RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 CLEC18AA5D8T8 446 aa12.5□□□□□ -0.41
SKA2-205ENST00000580541 RAB36O95755 333 aa12.5□□□□□ -0.41
SKA2-205ENST00000580541 TFP02787 698 aa12.5□□□□□ -0.41
SKA2-205ENST00000580541 GAAP10253 952 aa12.5□□□□□ -0.41
SKA2-205ENST00000580541 RAB1AP62820 205 aa12.5□□□□□ -0.41
SKA2-205ENST00000580541 TFF3Q07654 80 aa12.5□□□□□ -0.41
SKA2-205ENST00000580541 RAB40BQ12829 278 aa12.5□□□□□ -0.41
SKA2-205ENST00000580541 PPA1Q15181 289 aa12.5□□□□□ -0.41
SKA2-205ENST00000580541 GSG1Q2KHT4 349 aa12.5□□□□□ -0.41
SKA2-205ENST00000580541 C3orf36Q3SXR2 165 aa12.5□□□□□ -0.41
SKA2-205ENST00000580541 HIKESHIQ53FT3 197 aa12.5□□□□□ -0.41
SKA2-205ENST00000580541 C6orf141Q5SZD1 244 aa12.5□□□□□ -0.41
SKA2-205ENST00000580541 CLEC18BQ6UXF7 455 aa12.5□□□□□ -0.41
SKA2-205ENST00000580541 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.5□□□□□ -0.41
SKA2-205ENST00000580541 CLEC18CQ8NCF0 446 aa12.5□□□□□ -0.41
SKA2-205ENST00000580541 IL17RDQ8NFM7 739 aa12.5□□□□□ -0.41
SKA2-205ENST00000580541 FBLIM1Q8WUP2 373 aa12.5□□□□□ -0.41
SKA2-205ENST00000580541 NABP1Q96AH0 204 aa12.5□□□□□ -0.41
SKA2-205ENST00000580541 DACH2Q96NX9 599 aa12.5□□□□□ -0.41
SKA2-205ENST00000580541 FOXN4Q96NZ1 517 aa12.5□□□□□ -0.41
SKA2-205ENST00000580541 SH3GL3Q99963 347 aa12.5□□□□□ -0.41
SKA2-205ENST00000580541 ZNF416Q9BWM5 594 aa12.5□□□□□ -0.41
SKA2-205ENST00000580541 YTHDF1Q9BYJ9 559 aaKnown RBP12.5□□□□□ -0.41
SKA2-205ENST00000580541 C1orf198Q9H425 327 aa12.5□□□□□ -0.41
SKA2-205ENST00000580541 WDR76Q9H967 626 aa12.5□□□□□ -0.41
SKA2-205ENST00000580541 PLCXD1Q9NUJ7 323 aa12.5□□□□□ -0.41
SKA2-205ENST00000580541 CYB5R1Q9UHQ9 305 aa12.5□□□□□ -0.41
SKA2-205ENST00000580541 BLOC1S6Q9UL45 172 aa12.5□□□□□ -0.41
SKA2-205ENST00000580541 TPRKBQ9Y3C4 175 aa12.5□□□□□ -0.41
SKA2-205ENST00000580541 COMMD3-BMI1R4GMX3 469 aa12.5□□□□□ -0.41
SKA2-205ENST00000580541 CCDC182A6NF36 153 aa12.49□□□□□ -0.41
SKA2-205ENST00000580541 EFCAB10A6NFE3 127 aa12.49□□□□□ -0.41
SKA2-205ENST00000580541 TVP23AA6NH52 213 aa12.49□□□□□ -0.41
SKA2-205ENST00000580541 WBP4O75554 376 aaKnown RBP12.49□□□□□ -0.41
SKA2-205ENST00000580541 SEC14L2O76054 403 aa12.49□□□□□ -0.41
SKA2-205ENST00000580541 MPZL1O95297 269 aa12.49□□□□□ -0.41
SKA2-205ENST00000580541 SPARCP09486 303 aa12.49□□□□□ -0.41
SKA2-205ENST00000580541 OR2T7P0C7T2 308 aa12.49□□□□□ -0.41
SKA2-205ENST00000580541 CBR1P16152 277 aa12.49□□□□□ -0.41
SKA2-205ENST00000580541 KIR2DL3P43628 341 aa12.49□□□□□ -0.41
SKA2-205ENST00000580541 NUDT6P53370 316 aa12.49□□□□□ -0.41
SKA2-205ENST00000580541 ACTC1P68032 377 aa12.49□□□□□ -0.41
SKA2-205ENST00000580541 ACTA1P68133 377 aa12.49□□□□□ -0.41
SKA2-205ENST00000580541 ECH1Q13011 328 aa12.49□□□□□ -0.41
SKA2-205ENST00000580541 TSC22D1Q15714 1073 aa12.49□□□□□ -0.41
SKA2-205ENST00000580541 PCK2Q16822 640 aa12.49□□□□□ -0.41
SKA2-205ENST00000580541 SLC18B1Q6NT16 456 aa12.49□□□□□ -0.41
SKA2-205ENST00000580541 KCTD18Q6PI47 426 aaPredicted RBP12.49□□□□□ -0.41
SKA2-205ENST00000580541 RHOUQ7L0Q8 258 aa12.49□□□□□ -0.41
SKA2-205ENST00000580541 BCDIN3DQ7Z5W3 292 aaKnown RBP12.49□□□□□ -0.41
SKA2-205ENST00000580541 TIGD4Q8IY51 512 aa12.49□□□□□ -0.41
SKA2-205ENST00000580541 OR1J2Q8NGS2 313 aa12.49□□□□□ -0.41
SKA2-205ENST00000580541 OR6N2Q8NGY6 317 aa12.49□□□□□ -0.41
SKA2-205ENST00000580541 OR2T27Q8NH04 317 aa12.49□□□□□ -0.41
SKA2-205ENST00000580541 OR52N5Q8NH56 324 aa12.49□□□□□ -0.41
SKA2-205ENST00000580541 CNIH3Q8TBE1 160 aa12.49□□□□□ -0.41
SKA2-205ENST00000580541 IPCEF1Q8WWN9 437 aaPredicted RBP12.49□□□□□ -0.41
SKA2-205ENST00000580541 ASB17Q8WXJ9 295 aa12.49□□□□□ -0.41
SKA2-205ENST00000580541 RNFT2Q96EX2 444 aa12.49□□□□□ -0.41
SKA2-205ENST00000580541 EMC7Q9NPA0 242 aa12.49□□□□□ -0.41
SKA2-205ENST00000580541 MRPS18AQ9NVS2 196 aaKnown RBP12.49□□□□□ -0.41
SKA2-205ENST00000580541 MRPL22Q9NWU5 206 aaKnown RBP12.49□□□□□ -0.41
SKA2-205ENST00000580541 CHCHD3Q9NX63 227 aaKnown RBP12.49□□□□□ -0.41
SKA2-205ENST00000580541 LAMP5Q9UJQ1 280 aa12.49□□□□□ -0.41
SKA2-205ENST00000580541 HCFC1P51610 2035 aa12.49□□□□□ -0.41
SKA2-205ENST00000580541 ZNF670-ZNF695F2Z2N8 137 aa12.48□□□□□ -0.41
SKA2-205ENST00000580541 FAM20BO75063 409 aa12.48□□□□□ -0.41
SKA2-205ENST00000580541 SBK2P0C263 348 aa12.48□□□□□ -0.41
SKA2-205ENST00000580541 CCDC159P0C7I6 412 aa12.48□□□□□ -0.41
SKA2-205ENST00000580541 DBTP11182 482 aaKnown RBP12.48□□□□□ -0.41
SKA2-205ENST00000580541 SLC15A1P46059 708 aa12.48□□□□□ -0.41
SKA2-205ENST00000580541 PIGFQ07326 219 aa12.48□□□□□ -0.41
SKA2-205ENST00000580541 ENDOGQ14249 297 aaKnown RBP12.48□□□□□ -0.41
SKA2-205ENST00000580541 CDSNQ15517 529 aa12.48□□□□□ -0.41
SKA2-205ENST00000580541 TAB1Q15750 504 aa12.48□□□□□ -0.41
SKA2-205ENST00000580541 RBM48Q5RL73 367 aaKnown RBP12.48□□□□□ -0.41
SKA2-205ENST00000580541 DPY19L4Q7Z388 723 aa12.48□□□□□ -0.41
SKA2-205ENST00000580541 EGFL6Q8IUX8 553 aa12.48□□□□□ -0.41
SKA2-205ENST00000580541 WDR31Q8NA23 367 aa12.48□□□□□ -0.41
SKA2-205ENST00000580541 BPIFB6Q8NFQ5 453 aa12.48□□□□□ -0.41
SKA2-205ENST00000580541 OR51G2Q8NGK0 314 aa12.48□□□□□ -0.41
SKA2-205ENST00000580541 OTOSQ8NHW6 89 aa12.48□□□□□ -0.41
SKA2-205ENST00000580541 APH1BQ8WW43 257 aa12.48□□□□□ -0.41
SKA2-205ENST00000580541 ZNRF4Q8WWF5 429 aa12.48□□□□□ -0.41
SKA2-205ENST00000580541 MYDGFQ969H8 173 aa12.48□□□□□ -0.41
SKA2-205ENST00000580541 WFIKKN1Q96NZ8 548 aa12.48□□□□□ -0.41
SKA2-205ENST00000580541 INPP5EQ9NRR6 644 aa12.48□□□□□ -0.41
SKA2-205ENST00000580541 B3GNT2Q9NY97 397 aa12.48□□□□□ -0.41
SKA2-205ENST00000580541 CNOT2Q9NZN8 540 aaKnown RBP12.48□□□□□ -0.41
SKA2-205ENST00000580541 ASH2LQ9UBL3 628 aa12.48□□□□□ -0.41
SKA2-205ENST00000580541 SLC25A15Q9Y619 301 aa12.48□□□□□ -0.41
SKA2-205ENST00000580541 PRSS44E7EML9 344 aa12.47□□□□□ -0.41
SKA2-205ENST00000580541 SGCEO43556 437 aa12.47□□□□□ -0.41
SKA2-205ENST00000580541 GPANK1O95872 356 aa12.47□□□□□ -0.41
SKA2-205ENST00000580541 HLA-HP01893 362 aa12.47□□□□□ -0.41
SKA2-205ENST00000580541 APOC1P02654 83 aa12.47□□□□□ -0.41
SKA2-205ENST00000580541 SERPINA5P05154 406 aa12.47□□□□□ -0.41
SKA2-205ENST00000580541 LYNP07948 512 aa12.47□□□□□ -0.41
SKA2-205ENST00000580541 COX5BP10606 129 aa12.47□□□□□ -0.41
SKA2-205ENST00000580541 EPXP11678 715 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms