RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 PRSS23O95084 383 aa9.84□□□□□ -0.83
LIG3-207ENST00000586119 SNAP29O95721 258 aa9.84□□□□□ -0.83
LIG3-207ENST00000586119 FSHBP01225 129 aa9.84□□□□□ -0.83
LIG3-207ENST00000586119 IGHG1P01857 330 aa9.84□□□□□ -0.83
LIG3-207ENST00000586119 HSD17B1P14061 328 aa9.84□□□□□ -0.83
LIG3-207ENST00000586119 ACADSP16219 412 aa9.84□□□□□ -0.83
LIG3-207ENST00000586119 FUT4P22083 530 aa9.84□□□□□ -0.83
LIG3-207ENST00000586119 STOMP27105 288 aa9.84□□□□□ -0.83
LIG3-207ENST00000586119 GSK3BP49841 420 aa9.84□□□□□ -0.83
LIG3-207ENST00000586119 UBA52P62987 128 aaKnown RBP9.84□□□□□ -0.83
LIG3-207ENST00000586119 PSG4Q00888 419 aa9.84□□□□□ -0.83
LIG3-207ENST00000586119 PLP2Q04941 152 aa9.84□□□□□ -0.83
LIG3-207ENST00000586119 SGCAQ16586 387 aa9.84□□□□□ -0.83
LIG3-207ENST00000586119 HFEQ30201 348 aa9.84□□□□□ -0.83
LIG3-207ENST00000586119 PCGF3Q3KNV8 242 aa9.84□□□□□ -0.83
LIG3-207ENST00000586119 CCDC121Q6ZUS5 278 aa9.84□□□□□ -0.83
LIG3-207ENST00000586119 SIGLECL1Q8N7X8 197 aa9.84□□□□□ -0.83
LIG3-207ENST00000586119 OR1J2Q8NGS2 313 aa9.84□□□□□ -0.83
LIG3-207ENST00000586119 NANPQ8TBE9 248 aa9.84□□□□□ -0.83
LIG3-207ENST00000586119 RASSF5Q8WWW0 418 aa9.84□□□□□ -0.83
LIG3-207ENST00000586119 DVL3Q92997 716 aaPredicted RBP9.84□□□□□ -0.83
LIG3-207ENST00000586119 NMD3Q96D46 503 aaKnown RBP9.84□□□□□ -0.83
LIG3-207ENST00000586119 RAB39BQ96DA2 213 aa9.84□□□□□ -0.83
LIG3-207ENST00000586119 CDRT15Q96T59 188 aa9.84□□□□□ -0.83
LIG3-207ENST00000586119 KCTD14Q9BQ13 255 aaPredicted RBP9.84□□□□□ -0.83
LIG3-207ENST00000586119 BTBD10Q9BSF8 475 aa9.84□□□□□ -0.83
LIG3-207ENST00000586119 ZNF426Q9BUY5 554 aa9.84□□□□□ -0.83
LIG3-207ENST00000586119 SUCNR1Q9BXA5 334 aa9.84□□□□□ -0.83
LIG3-207ENST00000586119 BCL2L14Q9BZR8 327 aa9.84□□□□□ -0.83
LIG3-207ENST00000586119 OR2J1Q9GZK6 312 aa9.84□□□□□ -0.83
LIG3-207ENST00000586119 SAP30LQ9HAJ7 183 aa9.84□□□□□ -0.83
LIG3-207ENST00000586119 MSL2Q9HCI7 577 aa9.84□□□□□ -0.83
LIG3-207ENST00000586119 CD300AQ9UGN4 299 aa9.84□□□□□ -0.83
LIG3-207ENST00000586119 GPR160Q9UJ42 338 aa9.84□□□□□ -0.83
LIG3-207ENST00000586119 DOCK11Q5JSL3 2073 aa9.84□□□□□ -0.83
LIG3-207ENST00000586119 PKD1L1Q8TDX9 2849 aa9.83□□□□□ -0.84
LIG3-207ENST00000586119 ISPDA4D126 451 aa9.83□□□□□ -0.84
LIG3-207ENST00000586119 C5orf49A4QMS7 147 aa9.83□□□□□ -0.84
LIG3-207ENST00000586119 TRAPPC2LH3BP13 241 aa9.83□□□□□ -0.84
LIG3-207ENST00000586119 TMPRSS2O15393 492 aa9.83□□□□□ -0.84
LIG3-207ENST00000586119 GMNNO75496 209 aa9.83□□□□□ -0.84
LIG3-207ENST00000586119 SCG5P05408 212 aa9.83□□□□□ -0.84
LIG3-207ENST00000586119 APLNRP35414 380 aa9.83□□□□□ -0.84
LIG3-207ENST00000586119 ZNF84P51523 738 aa9.83□□□□□ -0.84
LIG3-207ENST00000586119 ZNF133P52736 654 aaPredicted RBP9.83□□□□□ -0.84
LIG3-207ENST00000586119 SEC61A1P61619 476 aaKnown RBP9.83□□□□□ -0.84
LIG3-207ENST00000586119 ERVK-25P63136 954 aa9.83□□□□□ -0.84
LIG3-207ENST00000586119 TEKQ02763 1124 aa9.83□□□□□ -0.84
LIG3-207ENST00000586119 HSF2Q03933 536 aa9.83□□□□□ -0.84
LIG3-207ENST00000586119 ZNF718Q3SXZ3 478 aa9.83□□□□□ -0.84
LIG3-207ENST00000586119 ARMC4Q5T2S8 1044 aa9.83□□□□□ -0.84
LIG3-207ENST00000586119 SLC25A47Q6Q0C1 308 aa9.83□□□□□ -0.84
LIG3-207ENST00000586119 RFPL4BQ6ZWI9 263 aa9.83□□□□□ -0.84
LIG3-207ENST00000586119 NANOGNBQ7Z5D8 188 aa9.83□□□□□ -0.84
LIG3-207ENST00000586119 JAZF1Q86VZ6 243 aa9.83□□□□□ -0.84
LIG3-207ENST00000586119 BPIFB2Q8N4F0 458 aa9.83□□□□□ -0.84
LIG3-207ENST00000586119 NOXO1Q8NFA2 376 aa9.83□□□□□ -0.84
LIG3-207ENST00000586119 KLF14Q8TD94 323 aaPredicted RBP9.83□□□□□ -0.84
LIG3-207ENST00000586119 TMEM255BQ8WV15 326 aa9.83□□□□□ -0.84
LIG3-207ENST00000586119 RAB1CQ92928 201 aa9.83□□□□□ -0.84
LIG3-207ENST00000586119 SLC7A6OSQ96CW6 309 aaPredicted RBP9.83□□□□□ -0.84
LIG3-207ENST00000586119 C1orf147Q96MC9 270 aaPredicted RBP9.83□□□□□ -0.84
LIG3-207ENST00000586119 ZNF48Q96MX3 618 aaPredicted RBP9.83□□□□□ -0.84
LIG3-207ENST00000586119 SEPHS2Q99611 448 aa9.83□□□□□ -0.84
LIG3-207ENST00000586119 GAL3ST1Q99999 423 aa9.83□□□□□ -0.84
LIG3-207ENST00000586119 WNT5BQ9H1J7 359 aa9.83□□□□□ -0.84
LIG3-207ENST00000586119 LRMDAQ9H2I8 198 aa9.83□□□□□ -0.84
LIG3-207ENST00000586119 MMADHCQ9H3L0 296 aaPredicted RBP9.83□□□□□ -0.84
LIG3-207ENST00000586119 MUC13Q9H3R2 512 aa9.83□□□□□ -0.84
LIG3-207ENST00000586119 POFUT1Q9H488 388 aa9.83□□□□□ -0.84
LIG3-207ENST00000586119 ZNF69Q9UC07 566 aa9.83□□□□□ -0.84
LIG3-207ENST00000586119 EGFL7Q9UHF1 273 aa9.83□□□□□ -0.84
LIG3-207ENST00000586119 KLHL21Q9UJP4 597 aa9.83□□□□□ -0.84
LIG3-207ENST00000586119 A0A1W2PRG6 482 aa9.82□□□□□ -0.84
LIG3-207ENST00000586119 MCIDASD6RGH6 385 aa9.82□□□□□ -0.84
LIG3-207ENST00000586119 GSTA4O15217 222 aa9.82□□□□□ -0.84
LIG3-207ENST00000586119 PIP5K1CO60331 668 aa9.82□□□□□ -0.84
LIG3-207ENST00000586119 OR7A10O76100 309 aa9.82□□□□□ -0.84
LIG3-207ENST00000586119 PTHP01270 115 aa9.82□□□□□ -0.84
LIG3-207ENST00000586119 MT-ND1P03886 318 aa9.82□□□□□ -0.84
LIG3-207ENST00000586119 SBK2P0C263 348 aa9.82□□□□□ -0.84
LIG3-207ENST00000586119 KDELR2P33947 212 aa9.82□□□□□ -0.84
LIG3-207ENST00000586119 LIMS1P48059 325 aa9.82□□□□□ -0.84
LIG3-207ENST00000586119 SCGB2A2Q13296 93 aa9.82□□□□□ -0.84
LIG3-207ENST00000586119 PIN1Q13526 163 aaPredicted RBP9.82□□□□□ -0.84
LIG3-207ENST00000586119 KLF17Q5JT82 389 aaPredicted RBP9.82□□□□□ -0.84
LIG3-207ENST00000586119 C10orf128Q5T292 105 aa9.82□□□□□ -0.84
LIG3-207ENST00000586119 DEFB108BQ8NET1 73 aa9.82□□□□□ -0.84
LIG3-207ENST00000586119 POP5Q969H6 163 aaKnown RBP9.82□□□□□ -0.84
LIG3-207ENST00000586119 ZMYND19Q96E35 227 aaPredicted RBP9.82□□□□□ -0.84
LIG3-207ENST00000586119 ELMOD3Q96FG2 381 aa9.82□□□□□ -0.84
LIG3-207ENST00000586119 TIMD4Q96H15 378 aa9.82□□□□□ -0.84
LIG3-207ENST00000586119 MPP4Q96JB8 637 aa9.82□□□□□ -0.84
LIG3-207ENST00000586119 JMJD8Q96S16 334 aa9.82□□□□□ -0.84
LIG3-207ENST00000586119 ZNF747Q9BV97 191 aa9.82□□□□□ -0.84
LIG3-207ENST00000586119 C1orf198Q9H425 327 aa9.82□□□□□ -0.84
LIG3-207ENST00000586119 SIAEQ9HAT2 523 aa9.82□□□□□ -0.84
LIG3-207ENST00000586119 CCNB1IP1Q9NPC3 277 aa9.82□□□□□ -0.84
LIG3-207ENST00000586119 INIPQ9NRY2 104 aa9.82□□□□□ -0.84
LIG3-207ENST00000586119 MAGEL2Q9UJ55 1249 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms