RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 KIR3DL2P43630 455 aa8.91□□□□□ -0.98
VPS25-202ENST00000589219 RAB25P57735 213 aa8.91□□□□□ -0.98
VPS25-202ENST00000589219 POU3F1Q03052 451 aaPredicted RBP8.91□□□□□ -0.98
VPS25-202ENST00000589219 DYRK1AQ13627 763 aa8.91□□□□□ -0.98
VPS25-202ENST00000589219 EIF2B1Q14232 305 aaKnown RBP8.91□□□□□ -0.98
VPS25-202ENST00000589219 GPR176Q14439 515 aa8.91□□□□□ -0.98
VPS25-202ENST00000589219 CARTPTQ16568 116 aa8.91□□□□□ -0.98
VPS25-202ENST00000589219 ZNF239Q16600 458 aaKnown RBP8.91□□□□□ -0.98
VPS25-202ENST00000589219 MEP1BQ16820 701 aa8.91□□□□□ -0.98
VPS25-202ENST00000589219 PCK2Q16822 640 aa8.91□□□□□ -0.98
VPS25-202ENST00000589219 TBRG1Q3YBR2 411 aa8.91□□□□□ -0.98
VPS25-202ENST00000589219 ZFP69Q49AA0 526 aa8.91□□□□□ -0.98
VPS25-202ENST00000589219 WDR38Q5JTN6 314 aa8.91□□□□□ -0.98
VPS25-202ENST00000589219 TMEM164Q5U3C3 297 aa8.91□□□□□ -0.98
VPS25-202ENST00000589219 TIGD3Q6B0B8 471 aa8.91□□□□□ -0.98
VPS25-202ENST00000589219 LCN10Q6JVE6 187 aa8.91□□□□□ -0.98
VPS25-202ENST00000589219 DEGS2Q6QHC5 323 aa8.91□□□□□ -0.98
VPS25-202ENST00000589219 PCSK4Q6UW60 755 aa8.91□□□□□ -0.98
VPS25-202ENST00000589219 ARSKQ6UWY0 536 aa8.91□□□□□ -0.98
VPS25-202ENST00000589219 STAC2Q6ZMT1 411 aa8.91□□□□□ -0.98
VPS25-202ENST00000589219 KRT77Q7Z794 578 aa8.91□□□□□ -0.98
VPS25-202ENST00000589219 LRRTM1Q86UE6 522 aa8.91□□□□□ -0.98
VPS25-202ENST00000589219 SLC26A10Q8NG04 563 aa8.91□□□□□ -0.98
VPS25-202ENST00000589219 OR2Y1Q8NGV0 311 aa8.91□□□□□ -0.98
VPS25-202ENST00000589219 TSEN15Q8WW01 171 aaKnown RBP8.91□□□□□ -0.98
VPS25-202ENST00000589219 YIPF5Q969M3 257 aa8.91□□□□□ -0.98
VPS25-202ENST00000589219 UPRTQ96BW1 309 aa8.91□□□□□ -0.98
VPS25-202ENST00000589219 RNF31Q96EP0 1072 aa8.91□□□□□ -0.98
VPS25-202ENST00000589219 FAM210AQ96ND0 272 aa8.91□□□□□ -0.98
VPS25-202ENST00000589219 KCNK17Q96T54 332 aa8.91□□□□□ -0.98
VPS25-202ENST00000589219 GFI1Q99684 422 aa8.91□□□□□ -0.98
VPS25-202ENST00000589219 B3GNT4Q9C0J1 378 aa8.91□□□□□ -0.98
VPS25-202ENST00000589219 OR2B2Q9GZK3 357 aa8.91□□□□□ -0.98
VPS25-202ENST00000589219 ABCG5Q9H222 651 aa8.91□□□□□ -0.98
VPS25-202ENST00000589219 DPAGT1Q9H3H5 408 aa8.91□□□□□ -0.98
VPS25-202ENST00000589219 ELOVL3Q9HB03 270 aa8.91□□□□□ -0.98
VPS25-202ENST00000589219 HDGFL3Q9Y3E1 203 aa8.91□□□□□ -0.98
VPS25-202ENST00000589219 PTRH2Q9Y3E5 179 aaKnown RBP8.91□□□□□ -0.98
VPS25-202ENST00000589219 LOXL2Q9Y4K0 774 aa8.91□□□□□ -0.98
VPS25-202ENST00000589219 PMS2P1A4D2B8 440 aa8.9□□□□□ -0.98
VPS25-202ENST00000589219 C2orf72A6NCS6 295 aa8.9□□□□□ -0.98
VPS25-202ENST00000589219 INMT-MINDY4F8WBC2 141 aa8.9□□□□□ -0.98
VPS25-202ENST00000589219 MS4A18H0YCH9 400 aa8.9□□□□□ -0.98
VPS25-202ENST00000589219 WISP1O95388 367 aa8.9□□□□□ -0.98
VPS25-202ENST00000589219 ECDO95905 644 aaPredicted RBP8.9□□□□□ -0.98
VPS25-202ENST00000589219 CD2P06729 351 aa8.9□□□□□ -0.98
VPS25-202ENST00000589219 UMODP07911 640 aa8.9□□□□□ -0.98
VPS25-202ENST00000589219 LIPCP11150 499 aa8.9□□□□□ -0.98
VPS25-202ENST00000589219 NR2C1P13056 603 aa8.9□□□□□ -0.98
VPS25-202ENST00000589219 PLA2G2AP14555 144 aa8.9□□□□□ -0.98
VPS25-202ENST00000589219 IFNGR1P15260 489 aa8.9□□□□□ -0.98
VPS25-202ENST00000589219 FSTP19883 344 aa8.9□□□□□ -0.98
VPS25-202ENST00000589219 IL11P20809 199 aa8.9□□□□□ -0.98
VPS25-202ENST00000589219 ACHEP22303 614 aa8.9□□□□□ -0.98
VPS25-202ENST00000589219 FOLR3P41439 243 aa8.9□□□□□ -0.98
VPS25-202ENST00000589219 SOX2P48431 317 aa8.9□□□□□ -0.98
VPS25-202ENST00000589219 AP3S2P59780 193 aa8.9□□□□□ -0.98
VPS25-202ENST00000589219 TOMM20Q15388 145 aa8.9□□□□□ -0.98
VPS25-202ENST00000589219 TATDN3Q17R31 274 aa8.9□□□□□ -0.98
VPS25-202ENST00000589219 MS4A18Q3C1V0 323 aa8.9□□□□□ -0.98
VPS25-202ENST00000589219 PLA1AQ53H76 456 aa8.9□□□□□ -0.98
VPS25-202ENST00000589219 HES5Q5TA89 166 aa8.9□□□□□ -0.98
VPS25-202ENST00000589219 SLC22A10Q63ZE4 541 aa8.9□□□□□ -0.98
VPS25-202ENST00000589219 OR5M10Q6IEU7 315 aa8.9□□□□□ -0.98
VPS25-202ENST00000589219 FAM199XQ6PEV8 388 aaPredicted RBP8.9□□□□□ -0.98
VPS25-202ENST00000589219 SYT9Q86SS6 491 aa8.9□□□□□ -0.98
VPS25-202ENST00000589219 CATSPERDQ86XM0 798 aa8.9□□□□□ -0.98
VPS25-202ENST00000589219 UEVLDQ8IX04 471 aa8.9□□□□□ -0.98
VPS25-202ENST00000589219 TCTE3Q8IZS6 198 aa8.9□□□□□ -0.98
VPS25-202ENST00000589219 PRSS35Q8N3Z0 413 aa8.9□□□□□ -0.98
VPS25-202ENST00000589219 TOMM5Q8N4H5 51 aa8.9□□□□□ -0.98
VPS25-202ENST00000589219 ZNF433Q8N7K0 673 aaPredicted RBP8.9□□□□□ -0.98
VPS25-202ENST00000589219 NOXO1Q8NFA2 376 aa8.9□□□□□ -0.98
VPS25-202ENST00000589219 OR10H5Q8NGA6 315 aa8.9□□□□□ -0.98
VPS25-202ENST00000589219 POC1BQ8TC44 478 aa8.9□□□□□ -0.98
VPS25-202ENST00000589219 MIB2Q96AX9 1013 aa8.9□□□□□ -0.98
VPS25-202ENST00000589219 SLC25A38Q96DW6 304 aa8.9□□□□□ -0.98
VPS25-202ENST00000589219 DNAJA3Q96EY1 480 aa8.9□□□□□ -0.98
VPS25-202ENST00000589219 ST6GAL2Q96JF0 529 aa8.9□□□□□ -0.98
VPS25-202ENST00000589219 ARL5BQ96KC2 179 aa8.9□□□□□ -0.98
VPS25-202ENST00000589219 ABHD1Q96SE0 405 aa8.9□□□□□ -0.98
VPS25-202ENST00000589219 AMELYQ99218 206 aa8.9□□□□□ -0.98
VPS25-202ENST00000589219 SMAD5Q99717 465 aaKnown RBP8.9□□□□□ -0.98
VPS25-202ENST00000589219 MESP1Q9BRJ9 268 aa8.9□□□□□ -0.98
VPS25-202ENST00000589219 TRAF4Q9BUZ4 470 aaPredicted RBP8.9□□□□□ -0.98
VPS25-202ENST00000589219 ABHD6Q9BV23 337 aa8.9□□□□□ -0.98
VPS25-202ENST00000589219 ULBP3Q9BZM4 244 aa8.9□□□□□ -0.98
VPS25-202ENST00000589219 LIN7BQ9HAP6 207 aa8.9□□□□□ -0.98
VPS25-202ENST00000589219 NEK6Q9HC98 313 aa8.9□□□□□ -0.98
VPS25-202ENST00000589219 ZNF275Q9NSD4 429 aaPredicted RBP8.9□□□□□ -0.98
VPS25-202ENST00000589219 KLHL9Q9P2J3 617 aa8.9□□□□□ -0.98
VPS25-202ENST00000589219 NLKQ9UBE8 527 aa8.9□□□□□ -0.98
VPS25-202ENST00000589219 FOXJ3Q9UPW0 622 aa8.9□□□□□ -0.98
VPS25-202ENST00000589219 RPH3AQ9Y2J0 694 aaPredicted RBP8.9□□□□□ -0.98
VPS25-202ENST00000589219 COA3Q9Y2R0 106 aaPredicted RBP8.9□□□□□ -0.98
VPS25-202ENST00000589219 NUBP2Q9Y5Y2 271 aa8.9□□□□□ -0.98
VPS25-202ENST00000589219 ALG5Q9Y673 324 aa8.9□□□□□ -0.98
VPS25-202ENST00000589219 R4GMQ9 66 aa8.9□□□□□ -0.98
VPS25-202ENST00000589219 A0A0B4J203 849 aa8.89□□□□□ -0.99
VPS25-202ENST00000589219 A0A0B4J293 547 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms