RNA–Protein interactions for RNA: ENST00000582448.5

SS18-221, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-221ENST00000582448 NPIPB7O75200 414 aa9.07□□□□□ -0.96
SS18-221ENST00000582448 BGLAPP02818 100 aa9.07□□□□□ -0.96
SS18-221ENST00000582448 TSPAN19P0C672 248 aa9.07□□□□□ -0.96
SS18-221ENST00000582448 HIST1H1CP16403 213 aaKnown RBP9.07□□□□□ -0.96
SS18-221ENST00000582448 AHCYP23526 432 aa9.07□□□□□ -0.96
SS18-221ENST00000582448 DPP4P27487 766 aa9.07□□□□□ -0.96
SS18-221ENST00000582448 GRPRP30550 384 aa9.07□□□□□ -0.96
SS18-221ENST00000582448 SDHAP31040 664 aa9.07□□□□□ -0.96
SS18-221ENST00000582448 PTGDSP41222 190 aa9.07□□□□□ -0.96
SS18-221ENST00000582448 DNASE1L1P49184 302 aa9.07□□□□□ -0.96
SS18-221ENST00000582448 RPL18Q07020 188 aaKnown RBP9.07□□□□□ -0.96
SS18-221ENST00000582448 SELENBP1Q13228 472 aa9.07□□□□□ -0.96
SS18-221ENST00000582448 DEFB113Q30KQ7 82 aa9.07□□□□□ -0.96
SS18-221ENST00000582448 PLPPR5Q32ZL2 321 aa9.07□□□□□ -0.96
SS18-221ENST00000582448 SLC35D3Q5M8T2 416 aa9.07□□□□□ -0.96
SS18-221ENST00000582448 CD276Q5ZPR3 534 aa9.07□□□□□ -0.96
SS18-221ENST00000582448 ADCK1Q86TW2 530 aa9.07□□□□□ -0.96
SS18-221ENST00000582448 FAM109AQ8N4B1 249 aa9.07□□□□□ -0.96
SS18-221ENST00000582448 NANOGP1Q8N7R0 232 aa9.07□□□□□ -0.96
SS18-221ENST00000582448 FADS6Q8N9I5 356 aa9.07□□□□□ -0.96
SS18-221ENST00000582448 SCAIQ8N9R8 606 aa9.07□□□□□ -0.96
SS18-221ENST00000582448 POMGNT2Q8NAT1 580 aa9.07□□□□□ -0.96
SS18-221ENST00000582448 ATP6V1C2Q8NEY4 427 aa9.07□□□□□ -0.96
SS18-221ENST00000582448 OR51G2Q8NGK0 314 aa9.07□□□□□ -0.96
SS18-221ENST00000582448 MOSPD2Q8NHP6 518 aa9.07□□□□□ -0.96
SS18-221ENST00000582448 TMEM41AQ96HV5 264 aa9.07□□□□□ -0.96
SS18-221ENST00000582448 C18orf12Q96KH6 178 aa9.07□□□□□ -0.96
SS18-221ENST00000582448 MOGAT1Q96PD6 335 aa9.07□□□□□ -0.96
SS18-221ENST00000582448 FAM173AQ9BQD7 235 aa9.07□□□□□ -0.96
SS18-221ENST00000582448 ZDHHC11Q9H8X9 412 aa9.07□□□□□ -0.96
SS18-221ENST00000582448 MRPL39Q9NYK5 338 aaKnown RBP9.07□□□□□ -0.96
SS18-221ENST00000582448 EXOGQ9Y2C4 368 aaKnown RBP9.07□□□□□ -0.96
SS18-221ENST00000582448 ABCA2Q9BZC7 2435 aa9.07□□□□□ -0.96
SS18-221ENST00000582448 ACANP16112 2415 aa9.06□□□□□ -0.96
SS18-221ENST00000582448 NIPBLQ6KC79 2804 aaeCLIP9.06□□□□□ -0.96
SS18-221ENST00000582448 TRGV5A0A0B4J1U4 118 aa9.06□□□□□ -0.96
SS18-221ENST00000582448 TEX13CA0A0J9YWL9 993 aa9.06□□□□□ -0.96
SS18-221ENST00000582448 DAPL1A0PJW8 107 aa9.06□□□□□ -0.96
SS18-221ENST00000582448 CCRL2O00421 344 aa9.06□□□□□ -0.96
SS18-221ENST00000582448 AIREO43918 545 aa9.06□□□□□ -0.96
SS18-221ENST00000582448 WDR1O75083 606 aa9.06□□□□□ -0.96
SS18-221ENST00000582448 TXNDC12O95881 172 aa9.06□□□□□ -0.96
SS18-221ENST00000582448 PTHP01270 115 aa9.06□□□□□ -0.96
SS18-221ENST00000582448 RAF1P04049 648 aa9.06□□□□□ -0.96
SS18-221ENST00000582448 AMY2AP04746 511 aa9.06□□□□□ -0.96
SS18-221ENST00000582448 CCL3P10147 92 aa9.06□□□□□ -0.96
SS18-221ENST00000582448 AMY2BP19961 511 aa9.06□□□□□ -0.96
SS18-221ENST00000582448 BMP5P22003 454 aa9.06□□□□□ -0.96
SS18-221ENST00000582448 SERPINB10P48595 397 aa9.06□□□□□ -0.96
SS18-221ENST00000582448 CENPAP49450 140 aa9.06□□□□□ -0.96
SS18-221ENST00000582448 DAP3P51398 398 aaKnown RBP9.06□□□□□ -0.96
SS18-221ENST00000582448 WNT4P56705 351 aa9.06□□□□□ -0.96
SS18-221ENST00000582448 FHL1Q13642 323 aa9.06□□□□□ -0.96
SS18-221ENST00000582448 TOMM20Q15388 145 aa9.06□□□□□ -0.96
SS18-221ENST00000582448 OR7A5Q15622 319 aa9.06□□□□□ -0.96
SS18-221ENST00000582448 GLYR1Q49A26 553 aaPredicted RBP9.06□□□□□ -0.96
SS18-221ENST00000582448 LCE5AQ5TCM9 118 aa9.06□□□□□ -0.96
SS18-221ENST00000582448 RAET1LQ5VY80 246 aa9.06□□□□□ -0.96
SS18-221ENST00000582448 TIGD3Q6B0B8 471 aa9.06□□□□□ -0.96
SS18-221ENST00000582448 LEG1Q6P5S2 330 aa9.06□□□□□ -0.96
SS18-221ENST00000582448 PAMR1Q6UXH9 720 aa9.06□□□□□ -0.96
SS18-221ENST00000582448 H1FNTQ75WM6 255 aaPredicted RBP9.06□□□□□ -0.96
SS18-221ENST00000582448 ACBD7Q8N6N7 88 aa9.06□□□□□ -0.96
SS18-221ENST00000582448 WDSUB1Q8N9V3 476 aa9.06□□□□□ -0.96
SS18-221ENST00000582448 CYB561A3Q8NBI2 242 aa9.06□□□□□ -0.96
SS18-221ENST00000582448 SDR9C7Q8NEX9 313 aa9.06□□□□□ -0.96
SS18-221ENST00000582448 BBS1Q8NFJ9 593 aa9.06□□□□□ -0.96
SS18-221ENST00000582448 OR2T4Q8NH00 348 aa9.06□□□□□ -0.96
SS18-221ENST00000582448 SARAFQ96BY9 339 aa9.06□□□□□ -0.96
SS18-221ENST00000582448 YIPF6Q96EC8 236 aa9.06□□□□□ -0.96
SS18-221ENST00000582448 LRRC46Q96FV0 321 aa9.06□□□□□ -0.96
SS18-221ENST00000582448 CNN2Q99439 309 aaKnown RBP9.06□□□□□ -0.96
SS18-221ENST00000582448 TEAD3Q99594 435 aa9.06□□□□□ -0.96
SS18-221ENST00000582448 DOK1Q99704 481 aa9.06□□□□□ -0.96
SS18-221ENST00000582448 OR11A1Q9GZK7 315 aa9.06□□□□□ -0.96
SS18-221ENST00000582448 MED20Q9H944 212 aa9.06□□□□□ -0.96
SS18-221ENST00000582448 ISYNA1Q9NPH2 558 aa9.06□□□□□ -0.96
SS18-221ENST00000582448 HAO2Q9NYQ3 351 aa9.06□□□□□ -0.96
SS18-221ENST00000582448 B4GALT7Q9UBV7 327 aa9.06□□□□□ -0.96
SS18-221ENST00000582448 BOKQ9UMX3 212 aaPredicted RBP9.06□□□□□ -0.96
SS18-221ENST00000582448 MOKQ9UQ07 419 aa9.06□□□□□ -0.96
SS18-221ENST00000582448 ADAM18Q9Y3Q7 739 aa9.06□□□□□ -0.96
SS18-221ENST00000582448 ZNF407Q9C0G0 2248 aa9.06□□□□□ -0.96
SS18-221ENST00000582448 ANKHD1Q8IWZ3 2542 aaKnown RBP9.06□□□□□ -0.96
SS18-221ENST00000582448 PHF3Q92576 2039 aaKnown RBP9.05□□□□□ -0.96
SS18-221ENST00000582448 A0A1B0GVC2 190 aa9.05□□□□□ -0.96
SS18-221ENST00000582448 C9orf118A6NHY6 69 aa9.05□□□□□ -0.96
SS18-221ENST00000582448 A6NIZ1 184 aa9.05□□□□□ -0.96
SS18-221ENST00000582448 C11orf98E9PRG8 122 aa9.05□□□□□ -0.96
SS18-221ENST00000582448 H3BML4 177 aa9.05□□□□□ -0.96
SS18-221ENST00000582448 PLPP3O14495 311 aa9.05□□□□□ -0.96
SS18-221ENST00000582448 SEC14L5O43304 696 aa9.05□□□□□ -0.96
SS18-221ENST00000582448 AKAP8O43823 692 aaKnown RBP9.05□□□□□ -0.96
SS18-221ENST00000582448 GLSO94925 669 aaPredicted RBP9.05□□□□□ -0.96
SS18-221ENST00000582448 GABARAPO95166 117 aa9.05□□□□□ -0.96
SS18-221ENST00000582448 BCL10O95999 233 aa9.05□□□□□ -0.96
SS18-221ENST00000582448 IGHG3P01860 377 aa9.05□□□□□ -0.96
SS18-221ENST00000582448 GABRA1P14867 456 aa9.05□□□□□ -0.96
SS18-221ENST00000582448 ZNF17P17021 662 aa9.05□□□□□ -0.96
SS18-221ENST00000582448 PSMA1P25786 263 aaKnown RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms