ69 217 aa16.03■□□□□ 0.16
PNKP-213ENST00000599543 ZNF416Q9BWM5 594 aa16.03■□□□□ 0.16
PNKP-213ENST00000599543 ANKRD19PQ9H560 264 aa16.03■□□□□ 0.16
PNKP-213ENST00000599543 SLCO1C1Q9NYB5 712 aa16.03■□□□□ 0.16
PNKP-213ENST00000599543 DHRS12A0PJE2 317 aa16.02■□□□□ 0.16
PNKP-213ENST00000599543 PPIHO43447 177 aaKnown RBP16.02■□□□□ 0.16
PNKP-213ENST00000599543 MGRN1O60291 552 aa16.02■□□□□ 0.16
PNKP-213ENST00000599543 SLC2A10O95528 541 aa16.02■□□□□ 0.16
PNKP-213ENST00000599543 CLPTM1O96005 669 aa16.02■□□□□ 0.16
PNKP-213ENST00000599543 NR2C1P13056 603 aa16.02■□□□□ 0.16
PNKP-213ENST00000599543 ZNF250P15622 560 aa16.02■□□□□ 0.16
PNKP-213ENST00000599543 ZNF26P17031 533 aaPredicted RBP16.02■□□□□ 0.16
PNKP-213ENST00000599543 OMPP47874 163 aa16.02■□□□□ 0.16
PNKP-213ENST00000599543 RASSF2P50749 326 aa16.02■□□□□ 0.16
PNKP-213ENST00000599543 TMEM33P57088 247 aa16.02■□□□□ 0.16
PNKP-213ENST00000599543 ERVS71-1P61550 626 aa16.02■□□□□ 0.16
PNKP-213ENST00000599543 CD47Q08722 323 aa16.02■□□□□ 0.16
PNKP-213ENST00000599543 C10orf128Q5T292 105 aa16.02■□□□□ 0.16
PNKP-213ENST00000599543 OAFQ86UD1 273 aa16.02■□□□□ 0.16
PNKP-213ENST00000599543 RNF113BQ8IZP6 322 aaKnown RBP16.02■□□□□ 0.16
PNKP-213ENST00000599543 OR9Q2Q8NGE9 314 aa16.02■□□□□ 0.16
PNKP-213ENST00000599543 LIPHQ8WWY8 451 aa16.02■□□□□ 0.16
PNKP-213ENST00000599543 YIPF5Q969M3 257 aa16.02■□□□□ 0.16
PNKP-213ENST00000599543 MAGIXQ9H6Y5 334 aa16.02■□□□□ 0.16
PNKP-213ENST00000599543 SIAEQ9HAT2 523 aa16.02■□□□□ 0.16
PNKP-213ENST00000599543 SMURF2Q9HAU4 748 aa16.02■□□□□ 0.16
PNKP-213ENST00000599543 CCNB1IP1Q9NPC3 277 aa16.02■□□□□ 0.16
PNKP-213ENST00000599543 HINT3Q9NQE9 182 aaKnown RBP16.02■□□□□ 0.16
PNKP-213ENST00000599543 IL20RAQ9UHF4 553 aa16.02■□□□□ 0.16
PNKP-213ENST00000599543 U3KQV3 271 aa16.02■□□□□ 0.16
PNKP-213ENST00000599543 IGLV3-9A0A075B6K5 115 aa16.01■□□□□ 0.15
PNKP-213ENST00000599543 NPIPB13A6NJU9 1138 aa16.01■□□□□ 0.15
PNKP-213ENST00000599543 AQP12BA6NM10 295 aa16.01■□□□□ 0.15
PNKP-213ENST00000599543 C17orf100A8MU93 164 aa16.01■□□□□ 0.15
PNKP-213ENST00000599543 NPIPB4C9JG80 1138 aa16.01■□□□□ 0.15
PNKP-213ENST00000599543 TNFRSF11BO00300 401 aa16.01■□□□□ 0.15
PNKP-213ENST00000599543 TCF21O43680 179 aa16.01■□□□□ 0.15
PNKP-213ENST00000599543 TFP02787 698 aa16.01■□□□□ 0.15
PNKP-213ENST00000599543 MMP7P09237 267 aaPredicted RBP16.01■□□□□ 0.15
PNKP-213ENST00000599543 CCNOP22674 350 aa16.01■□□□□ 0.15
PNKP-213ENST00000599543 CDAP32320 146 aa16.01■□□□□ 0.15
PNKP-213ENST00000599543 MAGEA2P43356 314 aa16.01■□□□□ 0.15
PNKP-213ENST00000599543 MAGEB1P43366 347 aa16.01■□□□□ 0.15
PNKP-213ENST00000599543 ZNF133P52736 654 aaPredicted RBP16.01■□□□□ 0.15
PNKP-213ENST00000599543 UCP2P55851 309 aa16.01■□□□□ 0.15
PNKP-213ENST00000599543 SMIM11AP58511 58 aa16.01■□□□□ 0.15
PNKP-213ENST00000599543 MRPS34P82930 218 aaKnown RBP16.01■□□□□ 0.15
PNKP-213ENST00000599543 PCGF3Q3KNV8 242 aa16.01■□□□□ 0.15
PNKP-213ENST00000599543 ALG10Q5BKT4 473 aa16.01■□□□□ 0.15
PNKP-213ENST00000599543 PABPC1L2AQ5JQF8 200 aa16.01■□□□□ 0.15
PNKP-213ENST00000599543 ARMC4Q5T2S8 1044 aa16.01■□□□□ 0.15
PNKP-213ENST00000599543 TMPRSS11FQ6ZWK6 438 aa16.01■□□□□ 0.15
PNKP-213ENST00000599543 ZER1Q7Z7L7 766 aa16.01■□□□□ 0.15
PNKP-213ENST00000599543 AQP12AQ8IXF9 295 aa16.01■□□□□ 0.15
PNKP-213ENST00000599543 RFLNBQ8N5W9 214 aa16.01■□□□□ 0.15
PNKP-213ENST00000599543 TSPAN32Q96QS1 320 aa16.01■□□□□ 0.15
PNKP-213ENST00000599543 CHID1Q9BWS9 393 aa16.01■□□□□ 0.15
PNKP-213ENST00000599543 LPAR2Q9HBW0 351 aa16.01■□□□□ 0.15
PNKP-213ENST00000599543 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.01■□□□□ 0.15
PNKP-213ENST00000599543 TMCC3Q9ULS5 477 aa16.01■□□□□ 0.15
PNKP-213ENST00000599543 HIF3AQ9Y2N7 669 aa16.01■□□□□ 0.15
PNKP-213ENST00000599543 LYVE1Q9Y5Y7 322 aa16.01■□□□□ 0.15
PNKP-213ENST00000599543 NBEAL1Q6ZS30 2694 aa16.01■□□□□ 0.15
PNKP-213ENST00000599543 WNK2Q9Y3S1 2297 aa16■□□□□ 0.15
PNKP-213ENST00000599543 EBAG9O00559 213 aa16■□□□□ 0.15
PNKP-213ENST00000599543 OR10H3O60404 316 aa16■□□□□ 0.15
PNKP-213ENST00000599543 RP2O75695 350 aa16■□□□□ 0.15
PNKP-213ENST00000599543 MT-ND5P03915 603 aa16■□□□□ 0.15
PNKP-213ENST00000599543 TSPAN19P0C672 248 aa16■□□□□ 0.15
PNKP-213ENST00000599543 RAP2AP10114 183 aa16■□□□□ 0.15
PNKP-213ENST00000599543 STOMP27105 288 aa16■□□□□ 0.15
PNKP-213ENST00000599543 LIMS1P48059 325 aa16■□□□□ 0.15
PNKP-213ENST00000599543 CTXN1P60606 82 aa16■□□□□ 0.15
PNKP-213ENST00000599543 CCL8P80075 99 aa16■□□□□ 0.15
PNKP-213ENST00000599543 FMODQ06828 376 aa16■□□□□ 0.15
PNKP-213ENST00000599543 LRRC75AQ8NAA5 344 aa16■□□□□ 0.15
PNKP-213ENST00000599543 OR4C15Q8NGM1 316 aa16■□□□□ 0.15
PNKP-213ENST00000599543 NSMAFQ92636 917 aa16■□□□□ 0.15
PNKP-213ENST00000599543 HDAC2Q92769 488 aaKnown RBP16■□□□□ 0.15
PNKP-213ENST00000599543 UTP4Q969X6 686 aaKnown RBP16■□□□□ 0.15
PNKP-213ENST00000599543 TMEM186Q96B77 213 aa16■□□□□ 0.15
PNKP-213ENST00000599543 RSRC1Q96IZ7 334 aaKnown RBP16■□□□□ 0.15
PNKP-213ENST00000599543 RACGAP1Q9H0H5 632 aa16■□□□□ 0.15
PNKP-213ENST00000599543 TXNIPQ9H3M7 391 aa16■□□□□ 0.15
PNKP-213ENST00000599543 TMEM5Q9Y2B1 443 aa16■□□□□ 0.15
PNKP-213ENST00000599543 TCRBV3S1A0A5B6 114 aa15.99■□□□□ 0.15
PNKP-213ENST00000599543 UNC119BA6NIH7 251 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms