RNA–Protein interactions for RNA: ENST00000596379.1

LINC02560-201, Transcript of long intergenic non-protein coding RNA 2560, humanhuman

BASIC

Gene LINC02560, Length 459 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02560-201ENST00000596379 CST2P09228 141 aa13.46□□□□□ -0.25
LINC02560-201ENST00000596379 SBK2P0C263 348 aa13.46□□□□□ -0.25
LINC02560-201ENST00000596379 THRBP10828 461 aa13.46□□□□□ -0.25
LINC02560-201ENST00000596379 RBMXP38159 391 aaKnown RBP13.46□□□□□ -0.25
LINC02560-201ENST00000596379 GUCA1AP43080 201 aaPredicted RBP13.46□□□□□ -0.25
LINC02560-201ENST00000596379 CTXN1P60606 82 aa13.46□□□□□ -0.25
LINC02560-201ENST00000596379 RPL27P61353 136 aaKnown RBP13.46□□□□□ -0.25
LINC02560-201ENST00000596379 UBA52P62987 128 aaKnown RBP13.46□□□□□ -0.25
LINC02560-201ENST00000596379 TAF11Q15544 211 aa13.46□□□□□ -0.25
LINC02560-201ENST00000596379 ZNF774Q6NX45 483 aa13.46□□□□□ -0.25
LINC02560-201ENST00000596379 DVL3Q92997 716 aaPredicted RBP13.46□□□□□ -0.25
LINC02560-201ENST00000596379 C4orf45Q96LM5 186 aa13.46□□□□□ -0.25
LINC02560-201ENST00000596379 DIRC2Q96SL1 478 aa13.46□□□□□ -0.25
LINC02560-201ENST00000596379 ELOVL3Q9HB03 270 aa13.46□□□□□ -0.25
LINC02560-201ENST00000596379 NTN4Q9HB63 628 aa13.46□□□□□ -0.25
LINC02560-201ENST00000596379 MMP26Q9NRE1 261 aa13.46□□□□□ -0.25
LINC02560-201ENST00000596379 DDX28Q9NUL7 540 aaKnown RBP13.46□□□□□ -0.25
LINC02560-201ENST00000596379 CGGBP1Q9UFW8 167 aaPredicted RBP13.46□□□□□ -0.25
LINC02560-201ENST00000596379 HIF3AQ9Y2N7 669 aa13.46□□□□□ -0.25
LINC02560-201ENST00000596379 NPTNQ9Y639 398 aa13.46□□□□□ -0.25
LINC02560-201ENST00000596379 MGAM2Q2M2H8 2515 aa13.45□□□□□ -0.26
LINC02560-201ENST00000596379 A0A1W2PPL8 197 aa13.45□□□□□ -0.26
LINC02560-201ENST00000596379 ICMTO60725 284 aa13.45□□□□□ -0.26
LINC02560-201ENST00000596379 IFNA14P01570 189 aa13.45□□□□□ -0.26
LINC02560-201ENST00000596379 IFI30P13284 250 aa13.45□□□□□ -0.26
LINC02560-201ENST00000596379 ARHGDIAP52565 204 aa13.45□□□□□ -0.26
LINC02560-201ENST00000596379 PCBD1P61457 104 aa13.45□□□□□ -0.26
LINC02560-201ENST00000596379 TNFAIP6P98066 277 aaPredicted RBP13.45□□□□□ -0.26
LINC02560-201ENST00000596379 PSG7Q13046 419 aa13.45□□□□□ -0.26
LINC02560-201ENST00000596379 MTX3Q5HYI7 312 aa13.45□□□□□ -0.26
LINC02560-201ENST00000596379 METTL21CQ5VZV1 264 aa13.45□□□□□ -0.26
LINC02560-201ENST00000596379 IGFN1Q86VF2 1251 aa13.45□□□□□ -0.26
LINC02560-201ENST00000596379 SIGLECL1Q8N7X8 197 aa13.45□□□□□ -0.26
LINC02560-201ENST00000596379 OR8J3Q8NGG0 315 aa13.45□□□□□ -0.26
LINC02560-201ENST00000596379 FNDC8Q8TC99 324 aa13.45□□□□□ -0.26
LINC02560-201ENST00000596379 LRRC58Q96CX6 371 aa13.45□□□□□ -0.26
LINC02560-201ENST00000596379 BPIFA2Q96DR5 249 aa13.45□□□□□ -0.26
LINC02560-201ENST00000596379 ZNF583Q96ND8 569 aa13.45□□□□□ -0.26
LINC02560-201ENST00000596379 EGFL7Q9UHF1 273 aa13.45□□□□□ -0.26
LINC02560-201ENST00000596379 PCDHGB1Q9Y5G3 927 aa13.45□□□□□ -0.26
LINC02560-201ENST00000596379 PPIAL4EA0A075B759 164 aa13.44□□□□□ -0.26
LINC02560-201ENST00000596379 PPIAL4CA0A0B4J2A2 164 aa13.44□□□□□ -0.26
LINC02560-201ENST00000596379 PPIAL4DF5H284 164 aa13.44□□□□□ -0.26
LINC02560-201ENST00000596379 H3BSA7 217 aa13.44□□□□□ -0.26
LINC02560-201ENST00000596379 TIMM8AO60220 97 aaPredicted RBP13.44□□□□□ -0.26
LINC02560-201ENST00000596379 EDF1O60869 148 aaKnown RBP13.44□□□□□ -0.26
LINC02560-201ENST00000596379 IGHV2-70P01814 119 aa13.44□□□□□ -0.26
LINC02560-201ENST00000596379 IGHMP01871 453 aa13.44□□□□□ -0.26
LINC02560-201ENST00000596379 SCG5P05408 212 aa13.44□□□□□ -0.26
LINC02560-201ENST00000596379 PPIAL4FP0DN26 164 aa13.44□□□□□ -0.26
LINC02560-201ENST00000596379 FUT4P22083 530 aa13.44□□□□□ -0.26
LINC02560-201ENST00000596379 ST3GAL3Q11203 375 aa13.44□□□□□ -0.26
LINC02560-201ENST00000596379 CDK5R2Q13319 367 aa13.44□□□□□ -0.26
LINC02560-201ENST00000596379 ENDOGQ14249 297 aaKnown RBP13.44□□□□□ -0.26
LINC02560-201ENST00000596379 CYBRD1Q53TN4 286 aa13.44□□□□□ -0.26
LINC02560-201ENST00000596379 ZMAT1Q5H9K5 638 aa13.44□□□□□ -0.26
LINC02560-201ENST00000596379 ERICH5Q6P6B1 374 aa13.44□□□□□ -0.26
LINC02560-201ENST00000596379 RBMS3Q6XE24 437 aaKnown RBP13.44□□□□□ -0.26
LINC02560-201ENST00000596379 FOXL2NBQ6ZUU3 175 aa13.44□□□□□ -0.26
LINC02560-201ENST00000596379 MICU2Q8IYU8 434 aa13.44□□□□□ -0.26
LINC02560-201ENST00000596379 LRRC75AQ8NAA5 344 aa13.44□□□□□ -0.26
LINC02560-201ENST00000596379 DEFB108BQ8NET1 73 aa13.44□□□□□ -0.26
LINC02560-201ENST00000596379 OR51A7Q8NH64 312 aa13.44□□□□□ -0.26
LINC02560-201ENST00000596379 C10orf82Q8WW14 230 aa13.44□□□□□ -0.26
LINC02560-201ENST00000596379 TPD52L3Q96J77 140 aa13.44□□□□□ -0.26
LINC02560-201ENST00000596379 TMEM106BQ9NUM4 274 aa13.44□□□□□ -0.26
LINC02560-201ENST00000596379 A4GNTQ9UNA3 340 aa13.44□□□□□ -0.26
LINC02560-201ENST00000596379 HTR3EA5X5Y0 456 aa13.43□□□□□ -0.26
LINC02560-201ENST00000596379 TRAPPC2LH3BP13 241 aa13.43□□□□□ -0.26
LINC02560-201ENST00000596379 FXYD1O00168 92 aa13.43□□□□□ -0.26
LINC02560-201ENST00000596379 HKR1P10072 659 aa13.43□□□□□ -0.26
LINC02560-201ENST00000596379 MSR1P21757 451 aa13.43□□□□□ -0.26
LINC02560-201ENST00000596379 KDELR2P33947 212 aa13.43□□□□□ -0.26
LINC02560-201ENST00000596379 LRRC23Q53EV4 343 aaPredicted RBP13.43□□□□□ -0.26
LINC02560-201ENST00000596379 FAM205BPQ63HN1 556 aa13.43□□□□□ -0.26
LINC02560-201ENST00000596379 ARL9Q6T311 187 aa13.43□□□□□ -0.26
LINC02560-201ENST00000596379 ZER1Q7Z7L7 766 aa13.43□□□□□ -0.26
LINC02560-201ENST00000596379 SYT9Q86SS6 491 aa13.43□□□□□ -0.26
LINC02560-201ENST00000596379 POP5Q969H6 163 aaKnown RBP13.43□□□□□ -0.26
LINC02560-201ENST00000596379 DUX5Q96PT3 197 aa13.43□□□□□ -0.26
LINC02560-201ENST00000596379 SIKE1Q9BRV8 207 aa13.43□□□□□ -0.26
LINC02560-201ENST00000596379 ZNF747Q9BV97 191 aa13.43□□□□□ -0.26
LINC02560-201ENST00000596379 C1QTNF5Q9BXJ0 243 aa13.43□□□□□ -0.26
LINC02560-201ENST00000596379 POFUT1Q9H488 388 aa13.43□□□□□ -0.26
LINC02560-201ENST00000596379 PATZ1Q9HBE1 687 aaKnown RBP13.43□□□□□ -0.26
LINC02560-201ENST00000596379 EMC7Q9NPA0 242 aa13.43□□□□□ -0.26
LINC02560-201ENST00000596379 PURGQ9UJV8 347 aaKnown RBP13.43□□□□□ -0.26
LINC02560-201ENST00000596379 NDRG4Q9ULP0 352 aaKnown RBP13.43□□□□□ -0.26
LINC02560-201ENST00000596379 TRAV27A0A087WT01 109 aa13.42□□□□□ -0.26
LINC02560-201ENST00000596379 A6NIZ1 184 aa13.42□□□□□ -0.26
LINC02560-201ENST00000596379 C12orf71A8MTZ7 269 aa13.42□□□□□ -0.26
LINC02560-201ENST00000596379 H7C1C5 153 aa13.42□□□□□ -0.26
LINC02560-201ENST00000596379 ABHD16AO95870 558 aa13.42□□□□□ -0.26
LINC02560-201ENST00000596379 YAP1P46937 504 aaKnown RBP13.42□□□□□ -0.26
LINC02560-201ENST00000596379 SLC6A9P48067 706 aa13.42□□□□□ -0.26
LINC02560-201ENST00000596379 RAP1BP61224 184 aa13.42□□□□□ -0.26
LINC02560-201ENST00000596379 SEC61A1P61619 476 aaKnown RBP13.42□□□□□ -0.26
LINC02560-201ENST00000596379 LCN6P62502 163 aa13.42□□□□□ -0.26
LINC02560-201ENST00000596379 RAP1AP62834 184 aa13.42□□□□□ -0.26
LINC02560-201ENST00000596379 SELENOWP63302 87 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms