RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 PLCZ1Q86YW0 608 aa11.27□□□□□ -0.61
SCAF1-202ENST00000595242 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.27□□□□□ -0.61
SCAF1-202ENST00000595242 LRRC75AQ8NAA5 344 aa11.27□□□□□ -0.61
SCAF1-202ENST00000595242 SLC37A3Q8NCC5 494 aa11.27□□□□□ -0.61
SCAF1-202ENST00000595242 OR6Q1Q8NGQ2 317 aa11.27□□□□□ -0.61
SCAF1-202ENST00000595242 OR9Q1Q8NGQ5 310 aa11.27□□□□□ -0.61
SCAF1-202ENST00000595242 FNDC9Q8TBE3 224 aa11.27□□□□□ -0.61
SCAF1-202ENST00000595242 S100ZQ8WXG8 99 aa11.27□□□□□ -0.61
SCAF1-202ENST00000595242 PTP4A1Q93096 173 aa11.27□□□□□ -0.61
SCAF1-202ENST00000595242 DDOQ99489 341 aa11.27□□□□□ -0.61
SCAF1-202ENST00000595242 TRAF4Q9BUZ4 470 aaPredicted RBP11.27□□□□□ -0.61
SCAF1-202ENST00000595242 HCAR1Q9BXC0 346 aa11.27□□□□□ -0.61
SCAF1-202ENST00000595242 TBL1XR1Q9BZK7 514 aa11.27□□□□□ -0.61
SCAF1-202ENST00000595242 AKIP1Q9NQ31 210 aa11.27□□□□□ -0.61
SCAF1-202ENST00000595242 ERVK13-1Q9NX77 482 aa11.27□□□□□ -0.61
SCAF1-202ENST00000595242 FBXL2Q9UKC9 423 aa11.27□□□□□ -0.61
SCAF1-202ENST00000595242 KCNS2Q9ULS6 477 aa11.27□□□□□ -0.61
SCAF1-202ENST00000595242 B3GALT5Q9Y2C3 310 aa11.27□□□□□ -0.61
SCAF1-202ENST00000595242 MRPS18CQ9Y3D5 142 aaKnown RBP11.27□□□□□ -0.61
SCAF1-202ENST00000595242 SLC35F4A4IF30 521 aa11.26□□□□□ -0.61
SCAF1-202ENST00000595242 FAM183AA6NL82 134 aa11.26□□□□□ -0.61
SCAF1-202ENST00000595242 MCIDASD6RGH6 385 aa11.26□□□□□ -0.61
SCAF1-202ENST00000595242 H0YC42 278 aa11.26□□□□□ -0.61
SCAF1-202ENST00000595242 ETV2O00321 342 aaPredicted RBP11.26□□□□□ -0.61
SCAF1-202ENST00000595242 ZIC3O60481 467 aa11.26□□□□□ -0.61
SCAF1-202ENST00000595242 GPX5O75715 221 aa11.26□□□□□ -0.61
SCAF1-202ENST00000595242 TXNDC12O95881 172 aa11.26□□□□□ -0.61
SCAF1-202ENST00000595242 SLC25A16P16260 332 aa11.26□□□□□ -0.61
SCAF1-202ENST00000595242 HNF1AP20823 631 aa11.26□□□□□ -0.61
SCAF1-202ENST00000595242 PAICSP22234 425 aaKnown RBP11.26□□□□□ -0.61
SCAF1-202ENST00000595242 TACR3P29371 465 aa11.26□□□□□ -0.61
SCAF1-202ENST00000595242 CRYBB2P43320 205 aa11.26□□□□□ -0.61
SCAF1-202ENST00000595242 CAPZA2P47755 286 aa11.26□□□□□ -0.61
SCAF1-202ENST00000595242 CCR4P51679 360 aa11.26□□□□□ -0.61
SCAF1-202ENST00000595242 BMXP51813 675 aa11.26□□□□□ -0.61
SCAF1-202ENST00000595242 SUCLG1P53597 346 aaKnown RBP11.26□□□□□ -0.61
SCAF1-202ENST00000595242 CBFBQ13951 182 aa11.26□□□□□ -0.61
SCAF1-202ENST00000595242 CRMP1Q14194 572 aa11.26□□□□□ -0.61
SCAF1-202ENST00000595242 PON3Q15166 354 aa11.26□□□□□ -0.61
SCAF1-202ENST00000595242 NCMAPQ5T1S8 102 aa11.26□□□□□ -0.61
SCAF1-202ENST00000595242 FAM166AQ6J272 317 aa11.26□□□□□ -0.61
SCAF1-202ENST00000595242 CD200R1LQ6Q8B3 271 aa11.26□□□□□ -0.61
SCAF1-202ENST00000595242 C5orf46Q6UWT4 87 aa11.26□□□□□ -0.61
SCAF1-202ENST00000595242 ADCK1Q86TW2 530 aa11.26□□□□□ -0.61
SCAF1-202ENST00000595242 KLHL36Q8N4N3 616 aa11.26□□□□□ -0.61
SCAF1-202ENST00000595242 RFLNBQ8N5W9 214 aa11.26□□□□□ -0.61
SCAF1-202ENST00000595242 OR4F15Q8NGB8 312 aa11.26□□□□□ -0.61
SCAF1-202ENST00000595242 OR6S1Q8NH40 331 aa11.26□□□□□ -0.61
SCAF1-202ENST00000595242 ZNF563Q8TA94 476 aa11.26□□□□□ -0.61
SCAF1-202ENST00000595242 ZNF524Q96C55 264 aa11.26□□□□□ -0.61
SCAF1-202ENST00000595242 ZMYND19Q96E35 227 aaPredicted RBP11.26□□□□□ -0.61
SCAF1-202ENST00000595242 SH3YL1Q96HL8 342 aaPredicted RBP11.26□□□□□ -0.61
SCAF1-202ENST00000595242 CHCHD6Q9BRQ6 235 aa11.26□□□□□ -0.61
SCAF1-202ENST00000595242 CENPOQ9BU64 300 aa11.26□□□□□ -0.61
SCAF1-202ENST00000595242 NMNAT2Q9BZQ4 307 aa11.26□□□□□ -0.61
SCAF1-202ENST00000595242 MMP27Q9H306 513 aa11.26□□□□□ -0.61
SCAF1-202ENST00000595242 FKRPQ9H9S5 495 aa11.26□□□□□ -0.61
SCAF1-202ENST00000595242 FANCFQ9NPI8 374 aa11.26□□□□□ -0.61
SCAF1-202ENST00000595242 ZNF229Q9UJW7 825 aa11.26□□□□□ -0.61
SCAF1-202ENST00000595242 DKKL1Q9UK85 242 aa11.26□□□□□ -0.61
SCAF1-202ENST00000595242 CAB39Q9Y376 341 aaPredicted RBP11.26□□□□□ -0.61
SCAF1-202ENST00000595242 SF3B6Q9Y3B4 125 aaKnown RBP11.26□□□□□ -0.61
SCAF1-202ENST00000595242 TRRAPQ9Y4A5 3859 aa11.25□□□□□ -0.61
SCAF1-202ENST00000595242 ZNF670-ZNF695F2Z2N8 137 aa11.25□□□□□ -0.61
SCAF1-202ENST00000595242 NPIPB7O75200 414 aa11.25□□□□□ -0.61
SCAF1-202ENST00000595242 BGLAPP02818 100 aa11.25□□□□□ -0.61
SCAF1-202ENST00000595242 PSMA1P25786 263 aaKnown RBP11.25□□□□□ -0.61
SCAF1-202ENST00000595242 NOS3P29474 1203 aa11.25□□□□□ -0.61
SCAF1-202ENST00000595242 TGFBR1P36897 503 aa11.25□□□□□ -0.61
SCAF1-202ENST00000595242 OPRL1P41146 370 aa11.25□□□□□ -0.61
SCAF1-202ENST00000595242 B3GALT5-AS1P59052 145 aa11.25□□□□□ -0.61
SCAF1-202ENST00000595242 ZNF846Q147U1 533 aa11.25□□□□□ -0.61
SCAF1-202ENST00000595242 SLC35D3Q5M8T2 416 aa11.25□□□□□ -0.61
SCAF1-202ENST00000595242 SLC35F1Q5T1Q4 408 aa11.25□□□□□ -0.61
SCAF1-202ENST00000595242 OR2G6Q5TZ20 316 aa11.25□□□□□ -0.61
SCAF1-202ENST00000595242 OR5M10Q6IEU7 315 aa11.25□□□□□ -0.61
SCAF1-202ENST00000595242 FAM122BQ7Z309 247 aa11.25□□□□□ -0.61
SCAF1-202ENST00000595242 ACBD7Q8N6N7 88 aa11.25□□□□□ -0.61
SCAF1-202ENST00000595242 LRRC17Q8N6Y2 441 aa11.25□□□□□ -0.61
SCAF1-202ENST00000595242 B4GALNT2Q8NHY0 566 aa11.25□□□□□ -0.61
SCAF1-202ENST00000595242 GPR119Q8TDV5 335 aa11.25□□□□□ -0.61
SCAF1-202ENST00000595242 TMCO6Q96DC7 493 aa11.25□□□□□ -0.61
SCAF1-202ENST00000595242 ADAD1Q96M93 576 aaKnown RBP11.25□□□□□ -0.61
SCAF1-202ENST00000595242 ERMAPQ96PL5 475 aaPredicted RBP11.25□□□□□ -0.61
SCAF1-202ENST00000595242 TEAD3Q99594 435 aa11.25□□□□□ -0.61
SCAF1-202ENST00000595242 COQ7Q99807 217 aa11.25□□□□□ -0.61
SCAF1-202ENST00000595242 SH3GL3Q99963 347 aa11.25□□□□□ -0.61
SCAF1-202ENST00000595242 KLHDC3Q9BQ90 382 aa11.25□□□□□ -0.61
SCAF1-202ENST00000595242 WDR12Q9GZL7 423 aaKnown RBP11.25□□□□□ -0.61
SCAF1-202ENST00000595242 NDEL1Q9GZM8 345 aa11.25□□□□□ -0.61
SCAF1-202ENST00000595242 OR10A4Q9H209 315 aa11.25□□□□□ -0.61
SCAF1-202ENST00000595242 ZNF175Q9Y473 711 aa11.25□□□□□ -0.61
SCAF1-202ENST00000595242 TRAV36DV7A0A075B6V5 113 aa11.24□□□□□ -0.61
SCAF1-202ENST00000595242 IGLV3-32A0A0A0MS00 114 aa11.24□□□□□ -0.61
SCAF1-202ENST00000595242 CLDN25C9JDP6 229 aa11.24□□□□□ -0.61
SCAF1-202ENST00000595242 LRRN3E7EW58 273 aa11.24□□□□□ -0.61
SCAF1-202ENST00000595242 AKAP8O43823 692 aaKnown RBP11.24□□□□□ -0.61
SCAF1-202ENST00000595242 FZD7O75084 574 aa11.24□□□□□ -0.61
SCAF1-202ENST00000595242 MT-ATP6P00846 226 aa11.24□□□□□ -0.61
SCAF1-202ENST00000595242 SBK2P0C263 348 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms