RNA–Protein interactions for RNA: ENST00000580972.1

RNU4ATAC-201, Transcript of RNA, U4atac small nuclear (U12-dependent splicing), humanhuman

BASIC

Gene RNU4ATAC, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC-201ENST00000580972 RPS11P62280 158 aaKnown RBP eCLIP5.41□□□□□ -1.54
RNU4ATAC-201ENST00000580972 ARF1P84077 181 aaKnown RBP5.41□□□□□ -1.54
RNU4ATAC-201ENST00000580972 HGFACQ04756 655 aa5.41□□□□□ -1.54
RNU4ATAC-201ENST00000580972 GLO1Q04760 184 aa5.41□□□□□ -1.54
RNU4ATAC-201ENST00000580972 LY6DQ14210 128 aa5.41□□□□□ -1.54
RNU4ATAC-201ENST00000580972 CDK5R1Q15078 307 aa5.41□□□□□ -1.54
RNU4ATAC-201ENST00000580972 PCK2Q16822 640 aa5.41□□□□□ -1.54
RNU4ATAC-201ENST00000580972 CCDC92Q53HC0 331 aaPredicted RBP5.41□□□□□ -1.54
RNU4ATAC-201ENST00000580972 WDR38Q5JTN6 314 aa5.41□□□□□ -1.54
RNU4ATAC-201ENST00000580972 DMKNQ6E0U4 476 aaPredicted RBP5.41□□□□□ -1.54
RNU4ATAC-201ENST00000580972 VWA1Q6PCB0 445 aa5.41□□□□□ -1.54
RNU4ATAC-201ENST00000580972 PCSK4Q6UW60 755 aa5.41□□□□□ -1.54
RNU4ATAC-201ENST00000580972 FAM180AQ6UWF9 173 aa5.41□□□□□ -1.54
RNU4ATAC-201ENST00000580972 CHMP1BQ7LBR1 199 aa5.41□□□□□ -1.54
RNU4ATAC-201ENST00000580972 P4HA3Q7Z4N8 544 aa5.41□□□□□ -1.54
RNU4ATAC-201ENST00000580972 SYT9Q86SS6 491 aa5.41□□□□□ -1.54
RNU4ATAC-201ENST00000580972 MCEMP1Q8IX19 187 aa5.41□□□□□ -1.54
RNU4ATAC-201ENST00000580972 SYS1Q8N2H4 156 aa5.41□□□□□ -1.54
RNU4ATAC-201ENST00000580972 GPR137CQ8N3F9 429 aa5.41□□□□□ -1.54
RNU4ATAC-201ENST00000580972 NAXEQ8NCW5 288 aa5.41□□□□□ -1.54
RNU4ATAC-201ENST00000580972 OR10H5Q8NGA6 315 aa5.41□□□□□ -1.54
RNU4ATAC-201ENST00000580972 OR52N5Q8NH56 324 aa5.41□□□□□ -1.54
RNU4ATAC-201ENST00000580972 AKR7LQ8NHP1 331 aa5.41□□□□□ -1.54
RNU4ATAC-201ENST00000580972 RAB2BQ8WUD1 216 aa5.41□□□□□ -1.54
RNU4ATAC-201ENST00000580972 SNRNP27Q8WVK2 155 aaKnown RBP5.41□□□□□ -1.54
RNU4ATAC-201ENST00000580972 GHSRQ92847 366 aa5.41□□□□□ -1.54
RNU4ATAC-201ENST00000580972 PNPLA2Q96AD5 504 aa5.41□□□□□ -1.54
RNU4ATAC-201ENST00000580972 INTS12Q96CB8 462 aaKnown RBP5.41□□□□□ -1.54
RNU4ATAC-201ENST00000580972 SNRNP40Q96DI7 357 aaKnown RBP5.41□□□□□ -1.54
RNU4ATAC-201ENST00000580972 SLAMF6Q96DU3 332 aa5.41□□□□□ -1.54
RNU4ATAC-201ENST00000580972 FBXO17Q96EF6 278 aa5.41□□□□□ -1.54
RNU4ATAC-201ENST00000580972 DTNBP1Q96EV8 351 aa5.41□□□□□ -1.54
RNU4ATAC-201ENST00000580972 C4orf45Q96LM5 186 aa5.41□□□□□ -1.54
RNU4ATAC-201ENST00000580972 NKX3-1Q99801 234 aaPredicted RBP5.41□□□□□ -1.54
RNU4ATAC-201ENST00000580972 SOX7Q9BT81 388 aa5.41□□□□□ -1.54
RNU4ATAC-201ENST00000580972 NELFAQ9H3P2 528 aa5.41□□□□□ -1.54
RNU4ATAC-201ENST00000580972 PRORYQ9H606 182 aa5.41□□□□□ -1.54
RNU4ATAC-201ENST00000580972 RNF122Q9H9V4 155 aa5.41□□□□□ -1.54
RNU4ATAC-201ENST00000580972 BCO1Q9HAY6 547 aa5.41□□□□□ -1.54
RNU4ATAC-201ENST00000580972 ISYNA1Q9NPH2 558 aa5.41□□□□□ -1.54
RNU4ATAC-201ENST00000580972 BRD7Q9NPI1 651 aa5.41□□□□□ -1.54
RNU4ATAC-201ENST00000580972 ASF1BQ9NVP2 202 aa5.41□□□□□ -1.54
RNU4ATAC-201ENST00000580972 TMEM38BQ9NVV0 291 aa5.41□□□□□ -1.54
RNU4ATAC-201ENST00000580972 NDUFA13Q9P0J0 144 aa5.41□□□□□ -1.54
RNU4ATAC-201ENST00000580972 KLHL9Q9P2J3 617 aa5.41□□□□□ -1.54
RNU4ATAC-201ENST00000580972 CYB5R1Q9UHQ9 305 aa5.41□□□□□ -1.54
RNU4ATAC-201ENST00000580972 SH3BGRL2Q9UJC5 107 aa5.41□□□□□ -1.54
RNU4ATAC-201ENST00000580972 STUB1Q9UNE7 303 aa5.41□□□□□ -1.54
RNU4ATAC-201ENST00000580972 GTF2A1LQ9UNN4 478 aa5.41□□□□□ -1.54
RNU4ATAC-201ENST00000580972 ZNF175Q9Y473 711 aa5.41□□□□□ -1.54
RNU4ATAC-201ENST00000580972 LRP12Q9Y561 859 aa5.41□□□□□ -1.54
RNU4ATAC-201ENST00000580972 FAM215AQ9Y5M1 114 aa5.41□□□□□ -1.54
RNU4ATAC-201ENST00000580972 N6AMT1Q9Y5N5 214 aa5.41□□□□□ -1.54
RNU4ATAC-201ENST00000580972 FREM2Q5SZK8 3169 aa5.41□□□□□ -1.54
RNU4ATAC-201ENST00000580972 HEATR5AQ86XA9 2040 aa5.4□□□□□ -1.54
RNU4ATAC-201ENST00000580972 A0A1W2PR80 420 aa5.4□□□□□ -1.54
RNU4ATAC-201ENST00000580972 ANKRD61A6NGH8 418 aa5.4□□□□□ -1.54
RNU4ATAC-201ENST00000580972 ACOD1A6NK06 481 aa5.4□□□□□ -1.54
RNU4ATAC-201ENST00000580972 OR4C45A6NMZ5 311 aa5.4□□□□□ -1.54
RNU4ATAC-201ENST00000580972 ZNF724A8MTY0 619 aa5.4□□□□□ -1.54
RNU4ATAC-201ENST00000580972 PIN1P1O15428 100 aa5.4□□□□□ -1.54
RNU4ATAC-201ENST00000580972 AKAP8O43823 692 aaKnown RBP5.4□□□□□ -1.54
RNU4ATAC-201ENST00000580972 SS18L1O75177 396 aaPredicted RBP5.4□□□□□ -1.54
RNU4ATAC-201ENST00000580972 MRPL33O75394 65 aaKnown RBP5.4□□□□□ -1.54
RNU4ATAC-201ENST00000580972 RGS9O75916 674 aaPredicted RBP5.4□□□□□ -1.54
RNU4ATAC-201ENST00000580972 ZFPL1O95159 310 aa5.4□□□□□ -1.54
RNU4ATAC-201ENST00000580972 KRT8P05787 483 aa5.4□□□□□ -1.54
RNU4ATAC-201ENST00000580972 ITGA5P08648 1049 aa5.4□□□□□ -1.54
RNU4ATAC-201ENST00000580972 ABOP16442 354 aa5.4□□□□□ -1.54
RNU4ATAC-201ENST00000580972 PAX7P23759 505 aa5.4□□□□□ -1.54
RNU4ATAC-201ENST00000580972 HOXD11P31277 338 aaPredicted RBP5.4□□□□□ -1.54
RNU4ATAC-201ENST00000580972 GABRA5P31644 462 aa5.4□□□□□ -1.54
RNU4ATAC-201ENST00000580972 KIR2DL2P43627 348 aaPredicted RBP5.4□□□□□ -1.54
RNU4ATAC-201ENST00000580972 SOX2P48431 317 aa5.4□□□□□ -1.54
RNU4ATAC-201ENST00000580972 PRKXP51817 358 aa5.4□□□□□ -1.54
RNU4ATAC-201ENST00000580972 UCNP55089 124 aa5.4□□□□□ -1.54
RNU4ATAC-201ENST00000580972 PRSS12P56730 875 aa5.4□□□□□ -1.54
RNU4ATAC-201ENST00000580972 ACTA2P62736 377 aa5.4□□□□□ -1.54
RNU4ATAC-201ENST00000580972 ACTG2P63267 376 aa5.4□□□□□ -1.54
RNU4ATAC-201ENST00000580972 MXD1Q05195 221 aa5.4□□□□□ -1.54
RNU4ATAC-201ENST00000580972 ACSM1Q08AH1 577 aa5.4□□□□□ -1.54
RNU4ATAC-201ENST00000580972 FAPQ12884 760 aa5.4□□□□□ -1.54
RNU4ATAC-201ENST00000580972 ALKBH1Q13686 389 aaKnown RBP5.4□□□□□ -1.54
RNU4ATAC-201ENST00000580972 GUSBP1Q15486 140 aa5.4□□□□□ -1.54
RNU4ATAC-201ENST00000580972 KCNMB1Q16558 191 aa5.4□□□□□ -1.54
RNU4ATAC-201ENST00000580972 HIKESHIQ53FT3 197 aa5.4□□□□□ -1.54
RNU4ATAC-201ENST00000580972 TEX30Q5JUR7 227 aa5.4□□□□□ -1.54
RNU4ATAC-201ENST00000580972 SFRP5Q5T4F7 317 aa5.4□□□□□ -1.54
RNU4ATAC-201ENST00000580972 ZNF774Q6NX45 483 aa5.4□□□□□ -1.54
RNU4ATAC-201ENST00000580972 TFAP2EQ6VUC0 442 aa5.4□□□□□ -1.54
RNU4ATAC-201ENST00000580972 ZNF813Q6ZN06 617 aa5.4□□□□□ -1.54
RNU4ATAC-201ENST00000580972 HDDC2Q7Z4H3 204 aa5.4□□□□□ -1.54
RNU4ATAC-201ENST00000580972 FAM220AQ7Z4H9 259 aa5.4□□□□□ -1.54
RNU4ATAC-201ENST00000580972 BTLAQ7Z6A9 289 aa5.4□□□□□ -1.54
RNU4ATAC-201ENST00000580972 KRT77Q7Z794 578 aa5.4□□□□□ -1.54
RNU4ATAC-201ENST00000580972 NAA40Q86UY6 237 aa5.4□□□□□ -1.54
RNU4ATAC-201ENST00000580972 NR2C2APQ86WQ0 139 aa5.4□□□□□ -1.54
RNU4ATAC-201ENST00000580972 SKA3Q8IX90 412 aa5.4□□□□□ -1.54
RNU4ATAC-201ENST00000580972 ZNF100Q8IYN0 542 aa5.4□□□□□ -1.54
RNU4ATAC-201ENST00000580972 ALDH16A1Q8IZ83 802 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms