RNA–Protein interactions for RNA: ENST00000583595.1

SS18-223, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-223ENST00000583595 TAS2R9Q9NYW1 312 aa4.05□□□□□ -1.76
SS18-223ENST00000583595 RCOR3Q9P2K3 495 aaPredicted RBP4.05□□□□□ -1.76
SS18-223ENST00000583595 WARS2Q9UGM6 360 aaKnown RBP4.05□□□□□ -1.76
SS18-223ENST00000583595 PDE10AQ9Y233 779 aa4.05□□□□□ -1.76
SS18-223ENST00000583595 OARD1Q9Y530 152 aa4.05□□□□□ -1.76
SS18-223ENST00000583595 PCDHGB1Q9Y5G3 927 aa4.05□□□□□ -1.76
SS18-223ENST00000583595 SCN4AP35499 1836 aa4.05□□□□□ -1.76
SS18-223ENST00000583595 LMO7Q8WWI1 1683 aa4.04□□□□□ -1.76
SS18-223ENST00000583595 A0A087WW49 117 aa4.04□□□□□ -1.76
SS18-223ENST00000583595 TCRBV3S1A0A5B6 114 aa4.04□□□□□ -1.76
SS18-223ENST00000583595 SMCO3A2RU48 225 aa4.04□□□□□ -1.76
SS18-223ENST00000583595 OR6C70A6NIJ9 312 aa4.04□□□□□ -1.76
SS18-223ENST00000583595 RNF212BA8MTL3 300 aa4.04□□□□□ -1.76
SS18-223ENST00000583595 HACD1B0YJ81 288 aa4.04□□□□□ -1.76
SS18-223ENST00000583595 ERVV-1B6SEH8 477 aa4.04□□□□□ -1.76
SS18-223ENST00000583595 TRIM49D1C9J1S8 452 aa4.04□□□□□ -1.76
SS18-223ENST00000583595 KRBOX1C9JBD0 128 aa4.04□□□□□ -1.76
SS18-223ENST00000583595 PRKAB2O43741 272 aa4.04□□□□□ -1.76
SS18-223ENST00000583595 EIF1BO60739 113 aaKnown RBP4.04□□□□□ -1.76
SS18-223ENST00000583595 RAMP3O60896 148 aa4.04□□□□□ -1.76
SS18-223ENST00000583595 NDUFS6O75380 124 aaKnown RBP4.04□□□□□ -1.76
SS18-223ENST00000583595 CCNB2O95067 398 aa4.04□□□□□ -1.76
SS18-223ENST00000583595 NXPH4O95158 308 aa4.04□□□□□ -1.76
SS18-223ENST00000583595 HPP00738 406 aa4.04□□□□□ -1.76
SS18-223ENST00000583595 BPGMP07738 259 aa4.04□□□□□ -1.76
SS18-223ENST00000583595 WNT2P09544 360 aa4.04□□□□□ -1.76
SS18-223ENST00000583595 CT62P0C5K7 136 aa4.04□□□□□ -1.76
SS18-223ENST00000583595 SMIM6P0DI80 62 aa4.04□□□□□ -1.76
SS18-223ENST00000583595 ZNF250P15622 560 aa4.04□□□□□ -1.76
SS18-223ENST00000583595 GSTM3P21266 225 aa4.04□□□□□ -1.76
SS18-223ENST00000583595 CD1BP29016 333 aa4.04□□□□□ -1.76
SS18-223ENST00000583595 PDHA2P29803 388 aa4.04□□□□□ -1.76
SS18-223ENST00000583595 EPHX2P34913 555 aa4.04□□□□□ -1.76
SS18-223ENST00000583595 EIF1P41567 113 aaKnown RBP4.04□□□□□ -1.76
SS18-223ENST00000583595 QARSP47897 775 aaKnown RBP4.04□□□□□ -1.76
SS18-223ENST00000583595 ACOT2P49753 483 aa4.04□□□□□ -1.76
SS18-223ENST00000583595 CRYBB1P53674 252 aaPredicted RBP4.04□□□□□ -1.76
SS18-223ENST00000583595 SPCS3P61009 180 aa4.04□□□□□ -1.76
SS18-223ENST00000583595 PUDPQ08623 228 aa4.04□□□□□ -1.76
SS18-223ENST00000583595 FADDQ13158 208 aa4.04□□□□□ -1.76
SS18-223ENST00000583595 MAB21L1Q13394 359 aa4.04□□□□□ -1.76
SS18-223ENST00000583595 BTN1A1Q13410 526 aa4.04□□□□□ -1.76
SS18-223ENST00000583595 COTL1Q14019 142 aa4.04□□□□□ -1.76
SS18-223ENST00000583595 CAPRIN1Q14444 709 aaKnown RBP4.04□□□□□ -1.76
SS18-223ENST00000583595 LAGE3Q14657 143 aa4.04□□□□□ -1.76
SS18-223ENST00000583595 KLHL12Q53G59 568 aa4.04□□□□□ -1.76
SS18-223ENST00000583595 LGSNQ5TDP6 509 aa4.04□□□□□ -1.76
SS18-223ENST00000583595 XAF1Q6GPH4 301 aa4.04□□□□□ -1.76
SS18-223ENST00000583595 ELP2Q6IA86 826 aa4.04□□□□□ -1.76
SS18-223ENST00000583595 SLC8B1Q6J4K2 584 aa4.04□□□□□ -1.76
SS18-223ENST00000583595 FAM53AQ6NSI3 398 aaPredicted RBP4.04□□□□□ -1.76
SS18-223ENST00000583595 C3orf33Q6P1S2 294 aa4.04□□□□□ -1.76
SS18-223ENST00000583595 SPSB3Q6PJ21 355 aa4.04□□□□□ -1.76
SS18-223ENST00000583595 PAGE2Q7Z2X7 111 aa4.04□□□□□ -1.76
SS18-223ENST00000583595 SNX20Q7Z614 316 aa4.04□□□□□ -1.76
SS18-223ENST00000583595 RNF130Q86XS8 419 aa4.04□□□□□ -1.76
SS18-223ENST00000583595 SLC35F2Q8IXU6 374 aa4.04□□□□□ -1.76
SS18-223ENST00000583595 RAB42Q8N4Z0 105 aa4.04□□□□□ -1.76
SS18-223ENST00000583595 OR2T33Q8NG76 320 aa4.04□□□□□ -1.76
SS18-223ENST00000583595 MCFD2Q8NI22 146 aa4.04□□□□□ -1.76
SS18-223ENST00000583595 DCAKDQ8WVC6 231 aa4.04□□□□□ -1.76
SS18-223ENST00000583595 GTF3AQ92664 365 aaKnown RBP4.04□□□□□ -1.76
SS18-223ENST00000583595 RBPMSQ93062 196 aaKnown RBP4.04□□□□□ -1.76
SS18-223ENST00000583595 UBE2E3Q969T4 207 aa4.04□□□□□ -1.76
SS18-223ENST00000583595 NABP1Q96AH0 204 aa4.04□□□□□ -1.76
SS18-223ENST00000583595 ASB9Q96DX5 294 aa4.04□□□□□ -1.76
SS18-223ENST00000583595 PPP3R2Q96LZ3 170 aa4.04□□□□□ -1.76
SS18-223ENST00000583595 OR52B2Q96RD2 323 aa4.04□□□□□ -1.76
SS18-223ENST00000583595 C19orf43Q9BQ61 176 aa4.04□□□□□ -1.76
SS18-223ENST00000583595 MND1Q9BWT6 205 aa4.04□□□□□ -1.76
SS18-223ENST00000583595 OR51M1Q9H341 326 aa4.04□□□□□ -1.76
SS18-223ENST00000583595 ANKRD19PQ9H560 264 aa4.04□□□□□ -1.76
SS18-223ENST00000583595 XKR8Q9H6D3 395 aa4.04□□□□□ -1.76
SS18-223ENST00000583595 POPDC2Q9HBU9 364 aa4.04□□□□□ -1.76
SS18-223ENST00000583595 SPHK2Q9NRA0 654 aa4.04□□□□□ -1.76
SS18-223ENST00000583595 MED9Q9NWA0 146 aa4.04□□□□□ -1.76
SS18-223ENST00000583595 CMTM6Q9NX76 183 aa4.04□□□□□ -1.76
SS18-223ENST00000583595 FBXL12Q9NXK8 326 aa4.04□□□□□ -1.76
SS18-223ENST00000583595 WWOXQ9NZC7 414 aa4.04□□□□□ -1.76
SS18-223ENST00000583595 BFARQ9NZS9 450 aa4.04□□□□□ -1.76
SS18-223ENST00000583595 ABCD2Q9UBJ2 740 aa4.04□□□□□ -1.76
SS18-223ENST00000583595 BAIAP2Q9UQB8 552 aa4.04□□□□□ -1.76
SS18-223ENST00000583595 SCML2Q9UQR0 700 aa4.04□□□□□ -1.76
SS18-223ENST00000583595 RASD1Q9Y272 281 aa4.04□□□□□ -1.76
SS18-223ENST00000583595 TRAPPC4Q9Y296 219 aa4.04□□□□□ -1.76
SS18-223ENST00000583595 AK6Q9Y3D8 172 aaKnown RBP4.04□□□□□ -1.76
SS18-223ENST00000583595 TNS2Q63HR2 1409 aa4.04□□□□□ -1.76
SS18-223ENST00000583595 CHD4Q14839 1912 aa4.03□□□□□ -1.76
SS18-223ENST00000583595 WDR81Q562E7 1941 aa4.03□□□□□ -1.76
SS18-223ENST00000583595 MEIOCA2RUB1 952 aa4.03□□□□□ -1.76
SS18-223ENST00000583595 ZNF99A8MXY4 864 aaPredicted RBP4.03□□□□□ -1.76
SS18-223ENST00000583595 F5H6K3 240 aa4.03□□□□□ -1.76
SS18-223ENST00000583595 K7EQD1 137 aa4.03□□□□□ -1.76
SS18-223ENST00000583595 WWP2O00308 870 aa4.03□□□□□ -1.76
SS18-223ENST00000583595 CHMP2AO43633 222 aa4.03□□□□□ -1.76
SS18-223ENST00000583595 FGF17O60258 216 aa4.03□□□□□ -1.76
SS18-223ENST00000583595 CRTAPO75718 401 aaPredicted RBP4.03□□□□□ -1.76
SS18-223ENST00000583595 RBBP9O75884 186 aa4.03□□□□□ -1.76
SS18-223ENST00000583595 CLDN9O95484 217 aa4.03□□□□□ -1.76
SS18-223ENST00000583595 TDP2O95551 362 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms