RNA–Protein interactions for RNA: ENST00000598256.1

LTBP4-222, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 2

Gene LTBP4, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-222	ENST00000598256	TMCC2	O75069	709 aa		13.94	□□□□□ -0.18
LTBP4-222	ENST00000598256	SCG5	P05408	212 aa		13.94	□□□□□ -0.18
LTBP4-222	ENST00000598256	SBK2	P0C263	348 aa		13.94	□□□□□ -0.18
LTBP4-222	ENST00000598256	CXCR4	P61073	352 aa		13.94	□□□□□ -0.18
LTBP4-222	ENST00000598256	UBE2N	P61088	152 aa	Known RBP	13.94	□□□□□ -0.18
LTBP4-222	ENST00000598256	LSM6	P62312	80 aa	Known RBP	13.94	□□□□□ -0.18
LTBP4-222	ENST00000598256	CSNK2B	P67870	215 aa		13.94	□□□□□ -0.18
LTBP4-222	ENST00000598256	CACNA1D	Q01668	2161 aa		13.94	□□□□□ -0.18
LTBP4-222	ENST00000598256	FAM27E3	Q08E93	113 aa		13.94	□□□□□ -0.18
LTBP4-222	ENST00000598256	KCNMB1	Q16558	191 aa		13.94	□□□□□ -0.18
LTBP4-222	ENST00000598256	FBXL19-AS1	Q494R0	122 aa		13.94	□□□□□ -0.18
LTBP4-222	ENST00000598256	SLC36A2	Q495M3	483 aa		13.94	□□□□□ -0.18
LTBP4-222	ENST00000598256	FAM27B	Q5VT28	67 aa		13.94	□□□□□ -0.18
LTBP4-222	ENST00000598256	LAIR2	Q6ISS4	152 aa		13.94	□□□□□ -0.18
LTBP4-222	ENST00000598256	UGT2A3	Q6UWM9	527 aa		13.94	□□□□□ -0.18
LTBP4-222	ENST00000598256	SHF	Q7M4L6	423 aa		13.94	□□□□□ -0.18
LTBP4-222	ENST00000598256	SLC16A9	Q7RTY1	509 aa		13.94	□□□□□ -0.18
LTBP4-222	ENST00000598256	LINC00346	Q8IVM7	164 aa		13.94	□□□□□ -0.18
LTBP4-222	ENST00000598256	TIGD4	Q8IY51	512 aa		13.94	□□□□□ -0.18
LTBP4-222	ENST00000598256	STEAP2	Q8NFT2	490 aa		13.94	□□□□□ -0.18
LTBP4-222	ENST00000598256	BCL2L2	Q92843	193 aa	Predicted RBP	13.94	□□□□□ -0.18
LTBP4-222	ENST00000598256	RNASE6	Q93091	150 aa	Known RBP	13.94	□□□□□ -0.18
LTBP4-222	ENST00000598256	ZNF416	Q9BWM5	594 aa		13.94	□□□□□ -0.18
LTBP4-222	ENST00000598256	HDHD5	Q9BXW7	423 aa		13.94	□□□□□ -0.18
LTBP4-222	ENST00000598256	ADGRL4	Q9HBW9	690 aa		13.94	□□□□□ -0.18
LTBP4-222	ENST00000598256	CCNB1IP1	Q9NPC3	277 aa		13.94	□□□□□ -0.18
LTBP4-222	ENST00000598256	KCNG2	Q9UJ96	466 aa		13.94	□□□□□ -0.18
LTBP4-222	ENST00000598256	PCDHGB5	Q9Y5G0	923 aa		13.94	□□□□□ -0.18
LTBP4-222	ENST00000598256	IRGM	A1A4Y4	181 aa		13.93	□□□□□ -0.18
LTBP4-222	ENST00000598256	C12orf71	A8MTZ7	269 aa		13.93	□□□□□ -0.18
LTBP4-222	ENST00000598256	C16orf97	H3BN30	126 aa		13.93	□□□□□ -0.18
LTBP4-222	ENST00000598256	ZNF593	O00488	134 aa	Predicted RBP	13.93	□□□□□ -0.18
LTBP4-222	ENST00000598256	CST2	P09228	141 aa		13.93	□□□□□ -0.18
LTBP4-222	ENST00000598256	CCKAR	P32238	428 aa		13.93	□□□□□ -0.18
LTBP4-222	ENST00000598256	UGT2B10	P36537	528 aa		13.93	□□□□□ -0.18
LTBP4-222	ENST00000598256	RPS27	P42677	84 aa	Known RBP	13.93	□□□□□ -0.18
LTBP4-222	ENST00000598256	TUBA1B	P68363	451 aa		13.93	□□□□□ -0.18
LTBP4-222	ENST00000598256	TUBA4A	P68366	448 aa		13.93	□□□□□ -0.18
LTBP4-222	ENST00000598256	AQP6	Q13520	282 aa		13.93	□□□□□ -0.18
LTBP4-222	ENST00000598256	ENDOG	Q14249	297 aa	Known RBP	13.93	□□□□□ -0.18
LTBP4-222	ENST00000598256	KLHL22	Q53GT1	634 aa		13.93	□□□□□ -0.18
LTBP4-222	ENST00000598256	RBM48	Q5RL73	367 aa	Known RBP	13.93	□□□□□ -0.18
LTBP4-222	ENST00000598256	AHSA2	Q719I0	299 aa		13.93	□□□□□ -0.18
LTBP4-222	ENST00000598256	TUBA1A	Q71U36	451 aa		13.93	□□□□□ -0.18
LTBP4-222	ENST00000598256	SKA3	Q8IX90	412 aa		13.93	□□□□□ -0.18
LTBP4-222	ENST00000598256	SLC35F2	Q8IXU6	374 aa		13.93	□□□□□ -0.18
LTBP4-222	ENST00000598256	ZNF540	Q8NDQ6	660 aa		13.93	□□□□□ -0.18
LTBP4-222	ENST00000598256	OR2AJ1	Q8NGZ0	328 aa		13.93	□□□□□ -0.18
LTBP4-222	ENST00000598256	S100PBP	Q96BU1	408 aa		13.93	□□□□□ -0.18
LTBP4-222	ENST00000598256	ACTR6	Q9GZN1	396 aa		13.93	□□□□□ -0.18
LTBP4-222	ENST00000598256	RNF121	Q9H920	327 aa		13.93	□□□□□ -0.18
LTBP4-222	ENST00000598256	SLC17A5	Q9NRA2	495 aa		13.93	□□□□□ -0.18
LTBP4-222	ENST00000598256	PLCXD1	Q9NUJ7	323 aa		13.93	□□□□□ -0.18
LTBP4-222	ENST00000598256	ASH2L	Q9UBL3	628 aa		13.93	□□□□□ -0.18
LTBP4-222	ENST00000598256	BLOC1S6	Q9UL45	172 aa		13.93	□□□□□ -0.18
LTBP4-222	ENST00000598256	AMDHD2	Q9Y303	409 aa		13.93	□□□□□ -0.18
LTBP4-222	ENST00000598256	TPRKB	Q9Y3C4	175 aa		13.93	□□□□□ -0.18
LTBP4-222	ENST00000598256	PRRC2C	Q9Y520	2896 aa	Known RBP	13.92	□□□□□ -0.18
LTBP4-222	ENST00000598256		A0A1W2PR80	420 aa		13.92	□□□□□ -0.18
LTBP4-222	ENST00000598256	EFCAB10	A6NFE3	127 aa		13.92	□□□□□ -0.18
LTBP4-222	ENST00000598256	OR5H1	A6NKK0	313 aa		13.92	□□□□□ -0.18
LTBP4-222	ENST00000598256	UBL3	O95164	117 aa		13.92	□□□□□ -0.18
LTBP4-222	ENST00000598256	CCDC159	P0C7I6	412 aa		13.92	□□□□□ -0.18
LTBP4-222	ENST00000598256	CD79A	P11912	226 aa		13.92	□□□□□ -0.18
LTBP4-222	ENST00000598256	PCBD1	P61457	104 aa		13.92	□□□□□ -0.18
LTBP4-222	ENST00000598256	ACTC1	P68032	377 aa		13.92	□□□□□ -0.18
LTBP4-222	ENST00000598256	ACTA1	P68133	377 aa		13.92	□□□□□ -0.18
LTBP4-222	ENST00000598256	RAB40B	Q12829	278 aa		13.92	□□□□□ -0.18
LTBP4-222	ENST00000598256	DPY19L4	Q7Z388	723 aa		13.92	□□□□□ -0.18
LTBP4-222	ENST00000598256	DPPA2	Q7Z7J5	298 aa		13.92	□□□□□ -0.18
LTBP4-222	ENST00000598256	CCDC36	Q8IYA8	594 aa		13.92	□□□□□ -0.18
LTBP4-222	ENST00000598256	OR10H4	Q8NGA5	316 aa		13.92	□□□□□ -0.18
LTBP4-222	ENST00000598256	OR4F15	Q8NGB8	312 aa		13.92	□□□□□ -0.18
LTBP4-222	ENST00000598256	OR52N5	Q8NH56	324 aa		13.92	□□□□□ -0.18
LTBP4-222	ENST00000598256	LGALS12	Q96DT0	336 aa		13.92	□□□□□ -0.18
LTBP4-222	ENST00000598256	TBX5	Q99593	518 aa		13.92	□□□□□ -0.18
LTBP4-222	ENST00000598256	RHNO1	Q9BSD3	238 aa		13.92	□□□□□ -0.18
LTBP4-222	ENST00000598256	YIPF3	Q9GZM5	350 aa		13.92	□□□□□ -0.18
LTBP4-222	ENST00000598256	PCDHGB1	Q9Y5G3	927 aa		13.92	□□□□□ -0.18
LTBP4-222	ENST00000598256	LHFPL6	Q9Y693	200 aa		13.92	□□□□□ -0.18
LTBP4-222	ENST00000598256	LRBA	P50851	2863 aa		13.92	□□□□□ -0.18
LTBP4-222	ENST00000598256	CELSR2	Q9HCU4	2923 aa		13.91	□□□□□ -0.18
LTBP4-222	ENST00000598256	ARPC4-TTLL3	A0A0A6YYG9	625 aa		13.91	□□□□□ -0.18
LTBP4-222	ENST00000598256	ZNF670-ZNF695	F2Z2N8	137 aa		13.91	□□□□□ -0.18
LTBP4-222	ENST00000598256	FADS2	O95864	444 aa	Known RBP	13.91	□□□□□ -0.18
LTBP4-222	ENST00000598256	WNT11	O96014	354 aa		13.91	□□□□□ -0.18
LTBP4-222	ENST00000598256	HLA-H	P01893	362 aa		13.91	□□□□□ -0.18
LTBP4-222	ENST00000598256	PSKH1	P11801	424 aa		13.91	□□□□□ -0.18
LTBP4-222	ENST00000598256	HOXB1	P14653	301 aa	Predicted RBP	13.91	□□□□□ -0.18
LTBP4-222	ENST00000598256	ZNF32	P17041	273 aa		13.91	□□□□□ -0.18
LTBP4-222	ENST00000598256	PIGF	Q07326	219 aa		13.91	□□□□□ -0.18
LTBP4-222	ENST00000598256	SCRN3	Q0VDG4	424 aa		13.91	□□□□□ -0.18
LTBP4-222	ENST00000598256	EIF2B1	Q14232	305 aa	Known RBP	13.91	□□□□□ -0.18
LTBP4-222	ENST00000598256	GSG1	Q2KHT4	349 aa		13.91	□□□□□ -0.18
LTBP4-222	ENST00000598256	TEX30	Q5JUR7	227 aa		13.91	□□□□□ -0.18
LTBP4-222	ENST00000598256	TIMM23B	Q5SRD1	257 aa		13.91	□□□□□ -0.18
LTBP4-222	ENST00000598256	TMEM53	Q6P2H8	277 aa		13.91	□□□□□ -0.18
LTBP4-222	ENST00000598256	CORO6	Q6QEF8	472 aa		13.91	□□□□□ -0.18
LTBP4-222	ENST00000598256	CDC20B	Q86Y33	519 aa		13.91	□□□□□ -0.18
LTBP4-222	ENST00000598256	OR52I1	Q8NGK6	324 aa		13.91	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms