RNA–Protein interactions for RNA: ENST00000589055.3

TMEM259-206, Transcript of transmembrane protein 259, human

TSL 3

Gene TMEM259, Length 791 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMEM259-206	ENST00000589055	RAP1A	P62834	184 aa		13.63	□□□□□ -0.23
TMEM259-206	ENST00000589055	DBP	Q10586	325 aa	Predicted RBP	13.63	□□□□□ -0.23
TMEM259-206	ENST00000589055	FAM122B	Q7Z309	247 aa		13.63	□□□□□ -0.23
TMEM259-206	ENST00000589055	OR52J3	Q8NH60	311 aa		13.63	□□□□□ -0.23
TMEM259-206	ENST00000589055	CLDND2	Q8NHS1	167 aa		13.63	□□□□□ -0.23
TMEM259-206	ENST00000589055	ABHD4	Q8TB40	342 aa		13.63	□□□□□ -0.23
TMEM259-206	ENST00000589055	SLC25A40	Q8TBP6	338 aa		13.63	□□□□□ -0.23
TMEM259-206	ENST00000589055	SNX33	Q8WV41	574 aa		13.63	□□□□□ -0.23
TMEM259-206	ENST00000589055	ZNF570	Q96NI8	536 aa		13.63	□□□□□ -0.23
TMEM259-206	ENST00000589055	GPA33	Q99795	319 aa		13.63	□□□□□ -0.23
TMEM259-206	ENST00000589055	LRMDA	Q9H2I8	198 aa		13.63	□□□□□ -0.23
TMEM259-206	ENST00000589055	LPAR2	Q9HBW0	351 aa		13.63	□□□□□ -0.23
TMEM259-206	ENST00000589055	POLE4	Q9NR33	117 aa		13.63	□□□□□ -0.23
TMEM259-206	ENST00000589055	DCAF13	Q9NV06	445 aa	Known RBP	13.63	□□□□□ -0.23
TMEM259-206	ENST00000589055	SIGLEC7	Q9Y286	467 aa		13.63	□□□□□ -0.23
TMEM259-206	ENST00000589055	CACNG2	Q9Y698	323 aa		13.63	□□□□□ -0.23
TMEM259-206	ENST00000589055		A0A1W2PRQ8	180 aa		13.62	□□□□□ -0.23
TMEM259-206	ENST00000589055	GMNC	A6NCL1	334 aa		13.62	□□□□□ -0.23
TMEM259-206	ENST00000589055	FAM157A	C9JC47	383 aa		13.62	□□□□□ -0.23
TMEM259-206	ENST00000589055	PPIH	O43447	177 aa	Known RBP	13.62	□□□□□ -0.23
TMEM259-206	ENST00000589055	ATP8B1	O43520	1251 aa		13.62	□□□□□ -0.23
TMEM259-206	ENST00000589055	CTLA4	P16410	223 aa		13.62	□□□□□ -0.23
TMEM259-206	ENST00000589055	MSR1	P21757	451 aa		13.62	□□□□□ -0.23
TMEM259-206	ENST00000589055	RBMX	P38159	391 aa	Known RBP	13.62	□□□□□ -0.23
TMEM259-206	ENST00000589055	OMP	P47874	163 aa		13.62	□□□□□ -0.23
TMEM259-206	ENST00000589055	CDH15	P55291	814 aa		13.62	□□□□□ -0.23
TMEM259-206	ENST00000589055	SELENOV	P59797	346 aa		13.62	□□□□□ -0.23
TMEM259-206	ENST00000589055	KRR1	Q13601	381 aa	Known RBP	13.62	□□□□□ -0.23
TMEM259-206	ENST00000589055	DGCR6	Q14129	220 aa		13.62	□□□□□ -0.23
TMEM259-206	ENST00000589055	TST	Q16762	297 aa	Known RBP	13.62	□□□□□ -0.23
TMEM259-206	ENST00000589055	ANKDD1A	Q495B1	522 aa		13.62	□□□□□ -0.23
TMEM259-206	ENST00000589055	AVPI1	Q5T686	147 aa		13.62	□□□□□ -0.23
TMEM259-206	ENST00000589055	TMEM154	Q6P9G4	183 aa		13.62	□□□□□ -0.23
TMEM259-206	ENST00000589055	RRM2B	Q7LG56	351 aa		13.62	□□□□□ -0.23
TMEM259-206	ENST00000589055	LINC01356	Q8N9X3	169 aa		13.62	□□□□□ -0.23
TMEM259-206	ENST00000589055	HPS1	Q92902	700 aa		13.62	□□□□□ -0.23
TMEM259-206	ENST00000589055	RSRC1	Q96IZ7	334 aa	Known RBP	13.62	□□□□□ -0.23
TMEM259-206	ENST00000589055	OR2J1	Q9GZK6	312 aa		13.62	□□□□□ -0.23
TMEM259-206	ENST00000589055	NSRP1	Q9H0G5	558 aa	Known RBP	13.62	□□□□□ -0.23
TMEM259-206	ENST00000589055	POFUT1	Q9H488	388 aa		13.62	□□□□□ -0.23
TMEM259-206	ENST00000589055	ANKRD19P	Q9H560	264 aa		13.62	□□□□□ -0.23
TMEM259-206	ENST00000589055	RERGL	Q9H628	205 aa		13.62	□□□□□ -0.23
TMEM259-206	ENST00000589055	ARL8B	Q9NVJ2	186 aa		13.62	□□□□□ -0.23
TMEM259-206	ENST00000589055	SLCO1C1	Q9NYB5	712 aa		13.62	□□□□□ -0.23
TMEM259-206	ENST00000589055	TREM2	Q9NZC2	230 aa		13.62	□□□□□ -0.23
TMEM259-206	ENST00000589055	GRHPR	Q9UBQ7	328 aa		13.62	□□□□□ -0.23
TMEM259-206	ENST00000589055	ZSCAN5B	A6NJL1	495 aa		13.61	□□□□□ -0.23
TMEM259-206	ENST00000589055	SOCS2	O14508	198 aa		13.61	□□□□□ -0.23
TMEM259-206	ENST00000589055	NDUFAB1	O14561	156 aa		13.61	□□□□□ -0.23
TMEM259-206	ENST00000589055	XKRY	O14609	159 aa		13.61	□□□□□ -0.23
TMEM259-206	ENST00000589055	PTP4A3	O75365	173 aa		13.61	□□□□□ -0.23
TMEM259-206	ENST00000589055	MPZL1	O95297	269 aa		13.61	□□□□□ -0.23
TMEM259-206	ENST00000589055	GPANK1	O95872	356 aa		13.61	□□□□□ -0.23
TMEM259-206	ENST00000589055	RHCE	P18577	417 aa		13.61	□□□□□ -0.23
TMEM259-206	ENST00000589055	GNGT1	P63211	74 aa		13.61	□□□□□ -0.23
TMEM259-206	ENST00000589055	PTCHD4	Q6ZW05	846 aa		13.61	□□□□□ -0.23
TMEM259-206	ENST00000589055	CPLX4	Q7Z7G2	160 aa		13.61	□□□□□ -0.23
TMEM259-206	ENST00000589055	MARS2	Q96GW9	593 aa	Known RBP	13.61	□□□□□ -0.23
TMEM259-206	ENST00000589055	RACGAP1	Q9H0H5	632 aa		13.61	□□□□□ -0.23
TMEM259-206	ENST00000589055	SYT4	Q9H2B2	425 aa		13.61	□□□□□ -0.23
TMEM259-206	ENST00000589055	SAMD4A	Q9UPU9	718 aa	Known RBP	13.61	□□□□□ -0.23
TMEM259-206	ENST00000589055	TMEM5	Q9Y2B1	443 aa		13.61	□□□□□ -0.23
TMEM259-206	ENST00000589055	FAM32A	Q9Y421	112 aa	Known RBP	13.61	□□□□□ -0.23
TMEM259-206	ENST00000589055	TIMM10B	Q9Y5J6	103 aa		13.61	□□□□□ -0.23
TMEM259-206	ENST00000589055	PRSS37	A4D1T9	235 aa		13.6	□□□□□ -0.23
TMEM259-206	ENST00000589055	UNC119B	A6NIH7	251 aa		13.6	□□□□□ -0.23
TMEM259-206	ENST00000589055	NDUFB2	O95178	105 aa		13.6	□□□□□ -0.23
TMEM259-206	ENST00000589055	IGHV3-13	P01766	116 aa		13.6	□□□□□ -0.23
TMEM259-206	ENST00000589055	SEMG1	P04279	462 aa		13.6	□□□□□ -0.23
TMEM259-206	ENST00000589055	PPP1CB	P62140	327 aa		13.6	□□□□□ -0.23
TMEM259-206	ENST00000589055	MVK	Q03426	396 aa		13.6	□□□□□ -0.23
TMEM259-206	ENST00000589055	SPRN	Q5BIV9	151 aa		13.6	□□□□□ -0.23
TMEM259-206	ENST00000589055	RINL	Q6ZS11	566 aa		13.6	□□□□□ -0.23
TMEM259-206	ENST00000589055	USP51	Q70EK9	711 aa		13.6	□□□□□ -0.23
TMEM259-206	ENST00000589055	FNDC8	Q8TC99	324 aa		13.6	□□□□□ -0.23
TMEM259-206	ENST00000589055	KLF14	Q8TD94	323 aa	Predicted RBP	13.6	□□□□□ -0.23
TMEM259-206	ENST00000589055	SLC7A6	Q92536	515 aa		13.6	□□□□□ -0.23
TMEM259-206	ENST00000589055	C1orf159	Q96HA4	380 aa		13.6	□□□□□ -0.23
TMEM259-206	ENST00000589055	DHRS1	Q96LJ7	313 aa		13.6	□□□□□ -0.23
TMEM259-206	ENST00000589055	FUZ	Q9BT04	418 aa		13.6	□□□□□ -0.23
TMEM259-206	ENST00000589055	EIF3K	Q9UBQ5	218 aa	Known RBP	13.6	□□□□□ -0.23
TMEM259-206	ENST00000589055	COA3	Q9Y2R0	106 aa	Predicted RBP	13.6	□□□□□ -0.23
TMEM259-206	ENST00000589055	IER3IP1	Q9Y5U9	82 aa		13.6	□□□□□ -0.23
TMEM259-206	ENST00000589055	ARPC2	O15144	300 aa		13.59	□□□□□ -0.23
TMEM259-206	ENST00000589055	TPD52L2	O43399	206 aa	Known RBP	13.59	□□□□□ -0.23
TMEM259-206	ENST00000589055	SPRY3	O43610	288 aa		13.59	□□□□□ -0.23
TMEM259-206	ENST00000589055	DOK2	O60496	412 aa		13.59	□□□□□ -0.23
TMEM259-206	ENST00000589055	SLC16A7	O60669	478 aa		13.59	□□□□□ -0.23
TMEM259-206	ENST00000589055	PPP1R3D	O95685	299 aa		13.59	□□□□□ -0.23
TMEM259-206	ENST00000589055	IGHV1-46	P01743	117 aa		13.59	□□□□□ -0.23
TMEM259-206	ENST00000589055	HNF1A	P20823	631 aa		13.59	□□□□□ -0.23
TMEM259-206	ENST00000589055	GCH1	P30793	250 aa		13.59	□□□□□ -0.23
TMEM259-206	ENST00000589055	SDHA	P31040	664 aa		13.59	□□□□□ -0.23
TMEM259-206	ENST00000589055	GUCA1A	P43080	201 aa	Predicted RBP	13.59	□□□□□ -0.23
TMEM259-206	ENST00000589055	ZNF81	P51508	661 aa		13.59	□□□□□ -0.23
TMEM259-206	ENST00000589055	MMP15	P51511	669 aa		13.59	□□□□□ -0.23
TMEM259-206	ENST00000589055	PCBD1	P61457	104 aa		13.59	□□□□□ -0.23
TMEM259-206	ENST00000589055	MRPS11	P82912	194 aa	Known RBP	13.59	□□□□□ -0.23
TMEM259-206	ENST00000589055	SPIB	Q01892	262 aa		13.59	□□□□□ -0.23
TMEM259-206	ENST00000589055	KRTAP24-1	Q3LI83	254 aa		13.59	□□□□□ -0.23

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