RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 GLCEO94923 617 aa9.17□□□□□ -0.94
LIG1-210ENST00000596332 WNT11O96014 354 aa9.17□□□□□ -0.94
LIG1-210ENST00000596332 CECR9P0C854 216 aa9.17□□□□□ -0.94
LIG1-210ENST00000596332 ANOS1P23352 680 aa9.17□□□□□ -0.94
LIG1-210ENST00000596332 CD40P25942 277 aa9.17□□□□□ -0.94
LIG1-210ENST00000596332 RPS27P42677 84 aaKnown RBP9.17□□□□□ -0.94
LIG1-210ENST00000596332 TEKQ02763 1124 aa9.17□□□□□ -0.94
LIG1-210ENST00000596332 HGFACQ04756 655 aa9.17□□□□□ -0.94
LIG1-210ENST00000596332 BSPH1Q075Z2 132 aa9.17□□□□□ -0.94
LIG1-210ENST00000596332 RAB39AQ14964 217 aa9.17□□□□□ -0.94
LIG1-210ENST00000596332 MSMPQ1L6U9 139 aa9.17□□□□□ -0.94
LIG1-210ENST00000596332 KRTAP27-1Q3LI81 207 aa9.17□□□□□ -0.94
LIG1-210ENST00000596332 TEX30Q5JUR7 227 aa9.17□□□□□ -0.94
LIG1-210ENST00000596332 SLC25A30Q5SVS4 291 aa9.17□□□□□ -0.94
LIG1-210ENST00000596332 USP51Q70EK9 711 aa9.17□□□□□ -0.94
LIG1-210ENST00000596332 CXXC5Q7LFL8 322 aaKnown RBP9.17□□□□□ -0.94
LIG1-210ENST00000596332 OR2T4Q8NH00 348 aa9.17□□□□□ -0.94
LIG1-210ENST00000596332 RHOXF1Q8NHV9 184 aa9.17□□□□□ -0.94
LIG1-210ENST00000596332 TMEM163Q8TC26 289 aa9.17□□□□□ -0.94
LIG1-210ENST00000596332 APH1BQ8WW43 257 aa9.17□□□□□ -0.94
LIG1-210ENST00000596332 IGFBPL1Q8WX77 278 aa9.17□□□□□ -0.94
LIG1-210ENST00000596332 MAP6Q96JE9 813 aa9.17□□□□□ -0.94
LIG1-210ENST00000596332 SLC38A2Q96QD8 506 aa9.17□□□□□ -0.94
LIG1-210ENST00000596332 IL4I1Q96RQ9 567 aa9.17□□□□□ -0.94
LIG1-210ENST00000596332 OR2H1Q9GZK4 316 aa9.17□□□□□ -0.94
LIG1-210ENST00000596332 RERGLQ9H628 205 aa9.17□□□□□ -0.94
LIG1-210ENST00000596332 CADP27708 2225 aa9.17□□□□□ -0.94
LIG1-210ENST00000596332 CSMD2Q7Z408 3487 aa9.16□□□□□ -0.94
LIG1-210ENST00000596332 ABCA12Q86UK0 2595 aa9.16□□□□□ -0.94
LIG1-210ENST00000596332 LOC100130705A0A1B0GUX0 176 aa9.16□□□□□ -0.94
LIG1-210ENST00000596332 PRR32B1ATL7 298 aa9.16□□□□□ -0.94
LIG1-210ENST00000596332 PRR23D1E9PI22 279 aaPredicted RBP9.16□□□□□ -0.94
LIG1-210ENST00000596332 RER1O15258 196 aa9.16□□□□□ -0.94
LIG1-210ENST00000596332 WBP4O75554 376 aaKnown RBP9.16□□□□□ -0.94
LIG1-210ENST00000596332 CLIC3O95833 236 aa9.16□□□□□ -0.94
LIG1-210ENST00000596332 IFNGP01579 166 aa9.16□□□□□ -0.94
LIG1-210ENST00000596332 SERPINA5P05154 406 aa9.16□□□□□ -0.94
LIG1-210ENST00000596332 PRR23D2P0DMB1 279 aaPredicted RBP9.16□□□□□ -0.94
LIG1-210ENST00000596332 CD79AP11912 226 aa9.16□□□□□ -0.94
LIG1-210ENST00000596332 NR2C1P13056 603 aa9.16□□□□□ -0.94
LIG1-210ENST00000596332 ZNF3P17036 446 aa9.16□□□□□ -0.94
LIG1-210ENST00000596332 ARR3P36575 388 aa9.16□□□□□ -0.94
LIG1-210ENST00000596332 PTDSS1P48651 473 aaKnown RBP9.16□□□□□ -0.94
LIG1-210ENST00000596332 RAD23AP54725 363 aa9.16□□□□□ -0.94
LIG1-210ENST00000596332 ISL1P61371 349 aa9.16□□□□□ -0.94
LIG1-210ENST00000596332 SNRPGP62308 76 aaKnown RBP9.16□□□□□ -0.94
LIG1-210ENST00000596332 NAAAQ02083 359 aa9.16□□□□□ -0.94
LIG1-210ENST00000596332 GSG1Q2KHT4 349 aa9.16□□□□□ -0.94
LIG1-210ENST00000596332 BEX5Q5H9J7 111 aa9.16□□□□□ -0.94
LIG1-210ENST00000596332 PABPC1L2AQ5JQF8 200 aa9.16□□□□□ -0.94
LIG1-210ENST00000596332 ALKBH2Q6NS38 261 aa9.16□□□□□ -0.94
LIG1-210ENST00000596332 SLC18B1Q6NT16 456 aa9.16□□□□□ -0.94
LIG1-210ENST00000596332 CORO6Q6QEF8 472 aa9.16□□□□□ -0.94
LIG1-210ENST00000596332 CFAP77Q6ZQR2 320 aa9.16□□□□□ -0.94
LIG1-210ENST00000596332 SLC16A14Q7RTX9 510 aa9.16□□□□□ -0.94
LIG1-210ENST00000596332 SYT9Q86SS6 491 aa9.16□□□□□ -0.94
LIG1-210ENST00000596332 ENTHD1Q8IYW4 607 aa9.16□□□□□ -0.94
LIG1-210ENST00000596332 AKR7LQ8NHP1 331 aa9.16□□□□□ -0.94
LIG1-210ENST00000596332 ST7LQ8TDW4 575 aa9.16□□□□□ -0.94
LIG1-210ENST00000596332 SMAP2Q8WU79 429 aaPredicted RBP9.16□□□□□ -0.94
LIG1-210ENST00000596332 MUCL1Q96DR8 90 aa9.16□□□□□ -0.94
LIG1-210ENST00000596332 POM121L2Q96KW2 1035 aa9.16□□□□□ -0.94
LIG1-210ENST00000596332 RDH12Q96NR8 316 aa9.16□□□□□ -0.94
LIG1-210ENST00000596332 AMELYQ99218 206 aa9.16□□□□□ -0.94
LIG1-210ENST00000596332 LIME1Q9H400 295 aa9.16□□□□□ -0.94
LIG1-210ENST00000596332 SMPD3Q9NY59 655 aaPredicted RBP9.16□□□□□ -0.94
LIG1-210ENST00000596332 COMMD3-BMI1R4GMX3 469 aa9.16□□□□□ -0.94
LIG1-210ENST00000596332 ABCA4P78363 2273 aa9.16□□□□□ -0.94
LIG1-210ENST00000596332 RTTNQ86VV8 2226 aa9.16□□□□□ -0.94
LIG1-210ENST00000596332 IGHV2OR16-5A0A0B4J2B6 119 aa9.15□□□□□ -0.94
LIG1-210ENST00000596332 OR6C6A6NF89 314 aa9.15□□□□□ -0.94
LIG1-210ENST00000596332 J3QRE1 110 aa9.15□□□□□ -0.94
LIG1-210ENST00000596332 M0R1B8 84 aa9.15□□□□□ -0.94
LIG1-210ENST00000596332 PRODHO43272 600 aa9.15□□□□□ -0.94
LIG1-210ENST00000596332 SYNGR3O43761 229 aa9.15□□□□□ -0.94
LIG1-210ENST00000596332 SELENOFO60613 162 aa9.15□□□□□ -0.94
LIG1-210ENST00000596332 UBL3O95164 117 aa9.15□□□□□ -0.94
LIG1-210ENST00000596332 ADRA2AP08913 450 aa9.15□□□□□ -0.94
LIG1-210ENST00000596332 GNAO1P09471 354 aa9.15□□□□□ -0.94
LIG1-210ENST00000596332 CCL2P13500 99 aa9.15□□□□□ -0.94
LIG1-210ENST00000596332 APEX1P27695 318 aaKnown RBP9.15□□□□□ -0.94
LIG1-210ENST00000596332 GSTT1P30711 240 aa9.15□□□□□ -0.94
LIG1-210ENST00000596332 IDH3GP51553 393 aaPredicted RBP9.15□□□□□ -0.94
LIG1-210ENST00000596332 HCCSP53701 268 aa9.15□□□□□ -0.94
LIG1-210ENST00000596332 UBE2NP61088 152 aaKnown RBP9.15□□□□□ -0.94
LIG1-210ENST00000596332 NKX6-1P78426 367 aaPredicted RBP9.15□□□□□ -0.94
LIG1-210ENST00000596332 TLE4Q04727 773 aa9.15□□□□□ -0.94
LIG1-210ENST00000596332 GLO1Q04760 184 aa9.15□□□□□ -0.94
LIG1-210ENST00000596332 APOFQ13790 326 aa9.15□□□□□ -0.94
LIG1-210ENST00000596332 KEAP1Q14145 624 aa9.15□□□□□ -0.94
LIG1-210ENST00000596332 OCLNQ16625 522 aa9.15□□□□□ -0.94
LIG1-210ENST00000596332 TMEM255AQ5JRV8 349 aa9.15□□□□□ -0.94
LIG1-210ENST00000596332 NXNL2Q5VZ03 156 aa9.15□□□□□ -0.94
LIG1-210ENST00000596332 ADAM5Q6NVV9 412 aa9.15□□□□□ -0.94
LIG1-210ENST00000596332 ZNF774Q6NX45 483 aa9.15□□□□□ -0.94
LIG1-210ENST00000596332 MEPCEQ7L2J0 689 aaKnown RBP9.15□□□□□ -0.94
LIG1-210ENST00000596332 VASH1Q7L8A9 365 aaPredicted RBP9.15□□□□□ -0.94
LIG1-210ENST00000596332 SSX8Q7RTT4 187 aa9.15□□□□□ -0.94
LIG1-210ENST00000596332 CDC20BQ86Y33 519 aa9.15□□□□□ -0.94
LIG1-210ENST00000596332 LINC00346Q8IVM7 164 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms