RNA–Protein interactions for RNA: ENST00000583732.1

SREBF1-222, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 4

Gene SREBF1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-222	ENST00000583732	TNFAIP6	P98066	277 aa	Predicted RBP	12.81	□□□□□ -0.36
SREBF1-222	ENST00000583732	SLC3A1	Q07837	685 aa		12.81	□□□□□ -0.36
SREBF1-222	ENST00000583732	CYBRD1	Q53TN4	286 aa		12.81	□□□□□ -0.36
SREBF1-222	ENST00000583732	AWAT1	Q58HT5	328 aa		12.81	□□□□□ -0.36
SREBF1-222	ENST00000583732	FAM27B	Q5VT28	67 aa		12.81	□□□□□ -0.36
SREBF1-222	ENST00000583732	ALDH16A1	Q8IZ83	802 aa		12.81	□□□□□ -0.36
SREBF1-222	ENST00000583732	LIPH	Q8WWY8	451 aa		12.81	□□□□□ -0.36
SREBF1-222	ENST00000583732	LRRC58	Q96CX6	371 aa		12.81	□□□□□ -0.36
SREBF1-222	ENST00000583732	RBP7	Q96R05	134 aa		12.81	□□□□□ -0.36
SREBF1-222	ENST00000583732	TMEM120A	Q9BXJ8	343 aa		12.81	□□□□□ -0.36
SREBF1-222	ENST00000583732	EMC7	Q9NPA0	242 aa		12.81	□□□□□ -0.36
SREBF1-222	ENST00000583732	CYSLTR2	Q9NS75	346 aa		12.81	□□□□□ -0.36
SREBF1-222	ENST00000583732	RHCG	Q9UBD6	479 aa		12.81	□□□□□ -0.36
SREBF1-222	ENST00000583732	NPTN	Q9Y639	398 aa		12.81	□□□□□ -0.36
SREBF1-222	ENST00000583732	WNK2	Q9Y3S1	2297 aa		12.81	□□□□□ -0.36
SREBF1-222	ENST00000583732	NPIPB13	A6NJU9	1138 aa		12.8	□□□□□ -0.36
SREBF1-222	ENST00000583732	NPIPB4	C9JG80	1138 aa		12.8	□□□□□ -0.36
SREBF1-222	ENST00000583732	ABHD16A	O95870	558 aa		12.8	□□□□□ -0.36
SREBF1-222	ENST00000583732	IGF2	P01344	180 aa		12.8	□□□□□ -0.36
SREBF1-222	ENST00000583732	FUT4	P22083	530 aa		12.8	□□□□□ -0.36
SREBF1-222	ENST00000583732	ZFP36	P26651	326 aa	Known RBP	12.8	□□□□□ -0.36
SREBF1-222	ENST00000583732	GUCA1A	P43080	201 aa	Predicted RBP	12.8	□□□□□ -0.36
SREBF1-222	ENST00000583732	UBA52	P62987	128 aa	Known RBP	12.8	□□□□□ -0.36
SREBF1-222	ENST00000583732	ENDOG	Q14249	297 aa	Known RBP	12.8	□□□□□ -0.36
SREBF1-222	ENST00000583732	ARMCX4	Q5H9R4	360 aa		12.8	□□□□□ -0.36
SREBF1-222	ENST00000583732	MTX3	Q5HYI7	312 aa		12.8	□□□□□ -0.36
SREBF1-222	ENST00000583732	TREML1	Q86YW5	311 aa		12.8	□□□□□ -0.36
SREBF1-222	ENST00000583732	OR8J3	Q8NGG0	315 aa		12.8	□□□□□ -0.36
SREBF1-222	ENST00000583732	OR51A7	Q8NH64	312 aa		12.8	□□□□□ -0.36
SREBF1-222	ENST00000583732	SGMS2	Q8NHU3	365 aa		12.8	□□□□□ -0.36
SREBF1-222	ENST00000583732	C10orf82	Q8WW14	230 aa		12.8	□□□□□ -0.36
SREBF1-222	ENST00000583732	BPIFA2	Q96DR5	249 aa		12.8	□□□□□ -0.36
SREBF1-222	ENST00000583732	C4orf45	Q96LM5	186 aa		12.8	□□□□□ -0.36
SREBF1-222	ENST00000583732	DUX5	Q96PT3	197 aa		12.8	□□□□□ -0.36
SREBF1-222	ENST00000583732	SH3GL1	Q99961	368 aa		12.8	□□□□□ -0.36
SREBF1-222	ENST00000583732	C1QTNF5	Q9BXJ0	243 aa		12.8	□□□□□ -0.36
SREBF1-222	ENST00000583732	ELOVL3	Q9HB03	270 aa		12.8	□□□□□ -0.36
SREBF1-222	ENST00000583732	ZDHHC8	Q9ULC8	765 aa		12.8	□□□□□ -0.36
SREBF1-222	ENST00000583732	A4GNT	Q9UNA3	340 aa		12.8	□□□□□ -0.36
SREBF1-222	ENST00000583732	PCDHGB1	Q9Y5G3	927 aa		12.8	□□□□□ -0.36
SREBF1-222	ENST00000583732	TIMM10B	Q9Y5J6	103 aa		12.8	□□□□□ -0.36
SREBF1-222	ENST00000583732	FOXH1	O75593	365 aa		12.79	□□□□□ -0.36
SREBF1-222	ENST00000583732	FSHB	P01225	129 aa		12.79	□□□□□ -0.36
SREBF1-222	ENST00000583732	IFNA14	P01570	189 aa		12.79	□□□□□ -0.36
SREBF1-222	ENST00000583732	IGHV2-70	P01814	119 aa		12.79	□□□□□ -0.36
SREBF1-222	ENST00000583732	IGHM	P01871	453 aa		12.79	□□□□□ -0.36
SREBF1-222	ENST00000583732	SCG5	P05408	212 aa		12.79	□□□□□ -0.36
SREBF1-222	ENST00000583732	THRB	P10828	461 aa		12.79	□□□□□ -0.36
SREBF1-222	ENST00000583732	MSR1	P21757	451 aa		12.79	□□□□□ -0.36
SREBF1-222	ENST00000583732	GATA3	P23771	443 aa		12.79	□□□□□ -0.36
SREBF1-222	ENST00000583732	FPR2	P25090	351 aa		12.79	□□□□□ -0.36
SREBF1-222	ENST00000583732	PCBD1	P61457	104 aa		12.79	□□□□□ -0.36
SREBF1-222	ENST00000583732	ST3GAL3	Q11203	375 aa		12.79	□□□□□ -0.36
SREBF1-222	ENST00000583732	PSG7	Q13046	419 aa		12.79	□□□□□ -0.36
SREBF1-222	ENST00000583732	ZMAT1	Q5H9K5	638 aa		12.79	□□□□□ -0.36
SREBF1-222	ENST00000583732	OTP	Q5XKR4	325 aa		12.79	□□□□□ -0.36
SREBF1-222	ENST00000583732	ERICH5	Q6P6B1	374 aa		12.79	□□□□□ -0.36
SREBF1-222	ENST00000583732	NRM	Q8IXM6	262 aa		12.79	□□□□□ -0.36
SREBF1-222	ENST00000583732	SIGLECL1	Q8N7X8	197 aa		12.79	□□□□□ -0.36
SREBF1-222	ENST00000583732	OR13C2	Q8NGS9	318 aa		12.79	□□□□□ -0.36
SREBF1-222	ENST00000583732	PRRC1	Q96M27	445 aa		12.79	□□□□□ -0.36
SREBF1-222	ENST00000583732	ZNF583	Q96ND8	569 aa		12.79	□□□□□ -0.36
SREBF1-222	ENST00000583732	MMP26	Q9NRE1	261 aa		12.79	□□□□□ -0.36
SREBF1-222	ENST00000583732	DDX28	Q9NUL7	540 aa	Known RBP	12.79	□□□□□ -0.36
SREBF1-222	ENST00000583732	CGGBP1	Q9UFW8	167 aa	Predicted RBP	12.79	□□□□□ -0.36
SREBF1-222	ENST00000583732	EGFL7	Q9UHF1	273 aa		12.79	□□□□□ -0.36
SREBF1-222	ENST00000583732	FAM220BP	B1ANY3	271 aa		12.78	□□□□□ -0.36
SREBF1-222	ENST00000583732	HMGB1P1	B2RPK0	211 aa	Predicted RBP	12.78	□□□□□ -0.36
SREBF1-222	ENST00000583732		H3BSA7	217 aa		12.78	□□□□□ -0.36
SREBF1-222	ENST00000583732		J3KTA2	159 aa		12.78	□□□□□ -0.36
SREBF1-222	ENST00000583732	DOK2	O60496	412 aa		12.78	□□□□□ -0.36
SREBF1-222	ENST00000583732	CD55	P08174	381 aa		12.78	□□□□□ -0.36
SREBF1-222	ENST00000583732	ADH4	P08319	380 aa		12.78	□□□□□ -0.36
SREBF1-222	ENST00000583732	KDELR2	P33947	212 aa		12.78	□□□□□ -0.36
SREBF1-222	ENST00000583732	LIPA	P38571	399 aa		12.78	□□□□□ -0.36
SREBF1-222	ENST00000583732	HTR5A	P47898	357 aa		12.78	□□□□□ -0.36
SREBF1-222	ENST00000583732	SEC61A1	P61619	476 aa	Known RBP	12.78	□□□□□ -0.36
SREBF1-222	ENST00000583732	C1orf94	Q6P1W5	598 aa		12.78	□□□□□ -0.36
SREBF1-222	ENST00000583732	FOXL2NB	Q6ZUU3	175 aa		12.78	□□□□□ -0.36
SREBF1-222	ENST00000583732	LRRC75A	Q8NAA5	344 aa		12.78	□□□□□ -0.36
SREBF1-222	ENST00000583732	DEFB108B	Q8NET1	73 aa		12.78	□□□□□ -0.36
SREBF1-222	ENST00000583732	OR2Z1	Q8NG97	314 aa		12.78	□□□□□ -0.36
SREBF1-222	ENST00000583732	DIRC2	Q96SL1	478 aa		12.78	□□□□□ -0.36
SREBF1-222	ENST00000583732	SIKE1	Q9BRV8	207 aa		12.78	□□□□□ -0.36
SREBF1-222	ENST00000583732	POLE4	Q9NR33	117 aa		12.78	□□□□□ -0.36
SREBF1-222	ENST00000583732	TMEM106B	Q9NUM4	274 aa		12.78	□□□□□ -0.36
SREBF1-222	ENST00000583732	GMPR2	Q9P2T1	348 aa	Known RBP	12.78	□□□□□ -0.36
SREBF1-222	ENST00000583732	KLHL21	Q9UJP4	597 aa		12.78	□□□□□ -0.36
SREBF1-222	ENST00000583732	PURG	Q9UJV8	347 aa	Known RBP	12.78	□□□□□ -0.36
SREBF1-222	ENST00000583732	NDRG4	Q9ULP0	352 aa	Known RBP	12.78	□□□□□ -0.36
SREBF1-222	ENST00000583732		A6NIZ1	184 aa		12.77	□□□□□ -0.37
SREBF1-222	ENST00000583732	C12orf71	A8MTZ7	269 aa		12.77	□□□□□ -0.37
SREBF1-222	ENST00000583732	EFCAB9	A8MZ26	197 aa		12.77	□□□□□ -0.37
SREBF1-222	ENST00000583732	GSTM3	P21266	225 aa		12.77	□□□□□ -0.37
SREBF1-222	ENST00000583732	TNFSF4	P23510	183 aa		12.77	□□□□□ -0.37
SREBF1-222	ENST00000583732	IFNA8	P32881	189 aa		12.77	□□□□□ -0.37
SREBF1-222	ENST00000583732	GPR4	P46093	362 aa		12.77	□□□□□ -0.37
SREBF1-222	ENST00000583732	ERF	P50548	548 aa		12.77	□□□□□ -0.37
SREBF1-222	ENST00000583732	RAP1B	P61224	184 aa		12.77	□□□□□ -0.37
SREBF1-222	ENST00000583732	RAP1A	P62834	184 aa		12.77	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms