RNA–Protein interactions for RNA: ENST00000585879.1

RPRD1A-203, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 3

Gene RPRD1A, Length 425 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-203ENST00000585879 RGS9BPQ6ZS82 235 aa2.22□□□□□ -2.05
RPRD1A-203ENST00000585879 LINC00173Q6ZV60 143 aa2.22□□□□□ -2.05
RPRD1A-203ENST00000585879 ABHD12BQ7Z5M8 362 aaPredicted RBP2.22□□□□□ -2.05
RPRD1A-203ENST00000585879 TRIM69Q86WT6 500 aa2.22□□□□□ -2.05
RPRD1A-203ENST00000585879 TPRX1Q8N7U7 411 aa2.22□□□□□ -2.05
RPRD1A-203ENST00000585879 ZNF557Q8N988 423 aaPredicted RBP2.22□□□□□ -2.05
RPRD1A-203ENST00000585879 SDR9C7Q8NEX9 313 aa2.22□□□□□ -2.05
RPRD1A-203ENST00000585879 OR8J1Q8NGP2 316 aa2.22□□□□□ -2.05
RPRD1A-203ENST00000585879 GEMIN6Q8WXD5 167 aaKnown RBP2.22□□□□□ -2.05
RPRD1A-203ENST00000585879 N4BP2L2Q92802 583 aaPredicted RBP2.22□□□□□ -2.05
RPRD1A-203ENST00000585879 C12orf42Q96LP6 360 aa2.22□□□□□ -2.05
RPRD1A-203ENST00000585879 SORT1Q99523 831 aa2.22□□□□□ -2.05
RPRD1A-203ENST00000585879 ROPN1BQ9BZX4 212 aaPredicted RBP2.22□□□□□ -2.05
RPRD1A-203ENST00000585879 SGK2Q9HBY8 427 aa2.22□□□□□ -2.05
RPRD1A-203ENST00000585879 LHX9Q9NQ69 397 aa2.22□□□□□ -2.05
RPRD1A-203ENST00000585879 EXD2Q9NVH0 621 aa2.22□□□□□ -2.05
RPRD1A-203ENST00000585879 NECAP2Q9NVZ3 263 aa2.22□□□□□ -2.05
RPRD1A-203ENST00000585879 F11RQ9Y624 299 aaKnown RBP2.22□□□□□ -2.05
RPRD1A-203ENST00000585879 SCN2AQ99250 2005 aa2.22□□□□□ -2.05
RPRD1A-203ENST00000585879 SLIT3O75094 1523 aa2.22□□□□□ -2.05
RPRD1A-203ENST00000585879 CAMTA1Q9Y6Y1 1673 aa2.22□□□□□ -2.05
RPRD1A-203ENST00000585879 XIRP1Q702N8 1843 aaKnown RBP2.21□□□□□ -2.05
RPRD1A-203ENST00000585879 MYH11P35749 1972 aa2.21□□□□□ -2.05
RPRD1A-203ENST00000585879 ARHGAP21Q5T5U3 1957 aa2.21□□□□□ -2.05
RPRD1A-203ENST00000585879 ASTN1O14525 1302 aa2.21□□□□□ -2.06
RPRD1A-203ENST00000585879 PCDH11XQ9BZA7 1347 aa2.21□□□□□ -2.06
RPRD1A-203ENST00000585879 PXDNQ92626 1479 aa2.21□□□□□ -2.06
RPRD1A-203ENST00000585879 COL18A1P39060 1754 aa2.21□□□□□ -2.06
RPRD1A-203ENST00000585879 KDM3BQ7LBC6 1761 aa2.21□□□□□ -2.06
RPRD1A-203ENST00000585879 STRCQ7RTU9 1775 aa2.21□□□□□ -2.06
RPRD1A-203ENST00000585879 SCN11AQ9UI33 1791 aa2.21□□□□□ -2.06
RPRD1A-203ENST00000585879 MYH7BA7E2Y1 1941 aa2.21□□□□□ -2.06
RPRD1A-203ENST00000585879 MYH4Q9Y623 1939 aa2.21□□□□□ -2.06
RPRD1A-203ENST00000585879 IGLV11-55A0A075B6I3 123 aa2.21□□□□□ -2.06
RPRD1A-203ENST00000585879 IGKV1D-13A0A0B4J2D9 117 aa2.21□□□□□ -2.06
RPRD1A-203ENST00000585879 ERICH2A1L162 156 aa2.21□□□□□ -2.06
RPRD1A-203ENST00000585879 PLAC8L1A1L4L8 177 aa2.21□□□□□ -2.06
RPRD1A-203ENST00000585879 PCP4L1A6NKN8 68 aa2.21□□□□□ -2.06
RPRD1A-203ENST00000585879 KDM6AO15550 1401 aaPredicted RBP2.21□□□□□ -2.06
RPRD1A-203ENST00000585879 B4GALT2O60909 372 aa2.21□□□□□ -2.06
RPRD1A-203ENST00000585879 C1orf105O95561 183 aa2.21□□□□□ -2.06
RPRD1A-203ENST00000585879 IGKV1-13P0DP09 117 aa2.21□□□□□ -2.06
RPRD1A-203ENST00000585879 CD1CP29017 333 aa2.21□□□□□ -2.06
RPRD1A-203ENST00000585879 FDFT1P37268 417 aa2.21□□□□□ -2.06
RPRD1A-203ENST00000585879 YAP1P46937 504 aaKnown RBP2.21□□□□□ -2.06
RPRD1A-203ENST00000585879 ARFIP1P53367 373 aa2.21□□□□□ -2.06
RPRD1A-203ENST00000585879 ACTR1AP61163 376 aa2.21□□□□□ -2.06
RPRD1A-203ENST00000585879 ACTA2P62736 377 aa2.21□□□□□ -2.06
RPRD1A-203ENST00000585879 ACTC1P68032 377 aa2.21□□□□□ -2.06
RPRD1A-203ENST00000585879 MRPS25P82663 173 aaKnown RBP2.21□□□□□ -2.06
RPRD1A-203ENST00000585879 EIF4EBP1Q13541 118 aaPredicted RBP2.21□□□□□ -2.06
RPRD1A-203ENST00000585879 IMMTQ16891 758 aaKnown RBP2.21□□□□□ -2.06
RPRD1A-203ENST00000585879 WHAMMP3Q1A5X7 153 aa2.21□□□□□ -2.06
RPRD1A-203ENST00000585879 TTLL9Q3SXZ7 439 aa2.21□□□□□ -2.06
RPRD1A-203ENST00000585879 ANKDD1AQ495B1 522 aa2.21□□□□□ -2.06
RPRD1A-203ENST00000585879 LRRC23Q53EV4 343 aaPredicted RBP2.21□□□□□ -2.06
RPRD1A-203ENST00000585879 TMEM255AQ5JRV8 349 aa2.21□□□□□ -2.06
RPRD1A-203ENST00000585879 TNS3Q68CZ2 1445 aa2.21□□□□□ -2.06
RPRD1A-203ENST00000585879 LYPD2Q6UXB3 125 aa2.21□□□□□ -2.06
RPRD1A-203ENST00000585879 CCDC73Q6ZRK6 1079 aa2.21□□□□□ -2.06
RPRD1A-203ENST00000585879 C19orf35Q6ZS72 473 aa2.21□□□□□ -2.06
RPRD1A-203ENST00000585879 NCCRP1Q6ZVX7 275 aaPredicted RBP2.21□□□□□ -2.06
RPRD1A-203ENST00000585879 SMIM5Q71RC9 77 aa2.21□□□□□ -2.06
RPRD1A-203ENST00000585879 TGIF2LXQ8IUE1 241 aa2.21□□□□□ -2.06
RPRD1A-203ENST00000585879 PSTKQ8IV42 348 aaKnown RBP2.21□□□□□ -2.06
RPRD1A-203ENST00000585879 PCP2Q8IVA1 136 aa2.21□□□□□ -2.06
RPRD1A-203ENST00000585879 ZNF695Q8IW36 515 aa2.21□□□□□ -2.06
RPRD1A-203ENST00000585879 NECAB1Q8N987 351 aa2.21□□□□□ -2.06
RPRD1A-203ENST00000585879 CCDC148Q8NFR7 591 aa2.21□□□□□ -2.06
RPRD1A-203ENST00000585879 OR1L6Q8NGR2 347 aa2.21□□□□□ -2.06
RPRD1A-203ENST00000585879 OR2L8Q8NGY9 312 aa2.21□□□□□ -2.06
RPRD1A-203ENST00000585879 OR2G2Q8NGZ5 317 aa2.21□□□□□ -2.06
RPRD1A-203ENST00000585879 CD300LFQ8TDQ1 290 aa2.21□□□□□ -2.06
RPRD1A-203ENST00000585879 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.21□□□□□ -2.06
RPRD1A-203ENST00000585879 LRRC58Q96CX6 371 aa2.21□□□□□ -2.06
RPRD1A-203ENST00000585879 AURKBQ96GD4 344 aaPredicted RBP2.21□□□□□ -2.06
RPRD1A-203ENST00000585879 TSNARE1Q96NA8 513 aa2.21□□□□□ -2.06
RPRD1A-203ENST00000585879 ALS2CR12Q96Q35 445 aa2.21□□□□□ -2.06
RPRD1A-203ENST00000585879 RARRES2Q99969 163 aa2.21□□□□□ -2.06
RPRD1A-203ENST00000585879 UPF3BQ9BZI7 483 aaKnown RBP2.21□□□□□ -2.06
RPRD1A-203ENST00000585879 CLSTN2Q9H4D0 955 aa2.21□□□□□ -2.06
RPRD1A-203ENST00000585879 NOX3Q9HBY0 568 aa2.21□□□□□ -2.06
RPRD1A-203ENST00000585879 TM9SF3Q9HD45 589 aa2.21□□□□□ -2.06
RPRD1A-203ENST00000585879 ZNF282Q9UDV7 671 aaPredicted RBP2.21□□□□□ -2.06
RPRD1A-203ENST00000585879 OR12D3Q9UGF7 316 aa2.21□□□□□ -2.06
RPRD1A-203ENST00000585879 TRMT112Q9UI30 125 aaKnown RBP2.21□□□□□ -2.06
RPRD1A-203ENST00000585879 PACSIN2Q9UNF0 486 aaPredicted RBP2.21□□□□□ -2.06
RPRD1A-203ENST00000585879 PEX16Q9Y5Y5 336 aa2.21□□□□□ -2.06
RPRD1A-203ENST00000585879 GMEB1Q9Y692 573 aa2.21□□□□□ -2.06
RPRD1A-203ENST00000585879 AFDNP55196 1824 aaKnown RBP2.21□□□□□ -2.06
RPRD1A-203ENST00000585879 USP54Q70EL1 1684 aa2.21□□□□□ -2.06
RPRD1A-203ENST00000585879 ALS2Q96Q42 1657 aa2.21□□□□□ -2.06
RPRD1A-203ENST00000585879 PHRF1Q9P1Y6 1649 aaKnown RBP2.2□□□□□ -2.06
RPRD1A-203ENST00000585879 UBN2Q6ZU65 1347 aa2.2□□□□□ -2.06
RPRD1A-203ENST00000585879 DDX60Q8IY21 1712 aaKnown RBP2.2□□□□□ -2.06
RPRD1A-203ENST00000585879 ATAD5Q96QE3 1844 aa2.2□□□□□ -2.06
RPRD1A-203ENST00000585879 IGLV4-60A0A075B6I1 120 aa2.2□□□□□ -2.06
RPRD1A-203ENST00000585879 CTAGE15A4D2H0 777 aa2.2□□□□□ -2.06
RPRD1A-203ENST00000585879 ERVV-1B6SEH8 477 aa2.2□□□□□ -2.06
RPRD1A-203ENST00000585879 INS-IGF2F8WCM5 200 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms