RNA–Protein interactions for RNA: ENST00000583080.1

SREBF1-221, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-221ENST00000583080 POM121CA8CG34 1229 aa13.58□□□□□ -0.24
SREBF1-221ENST00000583080 TIMM8AO60220 97 aaPredicted RBP13.58□□□□□ -0.24
SREBF1-221ENST00000583080 ICMTO60725 284 aa13.58□□□□□ -0.24
SREBF1-221ENST00000583080 OR7A10O76100 309 aa13.58□□□□□ -0.24
SREBF1-221ENST00000583080 GPANK1O95872 356 aa13.58□□□□□ -0.24
SREBF1-221ENST00000583080 FUT1P19526 365 aa13.58□□□□□ -0.24
SREBF1-221ENST00000583080 LAP3P28838 519 aa13.58□□□□□ -0.24
SREBF1-221ENST00000583080 LIPAP38571 399 aa13.58□□□□□ -0.24
SREBF1-221ENST00000583080 IDH3AP50213 366 aa13.58□□□□□ -0.24
SREBF1-221ENST00000583080 CRYBA2P53672 197 aa13.58□□□□□ -0.24
SREBF1-221ENST00000583080 MAGOHP61326 146 aaKnown RBP13.58□□□□□ -0.24
SREBF1-221ENST00000583080 BTG1P62324 171 aa13.58□□□□□ -0.24
SREBF1-221ENST00000583080 SRSF4Q08170 494 aaKnown RBP13.58□□□□□ -0.24
SREBF1-221ENST00000583080 CD47Q08722 323 aa13.58□□□□□ -0.24
SREBF1-221ENST00000583080 PSG7Q13046 419 aa13.58□□□□□ -0.24
SREBF1-221ENST00000583080 CDK5R2Q13319 367 aa13.58□□□□□ -0.24
SREBF1-221ENST00000583080 TMEM155Q4W5P6 130 aa13.58□□□□□ -0.24
SREBF1-221ENST00000583080 ZMAT1Q5H9K5 638 aa13.58□□□□□ -0.24
SREBF1-221ENST00000583080 ZNF774Q6NX45 483 aa13.58□□□□□ -0.24
SREBF1-221ENST00000583080 SLC25A47Q6Q0C1 308 aa13.58□□□□□ -0.24
SREBF1-221ENST00000583080 Q6ZR03 302 aa13.58□□□□□ -0.24
SREBF1-221ENST00000583080 HDDC2Q7Z4H3 204 aa13.58□□□□□ -0.24
SREBF1-221ENST00000583080 NKAIN4Q8IVV8 208 aa13.58□□□□□ -0.24
SREBF1-221ENST00000583080 PARP8Q8N3A8 854 aa13.58□□□□□ -0.24
SREBF1-221ENST00000583080 ZNF283Q8N7M2 679 aa13.58□□□□□ -0.24
SREBF1-221ENST00000583080 TMEM255BQ8WV15 326 aa13.58□□□□□ -0.24
SREBF1-221ENST00000583080 DIRC2Q96SL1 478 aa13.58□□□□□ -0.24
SREBF1-221ENST00000583080 MS4A7Q9GZW8 240 aaPredicted RBP13.58□□□□□ -0.24
SREBF1-221ENST00000583080 SLITRK2Q9H156 845 aa13.58□□□□□ -0.24
SREBF1-221ENST00000583080 NANOGQ9H9S0 305 aa13.58□□□□□ -0.24
SREBF1-221ENST00000583080 SMURF2Q9HAU4 748 aa13.58□□□□□ -0.24
SREBF1-221ENST00000583080 NKIRAS1Q9NYS0 192 aa13.58□□□□□ -0.24
SREBF1-221ENST00000583080 A0A0G2JK05 382 aa13.57□□□□□ -0.24
SREBF1-221ENST00000583080 H3BSA7 217 aa13.57□□□□□ -0.24
SREBF1-221ENST00000583080 MT-ND1P03886 318 aa13.57□□□□□ -0.24
SREBF1-221ENST00000583080 CD80P33681 288 aa13.57□□□□□ -0.24
SREBF1-221ENST00000583080 SLC18A1P54219 525 aa13.57□□□□□ -0.24
SREBF1-221ENST00000583080 PAX8Q06710 450 aa13.57□□□□□ -0.24
SREBF1-221ENST00000583080 TOP3AQ13472 1001 aaPredicted RBP13.57□□□□□ -0.24
SREBF1-221ENST00000583080 TAF11Q15544 211 aa13.57□□□□□ -0.24
SREBF1-221ENST00000583080 FAM27BQ5VT28 67 aa13.57□□□□□ -0.24
SREBF1-221ENST00000583080 UNQ6126/PRO20091Q6UXV3 157 aa13.57□□□□□ -0.24
SREBF1-221ENST00000583080 SPATC1Q76KD6 591 aa13.57□□□□□ -0.24
SREBF1-221ENST00000583080 DHDDSQ86SQ9 333 aa13.57□□□□□ -0.24
SREBF1-221ENST00000583080 LRRC28Q86X40 367 aaPredicted RBP13.57□□□□□ -0.24
SREBF1-221ENST00000583080 ITLN1Q8WWA0 313 aa13.57□□□□□ -0.24
SREBF1-221ENST00000583080 SGTBQ96EQ0 304 aa13.57□□□□□ -0.24
SREBF1-221ENST00000583080 OR5V1Q9UGF6 321 aa13.57□□□□□ -0.24
SREBF1-221ENST00000583080 WNK1Q9H4A3 2382 aa13.57□□□□□ -0.24
SREBF1-221ENST00000583080 TRAV40A0A0B4J280 105 aa13.56□□□□□ -0.24
SREBF1-221ENST00000583080 CEACAM18A8MTB9 384 aa13.56□□□□□ -0.24
SREBF1-221ENST00000583080 TNFRSF1BP20333 461 aa13.56□□□□□ -0.24
SREBF1-221ENST00000583080 PCGF2P35227 344 aa13.56□□□□□ -0.24
SREBF1-221ENST00000583080 ERFP50548 548 aa13.56□□□□□ -0.24
SREBF1-221ENST00000583080 PAX2Q02962 417 aa13.56□□□□□ -0.24
SREBF1-221ENST00000583080 ESCO2Q56NI9 601 aa13.56□□□□□ -0.24
SREBF1-221ENST00000583080 CROCCP2Q86T23 111 aa13.56□□□□□ -0.24
SREBF1-221ENST00000583080 OR2Z1Q8NG97 314 aa13.56□□□□□ -0.24
SREBF1-221ENST00000583080 OR52E2Q8NGJ4 325 aa13.56□□□□□ -0.24
SREBF1-221ENST00000583080 TMIGD2Q96BF3 282 aa13.56□□□□□ -0.24
SREBF1-221ENST00000583080 C4orf45Q96LM5 186 aa13.56□□□□□ -0.24
SREBF1-221ENST00000583080 PIP5K1CO60331 668 aa13.55□□□□□ -0.24
SREBF1-221ENST00000583080 SHOX2O60902 331 aaPredicted RBP13.55□□□□□ -0.24
SREBF1-221ENST00000583080 PLATP00750 562 aa13.55□□□□□ -0.24
SREBF1-221ENST00000583080 CST2P09228 141 aa13.55□□□□□ -0.24
SREBF1-221ENST00000583080 TSPAN19P0C672 248 aa13.55□□□□□ -0.24
SREBF1-221ENST00000583080 MDH2P40926 338 aaKnown RBP13.55□□□□□ -0.24
SREBF1-221ENST00000583080 MMP16P51512 607 aa13.55□□□□□ -0.24
SREBF1-221ENST00000583080 ARHGDIAP52565 204 aa13.55□□□□□ -0.24
SREBF1-221ENST00000583080 ENDOGQ14249 297 aaKnown RBP13.55□□□□□ -0.24
SREBF1-221ENST00000583080 LAPTM4AQ15012 233 aa13.55□□□□□ -0.24
SREBF1-221ENST00000583080 C9orf139Q6ZV77 190 aa13.55□□□□□ -0.24
SREBF1-221ENST00000583080 PATL1Q86TB9 770 aaKnown RBP13.55□□□□□ -0.24
SREBF1-221ENST00000583080 WFDC12Q8WWY7 111 aa13.55□□□□□ -0.24
SREBF1-221ENST00000583080 TLCD1Q96CP7 247 aa13.55□□□□□ -0.24
SREBF1-221ENST00000583080 SAMD8Q96LT4 415 aa13.55□□□□□ -0.24
SREBF1-221ENST00000583080 C7orf26Q96N11 449 aa13.55□□□□□ -0.24
SREBF1-221ENST00000583080 CGREF1Q99674 301 aa13.55□□□□□ -0.24
SREBF1-221ENST00000583080 CCDC28BQ9BUN5 200 aa13.55□□□□□ -0.24
SREBF1-221ENST00000583080 TXNIPQ9H3M7 391 aa13.55□□□□□ -0.24
SREBF1-221ENST00000583080 ELOVL3Q9HB03 270 aa13.55□□□□□ -0.24
SREBF1-221ENST00000583080 PDP1Q9P0J1 537 aaPredicted RBP13.55□□□□□ -0.24
SREBF1-221ENST00000583080 STX18Q9P2W9 335 aaKnown RBP13.55□□□□□ -0.24
SREBF1-221ENST00000583080 A0A1W2PPL8 197 aa13.54□□□□□ -0.24
SREBF1-221ENST00000583080 NPIPB13A6NJU9 1138 aa13.54□□□□□ -0.24
SREBF1-221ENST00000583080 NPIPB4C9JG80 1138 aa13.54□□□□□ -0.24
SREBF1-221ENST00000583080 ZNF205O95201 554 aa13.54□□□□□ -0.24
SREBF1-221ENST00000583080 TGDSO95455 350 aa13.54□□□□□ -0.24
SREBF1-221ENST00000583080 ABHD16AO95870 558 aa13.54□□□□□ -0.24
SREBF1-221ENST00000583080 SCG5P05408 212 aa13.54□□□□□ -0.24
SREBF1-221ENST00000583080 TNFRSF1AP19438 455 aa13.54□□□□□ -0.24
SREBF1-221ENST00000583080 RBM34P42696 430 aaKnown RBP13.54□□□□□ -0.24
SREBF1-221ENST00000583080 MTNR1AP48039 350 aa13.54□□□□□ -0.24
SREBF1-221ENST00000583080 TAS2R41P59536 307 aa13.54□□□□□ -0.24
SREBF1-221ENST00000583080 FOXL2NBQ6ZUU3 175 aa13.54□□□□□ -0.24
SREBF1-221ENST00000583080 C1orf174Q8IYL3 243 aa13.54□□□□□ -0.24
SREBF1-221ENST00000583080 ALDH16A1Q8IZ83 802 aa13.54□□□□□ -0.24
SREBF1-221ENST00000583080 SLC26A7Q8TE54 656 aa13.54□□□□□ -0.24
SREBF1-221ENST00000583080 TMEM239Q8WW34 195 aa13.54□□□□□ -0.24
SREBF1-221ENST00000583080 DACT3Q96B18 629 aaPredicted RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms