RNA–Protein interactions for RNA: ENST00000596014.5

PNKP-207, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-207ENST00000596014 PLCE1Q9P212 2302 aa16.82■□□□□ 0.28
PNKP-207ENST00000596014 POLQO75417 2590 aa16.82■□□□□ 0.28
PNKP-207ENST00000596014 A0A1W2PPR1 153 aa16.81■□□□□ 0.28
PNKP-207ENST00000596014 SURF4O15260 269 aa16.81■□□□□ 0.28
PNKP-207ENST00000596014 IGLV1-44P01699 117 aa16.81■□□□□ 0.28
PNKP-207ENST00000596014 ZNF3P17036 446 aa16.81■□□□□ 0.28
PNKP-207ENST00000596014 MSR1P21757 451 aa16.81■□□□□ 0.28
PNKP-207ENST00000596014 CD40P25942 277 aa16.81■□□□□ 0.28
PNKP-207ENST00000596014 SLC36A2Q495M3 483 aa16.81■□□□□ 0.28
PNKP-207ENST00000596014 DPPA2Q7Z7J5 298 aa16.81■□□□□ 0.28
PNKP-207ENST00000596014 C8orf59Q8N0T1 100 aaPredicted RBP16.81■□□□□ 0.28
PNKP-207ENST00000596014 TMEM204Q9BSN7 226 aa16.81■□□□□ 0.28
PNKP-207ENST00000596014 TEX12Q9BXU0 123 aa16.81■□□□□ 0.28
PNKP-207ENST00000596014 YIPF3Q9GZM5 350 aa16.81■□□□□ 0.28
PNKP-207ENST00000596014 RACGAP1Q9H0H5 632 aa16.81■□□□□ 0.28
PNKP-207ENST00000596014 KCNN2Q9H2S1 579 aa16.81■□□□□ 0.28
PNKP-207ENST00000596014 NDUFA13Q9P0J0 144 aa16.81■□□□□ 0.28
PNKP-207ENST00000596014 NOTCH2Q04721 2471 aa16.81■□□□□ 0.28
PNKP-207ENST00000596014 IGHV1-18A0A0C4DH31 117 aa16.81■□□□□ 0.28
PNKP-207ENST00000596014 TRIM64CA6NLI5 447 aa16.81■□□□□ 0.28
PNKP-207ENST00000596014 MPZL1O95297 269 aa16.81■□□□□ 0.28
PNKP-207ENST00000596014 CD3EP07766 207 aa16.81■□□□□ 0.28
PNKP-207ENST00000596014 POLR2IP36954 125 aaKnown RBP16.81■□□□□ 0.28
PNKP-207ENST00000596014 CENPAP49450 140 aa16.81■□□□□ 0.28
PNKP-207ENST00000596014 KRTAP10-9P60411 292 aa16.81■□□□□ 0.28
PNKP-207ENST00000596014 NPRL3Q12980 569 aa16.81■□□□□ 0.28
PNKP-207ENST00000596014 C3orf36Q3SXR2 165 aa16.81■□□□□ 0.28
PNKP-207ENST00000596014 CDC20BQ86Y33 519 aa16.81■□□□□ 0.28
PNKP-207ENST00000596014 OR2T4Q8NH00 348 aa16.81■□□□□ 0.28
PNKP-207ENST00000596014 FBXO17Q96EF6 278 aa16.81■□□□□ 0.28
PNKP-207ENST00000596014 ZNF75AQ96N20 296 aa16.81■□□□□ 0.28
PNKP-207ENST00000596014 SLC38A2Q96QD8 506 aa16.81■□□□□ 0.28
PNKP-207ENST00000596014 GABARAPL3Q9BY60 117 aa16.81■□□□□ 0.28
PNKP-207ENST00000596014 NMNAT2Q9BZQ4 307 aa16.81■□□□□ 0.28
PNKP-207ENST00000596014 EMC7Q9NPA0 242 aa16.81■□□□□ 0.28
PNKP-207ENST00000596014 A0A087WXM4 84 aa16.8■□□□□ 0.28
PNKP-207ENST00000596014 ZAR1LA6NP61 321 aa16.8■□□□□ 0.28
PNKP-207ENST00000596014 FAM171A2A8MVW0 826 aa16.8■□□□□ 0.28
PNKP-207ENST00000596014 ABCD4O14678 606 aa16.8■□□□□ 0.28
PNKP-207ENST00000596014 GPANK1O95872 356 aa16.8■□□□□ 0.28
PNKP-207ENST00000596014 PLAUP00749 431 aa16.8■□□□□ 0.28
PNKP-207ENST00000596014 CELA3BP08861 270 aa16.8■□□□□ 0.28
PNKP-207ENST00000596014 CST2P09228 141 aa16.8■□□□□ 0.28
PNKP-207ENST00000596014 MMP7P09237 267 aaPredicted RBP16.8■□□□□ 0.28
PNKP-207ENST00000596014 IDH3GP51553 393 aaPredicted RBP16.8■□□□□ 0.28
PNKP-207ENST00000596014 SLC25A1P53007 311 aa16.8■□□□□ 0.28
PNKP-207ENST00000596014 CDH15P55291 814 aa16.8■□□□□ 0.28
PNKP-207ENST00000596014 GLO1Q04760 184 aa16.8■□□□□ 0.28
PNKP-207ENST00000596014 IL18R1Q13478 541 aa16.8■□□□□ 0.28
PNKP-207ENST00000596014 OR9Q1Q8NGQ5 310 aa16.8■□□□□ 0.28
PNKP-207ENST00000596014 ZNRF4Q8WWF5 429 aa16.8■□□□□ 0.28
PNKP-207ENST00000596014 ZNF416Q9BWM5 594 aa16.8■□□□□ 0.28
PNKP-207ENST00000596014 YTHDF1Q9BYJ9 559 aaKnown RBP16.8■□□□□ 0.28
PNKP-207ENST00000596014 RIBC2Q9H4K1 309 aa16.8■□□□□ 0.28
PNKP-207ENST00000596014 RNF121Q9H920 327 aa16.8■□□□□ 0.28
PNKP-207ENST00000596014 TVP23BQ9NYZ1 205 aa16.8■□□□□ 0.28
PNKP-207ENST00000596014 RNF115Q9Y4L5 304 aa16.8■□□□□ 0.28
PNKP-207ENST00000596014 FAM183AA6NL82 134 aa16.79■□□□□ 0.28
PNKP-207ENST00000596014 RAB36O95755 333 aa16.79■□□□□ 0.28
PNKP-207ENST00000596014 CECR9P0C854 216 aa16.79■□□□□ 0.28
PNKP-207ENST00000596014 GAAP10253 952 aa16.79■□□□□ 0.28
PNKP-207ENST00000596014 PYCR1P32322 319 aa16.79■□□□□ 0.28
PNKP-207ENST00000596014 ENDOGQ14249 297 aaKnown RBP16.79■□□□□ 0.28
PNKP-207ENST00000596014 SNAPC1Q16533 368 aa16.79■□□□□ 0.28
PNKP-207ENST00000596014 KCNMB1Q16558 191 aa16.79■□□□□ 0.28
PNKP-207ENST00000596014 SLX4IPQ5VYV7 408 aa16.79■□□□□ 0.28
PNKP-207ENST00000596014 OTPQ5XKR4 325 aa16.79■□□□□ 0.28
PNKP-207ENST00000596014 TMEM53Q6P2H8 277 aa16.79■□□□□ 0.28
PNKP-207ENST00000596014 THAP5Q7Z6K1 395 aa16.79■□□□□ 0.28
PNKP-207ENST00000596014 MYPOPQ86VE0 399 aaPredicted RBP16.79■□□□□ 0.28
PNKP-207ENST00000596014 C11orf40Q8WZ69 217 aa16.79■□□□□ 0.28
PNKP-207ENST00000596014 PTP4A1Q93096 173 aa16.79■□□□□ 0.28
PNKP-207ENST00000596014 HCAR1Q9BXC0 346 aa16.79■□□□□ 0.28
PNKP-207ENST00000596014 C12orf71A8MTZ7 269 aa16.78■□□□□ 0.28
PNKP-207ENST00000596014 CLUP10909 449 aa16.78■□□□□ 0.28
PNKP-207ENST00000596014 ZNF14P17017 642 aaPredicted RBP16.78■□□□□ 0.28
PNKP-207ENST00000596014 ZNF32P17041 273 aa16.78■□□□□ 0.28
PNKP-207ENST00000596014 SPI1P17947 270 aa16.78■□□□□ 0.28
PNKP-207ENST00000596014 ALDH3B2P48448 385 aa16.78■□□□□ 0.28
PNKP-207ENST00000596014 LSM6P62312 80 aaKnown RBP16.78■□□□□ 0.28
PNKP-207ENST00000596014 HSF2Q03933 536 aa16.78■□□□□ 0.28
PNKP-207ENST00000596014 CNPY1Q3B7I2 92 aa16.78■□□□□ 0.28
PNKP-207ENST00000596014 ZNF691Q5VV52 312 aa16.78■□□□□ 0.28
PNKP-207ENST00000596014 ZNF704Q6ZNC4 412 aaPredicted RBP16.78■□□□□ 0.28
PNKP-207ENST00000596014 PROKR2Q8NFJ6 384 aa16.78■□□□□ 0.28
PNKP-207ENST00000596014 SLC26A10Q8NG04 563 aa16.78■□□□□ 0.28
PNKP-207ENST00000596014 OR51L1Q8NGJ5 315 aa16.78■□□□□ 0.28
PNKP-207ENST00000596014 OTULINQ96BN8 352 aa16.78■□□□□ 0.28
PNKP-207ENST00000596014 MS4A3Q96HJ5 214 aa16.78■□□□□ 0.28
PNKP-207ENST00000596014 PLEKHA8Q96JA3 519 aa16.78■□□□□ 0.28
PNKP-207ENST00000596014 RADILQ96JH8 1075 aa16.78■□□□□ 0.28
PNKP-207ENST00000596014 RBM38Q9H0Z9 239 aaKnown RBP16.78■□□□□ 0.28
PNKP-207ENST00000596014 MED20Q9H944 212 aa16.78■□□□□ 0.28
PNKP-207ENST00000596014 CCNB1IP1Q9NPC3 277 aa16.78■□□□□ 0.28
PNKP-207ENST00000596014 CSMD2Q7Z408 3487 aa16.78■□□□□ 0.28
PNKP-207ENST00000596014 SLC16A6O15403 523 aa16.78■□□□□ 0.28
PNKP-207ENST00000596014 TFP02787 698 aa16.78■□□□□ 0.28
PNKP-207ENST00000596014 SERPINA5P05154 406 aa16.78■□□□□ 0.28
PNKP-207ENST00000596014 GYPBP06028 91 aa16.78■□□□□ 0.28
PNKP-207ENST00000596014 PAICSP22234 425 aaKnown RBP16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms