RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 CLRN1P58418 232 aa8.87□□□□□ -0.99
VPS4B-207ENST00000591519 MRPS34P82930 218 aaKnown RBP8.87□□□□□ -0.99
VPS4B-207ENST00000591519 MYBPC1Q00872 1141 aa8.87□□□□□ -0.99
VPS4B-207ENST00000591519 PLP2Q04941 152 aa8.87□□□□□ -0.99
VPS4B-207ENST00000591519 RPL18Q07020 188 aaKnown RBP8.87□□□□□ -0.99
VPS4B-207ENST00000591519 TBC1D28Q2M2D7 210 aa8.87□□□□□ -0.99
VPS4B-207ENST00000591519 ARMC4Q5T2S8 1044 aa8.87□□□□□ -0.99
VPS4B-207ENST00000591519 HDDC2Q7Z4H3 204 aa8.87□□□□□ -0.99
VPS4B-207ENST00000591519 NANOGNBQ7Z5D8 188 aa8.87□□□□□ -0.99
VPS4B-207ENST00000591519 C1orf174Q8IYL3 243 aa8.87□□□□□ -0.99
VPS4B-207ENST00000591519 CPEB3Q8NE35 698 aaKnown RBP8.87□□□□□ -0.99
VPS4B-207ENST00000591519 TMEM239Q8WW34 195 aa8.87□□□□□ -0.99
VPS4B-207ENST00000591519 ASB10Q8WXI3 467 aa8.87□□□□□ -0.99
VPS4B-207ENST00000591519 NMD3Q96D46 503 aaKnown RBP8.87□□□□□ -0.99
VPS4B-207ENST00000591519 CLPTM1LQ96KA5 538 aa8.87□□□□□ -0.99
VPS4B-207ENST00000591519 PRRC1Q96M27 445 aa8.87□□□□□ -0.99
VPS4B-207ENST00000591519 NSMCE2Q96MF7 247 aa8.87□□□□□ -0.99
VPS4B-207ENST00000591519 TSPAN32Q96QS1 320 aa8.87□□□□□ -0.99
VPS4B-207ENST00000591519 ZNF347Q96SE7 839 aa8.87□□□□□ -0.99
VPS4B-207ENST00000591519 RNF121Q9H920 327 aa8.87□□□□□ -0.99
VPS4B-207ENST00000591519 SMURF2Q9HAU4 748 aa8.87□□□□□ -0.99
VPS4B-207ENST00000591519 CDH20Q9HBT6 801 aa8.87□□□□□ -0.99
VPS4B-207ENST00000591519 INIPQ9NRY2 104 aa8.87□□□□□ -0.99
VPS4B-207ENST00000591519 C20orf141Q9NUB4 165 aa8.87□□□□□ -0.99
VPS4B-207ENST00000591519 DCAF13Q9NV06 445 aaKnown RBP8.87□□□□□ -0.99
VPS4B-207ENST00000591519 TREM2Q9NZC2 230 aa8.87□□□□□ -0.99
VPS4B-207ENST00000591519 STX18Q9P2W9 335 aaKnown RBP8.87□□□□□ -0.99
VPS4B-207ENST00000591519 MAGEL2Q9UJ55 1249 aa8.87□□□□□ -0.99
VPS4B-207ENST00000591519 GRIP1Q9Y3R0 1128 aa8.87□□□□□ -0.99
VPS4B-207ENST00000591519 TRAV20A0A0B4J274 112 aa8.86□□□□□ -0.99
VPS4B-207ENST00000591519 IQCMA0A1B0GVH7 501 aa8.86□□□□□ -0.99
VPS4B-207ENST00000591519 FFAR1O14842 300 aa8.86□□□□□ -0.99
VPS4B-207ENST00000591519 OR7A10O76100 309 aa8.86□□□□□ -0.99
VPS4B-207ENST00000591519 VENTXO95231 258 aa8.86□□□□□ -0.99
VPS4B-207ENST00000591519 F13BP05160 661 aa8.86□□□□□ -0.99
VPS4B-207ENST00000591519 ATP6V1B2P21281 511 aa8.86□□□□□ -0.99
VPS4B-207ENST00000591519 AQP2P41181 271 aa8.86□□□□□ -0.99
VPS4B-207ENST00000591519 DAP3P51398 398 aaKnown RBP8.86□□□□□ -0.99
VPS4B-207ENST00000591519 CCL8P80075 99 aa8.86□□□□□ -0.99
VPS4B-207ENST00000591519 TEKQ02763 1124 aa8.86□□□□□ -0.99
VPS4B-207ENST00000591519 ST3GAL3Q11203 375 aa8.86□□□□□ -0.99
VPS4B-207ENST00000591519 SCGB2A2Q13296 93 aa8.86□□□□□ -0.99
VPS4B-207ENST00000591519 NKPD1Q17RQ9 610 aa8.86□□□□□ -0.99
VPS4B-207ENST00000591519 FAM27BQ5VT28 67 aa8.86□□□□□ -0.99
VPS4B-207ENST00000591519 ACSM5Q6NUN0 579 aa8.86□□□□□ -0.99
VPS4B-207ENST00000591519 TMEM154Q6P9G4 183 aa8.86□□□□□ -0.99
VPS4B-207ENST00000591519 USP43Q70EL4 1123 aa8.86□□□□□ -0.99
VPS4B-207ENST00000591519 CYP4Z1Q86W10 505 aa8.86□□□□□ -0.99
VPS4B-207ENST00000591519 ALDH16A1Q8IZ83 802 aa8.86□□□□□ -0.99
VPS4B-207ENST00000591519 TEX29Q8N6K0 151 aa8.86□□□□□ -0.99
VPS4B-207ENST00000591519 NOXO1Q8NFA2 376 aa8.86□□□□□ -0.99
VPS4B-207ENST00000591519 OR51F2Q8NH61 342 aa8.86□□□□□ -0.99
VPS4B-207ENST00000591519 CCDC124Q96CT7 223 aaKnown RBP8.86□□□□□ -0.99
VPS4B-207ENST00000591519 SGTBQ96EQ0 304 aa8.86□□□□□ -0.99
VPS4B-207ENST00000591519 POM121L2Q96KW2 1035 aa8.86□□□□□ -0.99
VPS4B-207ENST00000591519 THTPAQ9BU02 230 aa8.86□□□□□ -0.99
VPS4B-207ENST00000591519 METTL17Q9H7H0 456 aaPredicted RBP8.86□□□□□ -0.99
VPS4B-207ENST00000591519 G6PC2Q9NQR9 355 aa8.86□□□□□ -0.99
VPS4B-207ENST00000591519 KLHL21Q9UJP4 597 aa8.86□□□□□ -0.99
VPS4B-207ENST00000591519 SAMD4AQ9UPU9 718 aaKnown RBP8.86□□□□□ -0.99
VPS4B-207ENST00000591519 MED31Q9Y3C7 131 aa8.86□□□□□ -0.99
VPS4B-207ENST00000591519 FAM32AQ9Y421 112 aaKnown RBP8.86□□□□□ -0.99
VPS4B-207ENST00000591519 IGHV1-69-2A0A0G2JMI3 117 aa8.85□□□□□ -0.99
VPS4B-207ENST00000591519 ICMTO60725 284 aa8.85□□□□□ -0.99
VPS4B-207ENST00000591519 DEAF1O75398 565 aaPredicted RBP8.85□□□□□ -0.99
VPS4B-207ENST00000591519 MT-ND5P03915 603 aa8.85□□□□□ -0.99
VPS4B-207ENST00000591519 LCKP06239 509 aa8.85□□□□□ -0.99
VPS4B-207ENST00000591519 ADH4P08319 380 aa8.85□□□□□ -0.99
VPS4B-207ENST00000591519 IFI30P13284 250 aa8.85□□□□□ -0.99
VPS4B-207ENST00000591519 STOMP27105 288 aa8.85□□□□□ -0.99
VPS4B-207ENST00000591519 MMP15P51511 669 aa8.85□□□□□ -0.99
VPS4B-207ENST00000591519 ERVS71-1P61550 626 aa8.85□□□□□ -0.99
VPS4B-207ENST00000591519 TRAM2Q15035 370 aa8.85□□□□□ -0.99
VPS4B-207ENST00000591519 TAF11Q15544 211 aa8.85□□□□□ -0.99
VPS4B-207ENST00000591519 PABPC1L2AQ5JQF8 200 aa8.85□□□□□ -0.99
VPS4B-207ENST00000591519 FGD3Q5JSP0 725 aa8.85□□□□□ -0.99
VPS4B-207ENST00000591519 FAM209AQ5JX71 171 aa8.85□□□□□ -0.99
VPS4B-207ENST00000591519 SLC25A47Q6Q0C1 308 aa8.85□□□□□ -0.99
VPS4B-207ENST00000591519 TBPL2Q6SJ96 375 aa8.85□□□□□ -0.99
VPS4B-207ENST00000591519 UNQ6126/PRO20091Q6UXV3 157 aa8.85□□□□□ -0.99
VPS4B-207ENST00000591519 ZNF730Q6ZMV8 503 aa8.85□□□□□ -0.99
VPS4B-207ENST00000591519 TSEN54Q7Z6J9 526 aaKnown RBP8.85□□□□□ -0.99
VPS4B-207ENST00000591519 LRRC18Q8N456 261 aa8.85□□□□□ -0.99
VPS4B-207ENST00000591519 SYT14Q8NB59 555 aa8.85□□□□□ -0.99
VPS4B-207ENST00000591519 SEMA6DQ8NFY4 1073 aa8.85□□□□□ -0.99
VPS4B-207ENST00000591519 OR1J1Q8NGS3 322 aa8.85□□□□□ -0.99
VPS4B-207ENST00000591519 OR52J3Q8NH60 311 aa8.85□□□□□ -0.99
VPS4B-207ENST00000591519 FNDC8Q8TC99 324 aa8.85□□□□□ -0.99
VPS4B-207ENST00000591519 SNX33Q8WV41 574 aa8.85□□□□□ -0.99
VPS4B-207ENST00000591519 NABP1Q96AH0 204 aa8.85□□□□□ -0.99
VPS4B-207ENST00000591519 MARS2Q96GW9 593 aaKnown RBP8.85□□□□□ -0.99
VPS4B-207ENST00000591519 PYURFQ96I23 114 aa8.85□□□□□ -0.99
VPS4B-207ENST00000591519 KCNN2Q9H2S1 579 aa8.85□□□□□ -0.99
VPS4B-207ENST00000591519 TXNIPQ9H3M7 391 aa8.85□□□□□ -0.99
VPS4B-207ENST00000591519 GORASP2Q9H8Y8 452 aa8.85□□□□□ -0.99
VPS4B-207ENST00000591519 MAN2C1Q9NTJ4 1040 aa8.85□□□□□ -0.99
VPS4B-207ENST00000591519 TAS2R1Q9NYW7 299 aa8.85□□□□□ -0.99
VPS4B-207ENST00000591519 HIF3AQ9Y2N7 669 aa8.85□□□□□ -0.99
VPS4B-207ENST00000591519 UGT2A1Q9Y4X1 527 aa8.85□□□□□ -0.99
VPS4B-207ENST00000591519 ENPP4Q9Y6X5 453 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms