RNA–Protein interactions for RNA: ENST00000586963.1

CAPNS1-203, Transcript of calpain small subunit 1, humanhuman

TSL 2

Gene CAPNS1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-203ENST00000586963 SGCAQ16586 387 aa6.79□□□□□ -1.32
CAPNS1-203ENST00000586963 VMACQ2NL98 169 aa6.79□□□□□ -1.32
CAPNS1-203ENST00000586963 ZMAT1Q5H9K5 638 aa6.79□□□□□ -1.32
CAPNS1-203ENST00000586963 TMEM255AQ5JRV8 349 aa6.79□□□□□ -1.32
CAPNS1-203ENST00000586963 SPATA46Q5T0L3 261 aa6.79□□□□□ -1.32
CAPNS1-203ENST00000586963 SLC25A47Q6Q0C1 308 aa6.79□□□□□ -1.32
CAPNS1-203ENST00000586963 ARL9Q6T311 187 aa6.79□□□□□ -1.32
CAPNS1-203ENST00000586963 SHISA2Q6UWI4 295 aa6.79□□□□□ -1.32
CAPNS1-203ENST00000586963 RBMS3Q6XE24 437 aaKnown RBP6.79□□□□□ -1.32
CAPNS1-203ENST00000586963 DOK3Q7L591 496 aa6.79□□□□□ -1.32
CAPNS1-203ENST00000586963 ZER1Q7Z7L7 766 aa6.79□□□□□ -1.32
CAPNS1-203ENST00000586963 NKAIN4Q8IVV8 208 aa6.79□□□□□ -1.32
CAPNS1-203ENST00000586963 OR10A6Q8NH74 314 aa6.79□□□□□ -1.32
CAPNS1-203ENST00000586963 AKR7LQ8NHP1 331 aa6.79□□□□□ -1.32
CAPNS1-203ENST00000586963 PFN4Q8NHR9 129 aa6.79□□□□□ -1.32
CAPNS1-203ENST00000586963 TMEM239Q8WW34 195 aa6.79□□□□□ -1.32
CAPNS1-203ENST00000586963 HDAC2Q92769 488 aaKnown RBP6.79□□□□□ -1.32
CAPNS1-203ENST00000586963 LRRC58Q96CX6 371 aa6.79□□□□□ -1.32
CAPNS1-203ENST00000586963 RBP7Q96R05 134 aa6.79□□□□□ -1.32
CAPNS1-203ENST00000586963 GPA33Q99795 319 aa6.79□□□□□ -1.32
CAPNS1-203ENST00000586963 ALG12Q9BV10 488 aa6.79□□□□□ -1.32
CAPNS1-203ENST00000586963 OR2H1Q9GZK4 316 aa6.79□□□□□ -1.32
CAPNS1-203ENST00000586963 OR2J1Q9GZK6 312 aa6.79□□□□□ -1.32
CAPNS1-203ENST00000586963 WNT5BQ9H1J7 359 aa6.79□□□□□ -1.32
CAPNS1-203ENST00000586963 TXNIPQ9H3M7 391 aa6.79□□□□□ -1.32
CAPNS1-203ENST00000586963 ZMAT3Q9HA38 289 aaKnown RBP6.79□□□□□ -1.32
CAPNS1-203ENST00000586963 ELOVL3Q9HB03 270 aa6.79□□□□□ -1.32
CAPNS1-203ENST00000586963 TUBG2Q9NRH3 451 aa6.79□□□□□ -1.32
CAPNS1-203ENST00000586963 ARMCX1Q9P291 453 aa6.79□□□□□ -1.32
CAPNS1-203ENST00000586963 RIMS3Q9UJD0 308 aa6.79□□□□□ -1.32
CAPNS1-203ENST00000586963 BAG5Q9UL15 447 aa6.79□□□□□ -1.32
CAPNS1-203ENST00000586963 TIMM10BQ9Y5J6 103 aa6.79□□□□□ -1.32
CAPNS1-203ENST00000586963 NPTNQ9Y639 398 aa6.79□□□□□ -1.32
CAPNS1-203ENST00000586963 IGKV1D-43A0A0B4J1Z2 117 aa6.78□□□□□ -1.32
CAPNS1-203ENST00000586963 ISPDA4D126 451 aa6.78□□□□□ -1.32
CAPNS1-203ENST00000586963 TMPRSS2O15393 492 aa6.78□□□□□ -1.32
CAPNS1-203ENST00000586963 NGFP01138 241 aa6.78□□□□□ -1.32
CAPNS1-203ENST00000586963 IGHV2-70P01814 119 aa6.78□□□□□ -1.32
CAPNS1-203ENST00000586963 SBK2P0C263 348 aa6.78□□□□□ -1.32
CAPNS1-203ENST00000586963 COX5BP10606 129 aa6.78□□□□□ -1.32
CAPNS1-203ENST00000586963 GUCA1AP43080 201 aaPredicted RBP6.78□□□□□ -1.32
CAPNS1-203ENST00000586963 ARHGDIAP52565 204 aa6.78□□□□□ -1.32
CAPNS1-203ENST00000586963 TAS2R41P59536 307 aa6.78□□□□□ -1.32
CAPNS1-203ENST00000586963 PCBD1P61457 104 aa6.78□□□□□ -1.32
CAPNS1-203ENST00000586963 PPP1CBP62140 327 aa6.78□□□□□ -1.32
CAPNS1-203ENST00000586963 ERVK-25P63136 954 aa6.78□□□□□ -1.32
CAPNS1-203ENST00000586963 CD47Q08722 323 aa6.78□□□□□ -1.32
CAPNS1-203ENST00000586963 CDK5R2Q13319 367 aa6.78□□□□□ -1.32
CAPNS1-203ENST00000586963 TMEM155Q4W5P6 130 aa6.78□□□□□ -1.32
CAPNS1-203ENST00000586963 MTX3Q5HYI7 312 aa6.78□□□□□ -1.32
CAPNS1-203ENST00000586963 FOXL2NBQ6ZUU3 175 aa6.78□□□□□ -1.32
CAPNS1-203ENST00000586963 CPLX4Q7Z7G2 160 aa6.78□□□□□ -1.32
CAPNS1-203ENST00000586963 SYT9Q86SS6 491 aa6.78□□□□□ -1.32
CAPNS1-203ENST00000586963 LRRC28Q86X40 367 aaPredicted RBP6.78□□□□□ -1.32
CAPNS1-203ENST00000586963 SPICQ8N5J4 248 aa6.78□□□□□ -1.32
CAPNS1-203ENST00000586963 POU5F2Q8N7G0 328 aa6.78□□□□□ -1.32
CAPNS1-203ENST00000586963 ZNF283Q8N7M2 679 aa6.78□□□□□ -1.32
CAPNS1-203ENST00000586963 DEFB108BQ8NET1 73 aa6.78□□□□□ -1.32
CAPNS1-203ENST00000586963 MOSPD2Q8NHP6 518 aa6.78□□□□□ -1.32
CAPNS1-203ENST00000586963 ABHD4Q8TB40 342 aa6.78□□□□□ -1.32
CAPNS1-203ENST00000586963 TMEM255BQ8WV15 326 aa6.78□□□□□ -1.32
CAPNS1-203ENST00000586963 C22orf15Q8WYQ4 148 aa6.78□□□□□ -1.32
CAPNS1-203ENST00000586963 NSMAFQ92636 917 aa6.78□□□□□ -1.32
CAPNS1-203ENST00000586963 C4orf45Q96LM5 186 aa6.78□□□□□ -1.32
CAPNS1-203ENST00000586963 SAMD8Q96LT4 415 aa6.78□□□□□ -1.32
CAPNS1-203ENST00000586963 SH3GL1Q99961 368 aa6.78□□□□□ -1.32
CAPNS1-203ENST00000586963 WACQ9BTA9 647 aa6.78□□□□□ -1.32
CAPNS1-203ENST00000586963 PATZ1Q9HBE1 687 aaKnown RBP6.78□□□□□ -1.32
CAPNS1-203ENST00000586963 C20orf141Q9NUB4 165 aa6.78□□□□□ -1.32
CAPNS1-203ENST00000586963 PLEK2Q9NYT0 353 aa6.78□□□□□ -1.32
CAPNS1-203ENST00000586963 UBAP1Q9NZ09 502 aa6.78□□□□□ -1.32
CAPNS1-203ENST00000586963 PURGQ9UJV8 347 aaKnown RBP6.78□□□□□ -1.32
CAPNS1-203ENST00000586963 NUP50Q9UKX7 468 aa6.78□□□□□ -1.32
CAPNS1-203ENST00000586963 HIF3AQ9Y2N7 669 aa6.78□□□□□ -1.32
CAPNS1-203ENST00000586963 SH3GLB1Q9Y371 365 aa6.78□□□□□ -1.32
CAPNS1-203ENST00000586963 MED31Q9Y3C7 131 aa6.78□□□□□ -1.32
CAPNS1-203ENST00000586963 PPIAL4AQ9Y536 164 aa6.78□□□□□ -1.32
CAPNS1-203ENST00000586963 PCDHGB1Q9Y5G3 927 aa6.78□□□□□ -1.32
CAPNS1-203ENST00000586963 AUP1Q9Y679 476 aa6.78□□□□□ -1.32
CAPNS1-203ENST00000586963 CAPN7Q9Y6W3 813 aa6.78□□□□□ -1.32
CAPNS1-203ENST00000586963 POM121CA8CG34 1229 aa6.77□□□□□ -1.33
CAPNS1-203ENST00000586963 A8MXK9 166 aa6.77□□□□□ -1.33
CAPNS1-203ENST00000586963 TRAPPC2LH3BP13 241 aa6.77□□□□□ -1.33
CAPNS1-203ENST00000586963 MRASO14807 208 aa6.77□□□□□ -1.33
CAPNS1-203ENST00000586963 KCNAB3O43448 404 aa6.77□□□□□ -1.33
CAPNS1-203ENST00000586963 SNX3O60493 162 aa6.77□□□□□ -1.33
CAPNS1-203ENST00000586963 CCDC22O60826 627 aa6.77□□□□□ -1.33
CAPNS1-203ENST00000586963 IFNA14P01570 189 aa6.77□□□□□ -1.33
CAPNS1-203ENST00000586963 IGHMP01871 453 aa6.77□□□□□ -1.33
CAPNS1-203ENST00000586963 ZNF12P17014 697 aa6.77□□□□□ -1.33
CAPNS1-203ENST00000586963 TNFRSF1AP19438 455 aa6.77□□□□□ -1.33
CAPNS1-203ENST00000586963 TNFSF4P23510 183 aa6.77□□□□□ -1.33
CAPNS1-203ENST00000586963 CPT2P23786 658 aa6.77□□□□□ -1.33
CAPNS1-203ENST00000586963 LAP3P28838 519 aa6.77□□□□□ -1.33
CAPNS1-203ENST00000586963 SLC6A9P48067 706 aa6.77□□□□□ -1.33
CAPNS1-203ENST00000586963 RPL27P61353 136 aaKnown RBP6.77□□□□□ -1.33
CAPNS1-203ENST00000586963 TNFAIP6P98066 277 aaPredicted RBP6.77□□□□□ -1.33
CAPNS1-203ENST00000586963 FMODQ06828 376 aa6.77□□□□□ -1.33
CAPNS1-203ENST00000586963 PSG7Q13046 419 aa6.77□□□□□ -1.33
CAPNS1-203ENST00000586963 ZNF154Q13106 437 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms