RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 PRRG3Q9BZD7 231 aa11.96□□□□□ -0.49
PRKCSH-202ENST00000585540 PLA2G12AQ9BZM1 189 aa11.96□□□□□ -0.49
PRKCSH-202ENST00000585540 SEMA6AQ9H2E6 1030 aa11.96□□□□□ -0.49
PRKCSH-202ENST00000585540 MYOZ1Q9NP98 299 aaPredicted RBP11.96□□□□□ -0.49
PRKCSH-202ENST00000585540 CMAHPQ9Y471 501 aa11.96□□□□□ -0.49
PRKCSH-202ENST00000585540 H7C1C5 153 aa11.95□□□□□ -0.5
PRKCSH-202ENST00000585540 SOX14O95416 240 aa11.95□□□□□ -0.5
PRKCSH-202ENST00000585540 TP53P04637 393 aaPredicted RBP11.95□□□□□ -0.5
PRKCSH-202ENST00000585540 CELA3BP08861 270 aa11.95□□□□□ -0.5
PRKCSH-202ENST00000585540 OSMP13725 252 aa11.95□□□□□ -0.5
PRKCSH-202ENST00000585540 FOSL1P15407 271 aa11.95□□□□□ -0.5
PRKCSH-202ENST00000585540 HIST1H1CP16403 213 aaKnown RBP11.95□□□□□ -0.5
PRKCSH-202ENST00000585540 ZNF3P17036 446 aa11.95□□□□□ -0.5
PRKCSH-202ENST00000585540 ZNF32P17041 273 aa11.95□□□□□ -0.5
PRKCSH-202ENST00000585540 GRK5P34947 590 aa11.95□□□□□ -0.5
PRKCSH-202ENST00000585540 CDKN2AP42771 156 aaKnown RBP11.95□□□□□ -0.5
PRKCSH-202ENST00000585540 PPOXP50336 477 aa11.95□□□□□ -0.5
PRKCSH-202ENST00000585540 ATP5J2P56134 94 aa11.95□□□□□ -0.5
PRKCSH-202ENST00000585540 DSCR9P59020 149 aa11.95□□□□□ -0.5
PRKCSH-202ENST00000585540 SELENOVP59797 346 aa11.95□□□□□ -0.5
PRKCSH-202ENST00000585540 LCN6P62502 163 aa11.95□□□□□ -0.5
PRKCSH-202ENST00000585540 MOGQ16653 247 aa11.95□□□□□ -0.5
PRKCSH-202ENST00000585540 Q5PR19 223 aa11.95□□□□□ -0.5
PRKCSH-202ENST00000585540 PTCHD4Q6ZW05 846 aa11.95□□□□□ -0.5
PRKCSH-202ENST00000585540 ZNF584Q8IVC4 421 aa11.95□□□□□ -0.5
PRKCSH-202ENST00000585540 PARP8Q8N3A8 854 aa11.95□□□□□ -0.5
PRKCSH-202ENST00000585540 SVOPLQ8N434 492 aa11.95□□□□□ -0.5
PRKCSH-202ENST00000585540 LRRC18Q8N456 261 aa11.95□□□□□ -0.5
PRKCSH-202ENST00000585540 DCLRE1CQ96SD1 692 aaKnown RBP11.95□□□□□ -0.5
PRKCSH-202ENST00000585540 PKP2Q99959 881 aa11.95□□□□□ -0.5
PRKCSH-202ENST00000585540 OR2H1Q9GZK4 316 aa11.95□□□□□ -0.5
PRKCSH-202ENST00000585540 NUAK2Q9H093 628 aa11.95□□□□□ -0.5
PRKCSH-202ENST00000585540 PLK3Q9H4B4 646 aa11.95□□□□□ -0.5
PRKCSH-202ENST00000585540 S100A14Q9HCY8 104 aa11.95□□□□□ -0.5
PRKCSH-202ENST00000585540 EIF3KQ9UBQ5 218 aaKnown RBP11.95□□□□□ -0.5
PRKCSH-202ENST00000585540 GPR160Q9UJ42 338 aa11.95□□□□□ -0.5
PRKCSH-202ENST00000585540 ARID1AO14497 2285 aa11.95□□□□□ -0.5
PRKCSH-202ENST00000585540 CSMD2Q7Z408 3487 aa11.95□□□□□ -0.5
PRKCSH-202ENST00000585540 TEX15Q9BXT5 2789 aa11.95□□□□□ -0.5
PRKCSH-202ENST00000585540 IGLV1-36A0A0B4J1U3 117 aa11.94□□□□□ -0.5
PRKCSH-202ENST00000585540 SAC3D1A6NKF1 404 aa11.94□□□□□ -0.5
PRKCSH-202ENST00000585540 CD8AP01732 235 aa11.94□□□□□ -0.5
PRKCSH-202ENST00000585540 HMGN1P05114 100 aa11.94□□□□□ -0.5
PRKCSH-202ENST00000585540 ZNF23P17027 643 aa11.94□□□□□ -0.5
PRKCSH-202ENST00000585540 STOMP27105 288 aa11.94□□□□□ -0.5
PRKCSH-202ENST00000585540 CDAP32320 146 aa11.94□□□□□ -0.5
PRKCSH-202ENST00000585540 GDI2P50395 445 aaKnown RBP11.94□□□□□ -0.5
PRKCSH-202ENST00000585540 SLC25A1P53007 311 aa11.94□□□□□ -0.5
PRKCSH-202ENST00000585540 HGFACQ04756 655 aa11.94□□□□□ -0.5
PRKCSH-202ENST00000585540 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.94□□□□□ -0.5
PRKCSH-202ENST00000585540 ENDOGQ14249 297 aaKnown RBP11.94□□□□□ -0.5
PRKCSH-202ENST00000585540 ADIPOQQ15848 244 aa11.94□□□□□ -0.5
PRKCSH-202ENST00000585540 SWI5Q1ZZU3 235 aa11.94□□□□□ -0.5
PRKCSH-202ENST00000585540 PABPC1L2AQ5JQF8 200 aa11.94□□□□□ -0.5
PRKCSH-202ENST00000585540 CLEC12AQ5QGZ9 265 aa11.94□□□□□ -0.5
PRKCSH-202ENST00000585540 SLC27A4Q6P1M0 643 aa11.94□□□□□ -0.5
PRKCSH-202ENST00000585540 MYPOPQ86VE0 399 aaPredicted RBP11.94□□□□□ -0.5
PRKCSH-202ENST00000585540 ATG16L2Q8NAA4 619 aa11.94□□□□□ -0.5
PRKCSH-202ENST00000585540 NPEPL1Q8NDH3 523 aa11.94□□□□□ -0.5
PRKCSH-202ENST00000585540 OR10H5Q8NGA6 315 aa11.94□□□□□ -0.5
PRKCSH-202ENST00000585540 OR52E2Q8NGJ4 325 aa11.94□□□□□ -0.5
PRKCSH-202ENST00000585540 OR4K13Q8NH42 304 aa11.94□□□□□ -0.5
PRKCSH-202ENST00000585540 FBXO17Q96EF6 278 aa11.94□□□□□ -0.5
PRKCSH-202ENST00000585540 PERPQ96FX8 193 aa11.94□□□□□ -0.5
PRKCSH-202ENST00000585540 MS4A3Q96HJ5 214 aa11.94□□□□□ -0.5
PRKCSH-202ENST00000585540 NMNAT3Q96T66 252 aa11.94□□□□□ -0.5
PRKCSH-202ENST00000585540 ZNF416Q9BWM5 594 aa11.94□□□□□ -0.5
PRKCSH-202ENST00000585540 CACNG6Q9BXT2 260 aa11.94□□□□□ -0.5
PRKCSH-202ENST00000585540 ELOVL3Q9HB03 270 aa11.94□□□□□ -0.5
PRKCSH-202ENST00000585540 CMC2Q9NRP2 79 aa11.94□□□□□ -0.5
PRKCSH-202ENST00000585540 KIF17Q9P2E2 1029 aa11.94□□□□□ -0.5
PRKCSH-202ENST00000585540 CGGBP1Q9UFW8 167 aaPredicted RBP11.94□□□□□ -0.5
PRKCSH-202ENST00000585540 B9D1Q9UPM9 204 aa11.94□□□□□ -0.5
PRKCSH-202ENST00000585540 RIIAD1A6NNX1 92 aa11.93□□□□□ -0.5
PRKCSH-202ENST00000585540 FAM171A2A8MVW0 826 aa11.93□□□□□ -0.5
PRKCSH-202ENST00000585540 H3BN98 237 aa11.93□□□□□ -0.5
PRKCSH-202ENST00000585540 SGCEO43556 437 aa11.93□□□□□ -0.5
PRKCSH-202ENST00000585540 OR4A8P0C604 315 aa11.93□□□□□ -0.5
PRKCSH-202ENST00000585540 GAAP10253 952 aa11.93□□□□□ -0.5
PRKCSH-202ENST00000585540 PAICSP22234 425 aaKnown RBP11.93□□□□□ -0.5
PRKCSH-202ENST00000585540 RGS6P49758 472 aa11.93□□□□□ -0.5
PRKCSH-202ENST00000585540 ESRRGP62508 458 aa11.93□□□□□ -0.5
PRKCSH-202ENST00000585540 ADAM8P78325 824 aa11.93□□□□□ -0.5
PRKCSH-202ENST00000585540 PSG4Q00888 419 aa11.93□□□□□ -0.5
PRKCSH-202ENST00000585540 RAB35Q15286 201 aa11.93□□□□□ -0.5
PRKCSH-202ENST00000585540 KRT80Q6KB66 452 aa11.93□□□□□ -0.5
PRKCSH-202ENST00000585540 RGS7BPQ6MZT1 257 aaPredicted RBP11.93□□□□□ -0.5
PRKCSH-202ENST00000585540 ZDHHC13Q8IUH4 622 aa11.93□□□□□ -0.5
PRKCSH-202ENST00000585540 ICA1LQ8NDH6 482 aa11.93□□□□□ -0.5
PRKCSH-202ENST00000585540 SDR9C7Q8NEX9 313 aa11.93□□□□□ -0.5
PRKCSH-202ENST00000585540 GJC3Q8NFK1 279 aa11.93□□□□□ -0.5
PRKCSH-202ENST00000585540 FGFBP3Q8TAT2 258 aa11.93□□□□□ -0.5
PRKCSH-202ENST00000585540 MRPL24Q96A35 216 aaKnown RBP11.93□□□□□ -0.5
PRKCSH-202ENST00000585540 CENPNQ96H22 339 aaPredicted RBP11.93□□□□□ -0.5
PRKCSH-202ENST00000585540 POM121L2Q96KW2 1035 aa11.93□□□□□ -0.5
PRKCSH-202ENST00000585540 HDHD2Q9H0R4 259 aa11.93□□□□□ -0.5
PRKCSH-202ENST00000585540 GABARAPL1Q9H0R8 117 aa11.93□□□□□ -0.5
PRKCSH-202ENST00000585540 RPRD1BQ9NQG5 326 aaKnown RBP11.93□□□□□ -0.5
PRKCSH-202ENST00000585540 OAZ3Q9UMX2 235 aa11.93□□□□□ -0.5
PRKCSH-202ENST00000585540 COA3Q9Y2R0 106 aaPredicted RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms