RNA–Protein interactions for RNA: ENST00000587170.1

CXXC1-208, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-208ENST00000587170 OR5V1Q9UGF6 321 aa11.86□□□□□ -0.51
CXXC1-208ENST00000587170 SLC7A7Q9UM01 511 aa11.86□□□□□ -0.51
CXXC1-208ENST00000587170 IGKV1D-43A0A0B4J1Z2 117 aa11.85□□□□□ -0.51
CXXC1-208ENST00000587170 GMNCA6NCL1 334 aa11.85□□□□□ -0.51
CXXC1-208ENST00000587170 MCIDASD6RGH6 385 aa11.85□□□□□ -0.51
CXXC1-208ENST00000587170 KPNA4O00629 521 aaPredicted RBP11.85□□□□□ -0.51
CXXC1-208ENST00000587170 HIST1H2ABP04908 130 aa11.85□□□□□ -0.51
CXXC1-208ENST00000587170 F13BP05160 661 aa11.85□□□□□ -0.51
CXXC1-208ENST00000587170 TNFRSF1AP19438 455 aa11.85□□□□□ -0.51
CXXC1-208ENST00000587170 CD247P20963 164 aa11.85□□□□□ -0.51
CXXC1-208ENST00000587170 KITLGP21583 273 aa11.85□□□□□ -0.51
CXXC1-208ENST00000587170 MDH2P40926 338 aaKnown RBP11.85□□□□□ -0.51
CXXC1-208ENST00000587170 SLC18A1P54219 525 aa11.85□□□□□ -0.51
CXXC1-208ENST00000587170 FMODQ06828 376 aa11.85□□□□□ -0.51
CXXC1-208ENST00000587170 PSG7Q13046 419 aa11.85□□□□□ -0.51
CXXC1-208ENST00000587170 ZNF362Q5T0B9 420 aaPredicted RBP11.85□□□□□ -0.51
CXXC1-208ENST00000587170 EPGNQ6UW88 154 aa11.85□□□□□ -0.51
CXXC1-208ENST00000587170 SPATC1Q76KD6 591 aa11.85□□□□□ -0.51
CXXC1-208ENST00000587170 HIST3H2AQ7L7L0 130 aa11.85□□□□□ -0.51
CXXC1-208ENST00000587170 RBM45Q8IUH3 476 aaKnown RBP11.85□□□□□ -0.51
CXXC1-208ENST00000587170 MUC20Q8N307 709 aaPredicted RBP11.85□□□□□ -0.51
CXXC1-208ENST00000587170 C11orf65Q8NCR3 313 aa11.85□□□□□ -0.51
CXXC1-208ENST00000587170 HIST1H2ACQ93077 130 aa11.85□□□□□ -0.51
CXXC1-208ENST00000587170 MMP27Q9H306 513 aa11.85□□□□□ -0.51
CXXC1-208ENST00000587170 ELOVL3Q9HB03 270 aa11.85□□□□□ -0.51
CXXC1-208ENST00000587170 PLXNB1O43157 2135 aa11.84□□□□□ -0.51
CXXC1-208ENST00000587170 IGHV2-70DA0A0C4DH43 119 aa11.84□□□□□ -0.51
CXXC1-208ENST00000587170 TMEM120BA0PK00 339 aa11.84□□□□□ -0.51
CXXC1-208ENST00000587170 CEACAM18A8MTB9 384 aa11.84□□□□□ -0.51
CXXC1-208ENST00000587170 BLOC1S5-TXNDC5H3BN57 136 aa11.84□□□□□ -0.51
CXXC1-208ENST00000587170 NDUFA7O95182 113 aa11.84□□□□□ -0.51
CXXC1-208ENST00000587170 FSTL3O95633 263 aa11.84□□□□□ -0.51
CXXC1-208ENST00000587170 MT-ND1P03886 318 aa11.84□□□□□ -0.51
CXXC1-208ENST00000587170 CST2P09228 141 aa11.84□□□□□ -0.51
CXXC1-208ENST00000587170 UMPSP11172 480 aa11.84□□□□□ -0.51
CXXC1-208ENST00000587170 NR2C1P13056 603 aa11.84□□□□□ -0.51
CXXC1-208ENST00000587170 TUBG1P23258 451 aa11.84□□□□□ -0.51
CXXC1-208ENST00000587170 TNFSF4P23510 183 aa11.84□□□□□ -0.51
CXXC1-208ENST00000587170 STX1BP61266 288 aa11.84□□□□□ -0.51
CXXC1-208ENST00000587170 ERVK-25P63136 954 aa11.84□□□□□ -0.51
CXXC1-208ENST00000587170 FAM205BPQ63HN1 556 aa11.84□□□□□ -0.51
CXXC1-208ENST00000587170 SLC25A47Q6Q0C1 308 aa11.84□□□□□ -0.51
CXXC1-208ENST00000587170 DLEU7Q6UYE1 221 aa11.84□□□□□ -0.51
CXXC1-208ENST00000587170 Q6ZR03 302 aa11.84□□□□□ -0.51
CXXC1-208ENST00000587170 RHOUQ7L0Q8 258 aa11.84□□□□□ -0.51
CXXC1-208ENST00000587170 ANKRD42Q8N9B4 389 aa11.84□□□□□ -0.51
CXXC1-208ENST00000587170 NPEPL1Q8NDH3 523 aa11.84□□□□□ -0.51
CXXC1-208ENST00000587170 OR4F5Q8NH21 305 aa11.84□□□□□ -0.51
CXXC1-208ENST00000587170 VANGL1Q8TAA9 524 aaPredicted RBP11.84□□□□□ -0.51
CXXC1-208ENST00000587170 HDAC2Q92769 488 aaKnown RBP11.84□□□□□ -0.51
CXXC1-208ENST00000587170 DCLRE1CQ96SD1 692 aaKnown RBP11.84□□□□□ -0.51
CXXC1-208ENST00000587170 TUBG2Q9NRH3 451 aa11.84□□□□□ -0.51
CXXC1-208ENST00000587170 INIPQ9NRY2 104 aa11.84□□□□□ -0.51
CXXC1-208ENST00000587170 MAN2C1Q9NTJ4 1040 aa11.84□□□□□ -0.51
CXXC1-208ENST00000587170 IL19Q9UHD0 177 aa11.84□□□□□ -0.51
CXXC1-208ENST00000587170 SOX21Q9Y651 276 aaPredicted RBP11.84□□□□□ -0.51
CXXC1-208ENST00000587170 TET2Q6N021 2002 aaPredicted RBP11.84□□□□□ -0.51
CXXC1-208ENST00000587170 TRAV40A0A0B4J280 105 aa11.83□□□□□ -0.52
CXXC1-208ENST00000587170 EVPLLA8MZ36 301 aa11.83□□□□□ -0.52
CXXC1-208ENST00000587170 SRRM5B3KS81 715 aa11.83□□□□□ -0.52
CXXC1-208ENST00000587170 TMEM178BH3BS89 294 aa11.83□□□□□ -0.52
CXXC1-208ENST00000587170 IFNL4K9M1U5 179 aa11.83□□□□□ -0.52
CXXC1-208ENST00000587170 HOXA3O43365 443 aaPredicted RBP11.83□□□□□ -0.52
CXXC1-208ENST00000587170 TIMM8AO60220 97 aaPredicted RBP11.83□□□□□ -0.52
CXXC1-208ENST00000587170 OR7A10O76100 309 aa11.83□□□□□ -0.52
CXXC1-208ENST00000587170 KNG1P01042 644 aa11.83□□□□□ -0.52
CXXC1-208ENST00000587170 OPN1SWP03999 348 aa11.83□□□□□ -0.52
CXXC1-208ENST00000587170 WNT2P09544 360 aa11.83□□□□□ -0.52
CXXC1-208ENST00000587170 OMGP23515 440 aa11.83□□□□□ -0.52
CXXC1-208ENST00000587170 RBMXP38159 391 aaKnown RBP11.83□□□□□ -0.52
CXXC1-208ENST00000587170 RBM34P42696 430 aaKnown RBP11.83□□□□□ -0.52
CXXC1-208ENST00000587170 MMP16P51512 607 aa11.83□□□□□ -0.52
CXXC1-208ENST00000587170 ARHGDIAP52565 204 aa11.83□□□□□ -0.52
CXXC1-208ENST00000587170 RELBQ01201 579 aa11.83□□□□□ -0.52
CXXC1-208ENST00000587170 SRSF4Q08170 494 aaKnown RBP11.83□□□□□ -0.52
CXXC1-208ENST00000587170 LRRN1Q6UXK5 716 aa11.83□□□□□ -0.52
CXXC1-208ENST00000587170 ALDH16A1Q8IZ83 802 aa11.83□□□□□ -0.52
CXXC1-208ENST00000587170 POU5F2Q8N7G0 328 aa11.83□□□□□ -0.52
CXXC1-208ENST00000587170 THOC1Q96FV9 657 aaKnown RBP11.83□□□□□ -0.52
CXXC1-208ENST00000587170 C4orf45Q96LM5 186 aa11.83□□□□□ -0.52
CXXC1-208ENST00000587170 ALG12Q9BV10 488 aa11.83□□□□□ -0.52
CXXC1-208ENST00000587170 SSBP3Q9BWW4 388 aaPredicted RBP11.83□□□□□ -0.52
CXXC1-208ENST00000587170 BEX1Q9HBH7 125 aa11.83□□□□□ -0.52
CXXC1-208ENST00000587170 TBCCD1Q9NVR7 557 aa11.83□□□□□ -0.52
CXXC1-208ENST00000587170 PPP1R3CQ9UQK1 317 aa11.83□□□□□ -0.52
CXXC1-208ENST00000587170 ZNF281Q9Y2X9 895 aa11.83□□□□□ -0.52
CXXC1-208ENST00000587170 USH1CQ9Y6N9 552 aa11.83□□□□□ -0.52
CXXC1-208ENST00000587170 KMT2CQ8NEZ4 4911 aaKnown RBP11.83□□□□□ -0.52
CXXC1-208ENST00000587170 MDFIC2A0A1B0GVS7 189 aa11.82□□□□□ -0.52
CXXC1-208ENST00000587170 FAM181BA6NEQ2 426 aa11.82□□□□□ -0.52
CXXC1-208ENST00000587170 M0QX08 132 aa11.82□□□□□ -0.52
CXXC1-208ENST00000587170 TGDSO95455 350 aa11.82□□□□□ -0.52
CXXC1-208ENST00000587170 COX5BP10606 129 aa11.82□□□□□ -0.52
CXXC1-208ENST00000587170 GSTM3P21266 225 aa11.82□□□□□ -0.52
CXXC1-208ENST00000587170 LAP3P28838 519 aa11.82□□□□□ -0.52
CXXC1-208ENST00000587170 AQP2P41181 271 aa11.82□□□□□ -0.52
CXXC1-208ENST00000587170 CRYBA2P53672 197 aa11.82□□□□□ -0.52
CXXC1-208ENST00000587170 RAG2P55895 527 aa11.82□□□□□ -0.52
CXXC1-208ENST00000587170 RPL15P61313 204 aaKnown RBP11.82□□□□□ -0.52
CXXC1-208ENST00000587170 PCBD1P61457 104 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms