RNA–Protein interactions for RNA: ENST00000580095.5

TOP3A-209, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 1 (best)

Gene TOP3A, Length 2,929 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-209ENST00000580095 NXPE2Q96DL1 559 aa9.42□□□□□ -0.9
TOP3A-209ENST00000580095 GINS4Q9BRT9 223 aa9.42□□□□□ -0.9
TOP3A-209ENST00000580095 PELOQ9BRX2 385 aaKnown RBP9.42□□□□□ -0.9
TOP3A-209ENST00000580095 MFRPQ9BY79 579 aa9.42□□□□□ -0.9
TOP3A-209ENST00000580095 CENPMQ9NSP4 180 aa9.42□□□□□ -0.9
TOP3A-209ENST00000580095 TAS2R4Q9NYW5 299 aa9.42□□□□□ -0.9
TOP3A-209ENST00000580095 STEAP1Q9UHE8 339 aa9.42□□□□□ -0.9
TOP3A-209ENST00000580095 CDV3Q9UKY7 258 aaKnown RBP9.42□□□□□ -0.9
TOP3A-209ENST00000580095 LOC100509620A0A075B734 347 aa9.42□□□□□ -0.9
TOP3A-209ENST00000580095 TRBV5-7A0A0A0MS05 114 aa9.42□□□□□ -0.9
TOP3A-209ENST00000580095 TMEM212A6NML5 194 aa9.42□□□□□ -0.9
TOP3A-209ENST00000580095 POM121CA8CG34 1229 aa9.42□□□□□ -0.9
TOP3A-209ENST00000580095 ALG1L2C9J202 215 aa9.42□□□□□ -0.9
TOP3A-209ENST00000580095 ZNF217O75362 1048 aa9.42□□□□□ -0.9
TOP3A-209ENST00000580095 PIAS2O75928 621 aa9.42□□□□□ -0.9
TOP3A-209ENST00000580095 CD3DP04234 171 aa9.42□□□□□ -0.9
TOP3A-209ENST00000580095 CALCBP10092 127 aa9.42□□□□□ -0.9
TOP3A-209ENST00000580095 LIPCP11150 499 aa9.42□□□□□ -0.9
TOP3A-209ENST00000580095 GTF2F2P13984 249 aa9.42□□□□□ -0.9
TOP3A-209ENST00000580095 PGCP20142 388 aa9.42□□□□□ -0.9
TOP3A-209ENST00000580095 PSMA6P60900 246 aaKnown RBP9.42□□□□□ -0.9
TOP3A-209ENST00000580095 ANGPT1Q15389 498 aa9.42□□□□□ -0.9
TOP3A-209ENST00000580095 GLYATL3Q5SZD4 288 aa9.42□□□□□ -0.9
TOP3A-209ENST00000580095 SFRP5Q5T4F7 317 aa9.42□□□□□ -0.9
TOP3A-209ENST00000580095 FAM69AQ5T7M9 428 aa9.42□□□□□ -0.9
TOP3A-209ENST00000580095 GPR139Q6DWJ6 353 aa9.42□□□□□ -0.9
TOP3A-209ENST00000580095 ZNF627Q7L945 461 aa9.42□□□□□ -0.9
TOP3A-209ENST00000580095 CHMP1BQ7LBR1 199 aa9.42□□□□□ -0.9
TOP3A-209ENST00000580095 DAZLQ92904 295 aaKnown RBP9.42□□□□□ -0.9
TOP3A-209ENST00000580095 FAM3DQ96BQ1 224 aa9.42□□□□□ -0.9
TOP3A-209ENST00000580095 ELMOD3Q96FG2 381 aa9.42□□□□□ -0.9
TOP3A-209ENST00000580095 CYYR1Q96J86 154 aa9.42□□□□□ -0.9
TOP3A-209ENST00000580095 OR8B4Q96RC9 309 aa9.42□□□□□ -0.9
TOP3A-209ENST00000580095 ACTR6Q9GZN1 396 aa9.42□□□□□ -0.9
TOP3A-209ENST00000580095 SLC22A11Q9NSA0 550 aa9.42□□□□□ -0.9
TOP3A-209ENST00000580095 PIPOXQ9P0Z9 390 aa9.42□□□□□ -0.9
TOP3A-209ENST00000580095 SCP2D1Q9UJQ7 156 aa9.42□□□□□ -0.9
TOP3A-209ENST00000580095 MRTO4Q9UKD2 239 aaKnown RBP9.42□□□□□ -0.9
TOP3A-209ENST00000580095 LRP12Q9Y561 859 aa9.42□□□□□ -0.9
TOP3A-209ENST00000580095 A0A1W2PPC1 479 aa9.42□□□□□ -0.9
TOP3A-209ENST00000580095 SLC22A23A1A5C7 686 aa9.42□□□□□ -0.9
TOP3A-209ENST00000580095 GGT3PA6NGU5 568 aa9.42□□□□□ -0.9
TOP3A-209ENST00000580095 M0QYG6 137 aa9.42□□□□□ -0.9
TOP3A-209ENST00000580095 GDF9O60383 454 aa9.42□□□□□ -0.9
TOP3A-209ENST00000580095 RBBP9O75884 186 aa9.42□□□□□ -0.9
TOP3A-209ENST00000580095 TIAF1O95411 115 aa9.42□□□□□ -0.9
TOP3A-209ENST00000580095 RAB40ALP0C0E4 278 aa9.42□□□□□ -0.9
TOP3A-209ENST00000580095 IFNGR1P15260 489 aa9.42□□□□□ -0.9
TOP3A-209ENST00000580095 POU3F2P20265 443 aaPredicted RBP9.42□□□□□ -0.9
TOP3A-209ENST00000580095 AP3S2P59780 193 aa9.42□□□□□ -0.9
TOP3A-209ENST00000580095 PUDPQ08623 228 aa9.42□□□□□ -0.9
TOP3A-209ENST00000580095 JAGN1Q8N5M9 183 aa9.42□□□□□ -0.9
TOP3A-209ENST00000580095 OR1N1Q8NGS0 311 aa9.42□□□□□ -0.9
TOP3A-209ENST00000580095 RAB40AQ8WXH6 277 aa9.42□□□□□ -0.9
TOP3A-209ENST00000580095 MCHR2Q969V1 340 aa9.42□□□□□ -0.9
TOP3A-209ENST00000580095 SGK3Q96BR1 496 aa9.42□□□□□ -0.9
TOP3A-209ENST00000580095 C8orf44Q96CB5 159 aa9.42□□□□□ -0.9
TOP3A-209ENST00000580095 RBP7Q96R05 134 aa9.42□□□□□ -0.9
TOP3A-209ENST00000580095 C7orf50Q9BRJ6 194 aaKnown RBP9.42□□□□□ -0.9
TOP3A-209ENST00000580095 PLEKHA1Q9HB21 404 aa9.42□□□□□ -0.9
TOP3A-209ENST00000580095 SLC39A1Q9NY26 324 aa9.42□□□□□ -0.9
TOP3A-209ENST00000580095 SUSD2Q9UGT4 822 aa9.42□□□□□ -0.9
TOP3A-209ENST00000580095 TINAGQ9UJW2 476 aa9.42□□□□□ -0.9
TOP3A-209ENST00000580095 MMACHCQ9Y4U1 282 aa9.42□□□□□ -0.9
TOP3A-209ENST00000580095 TNRC18O15417 2968 aaPredicted RBP9.41□□□□□ -0.9
TOP3A-209ENST00000580095 IGLV1-36A0A0B4J1U3 117 aa9.41□□□□□ -0.9
TOP3A-209ENST00000580095 PLPP3O14495 311 aa9.41□□□□□ -0.9
TOP3A-209ENST00000580095 ECDO95905 644 aaPredicted RBP9.41□□□□□ -0.9
TOP3A-209ENST00000580095 CSRP1P21291 193 aaKnown RBP9.41□□□□□ -0.9
TOP3A-209ENST00000580095 SLC6A8P48029 635 aa9.41□□□□□ -0.9
TOP3A-209ENST00000580095 NXPH1P58417 271 aa9.41□□□□□ -0.9
TOP3A-209ENST00000580095 SGCBQ16585 318 aa9.41□□□□□ -0.9
TOP3A-209ENST00000580095 Q3ZCU0 254 aa9.41□□□□□ -0.9
TOP3A-209ENST00000580095 EMC4Q5J8M3 183 aa9.41□□□□□ -0.9
TOP3A-209ENST00000580095 SLC18B1Q6NT16 456 aa9.41□□□□□ -0.9
TOP3A-209ENST00000580095 GLDNQ6ZMI3 551 aaPredicted RBP9.41□□□□□ -0.9
TOP3A-209ENST00000580095 C17orf82Q86X59 251 aaPredicted RBP9.41□□□□□ -0.9
TOP3A-209ENST00000580095 ZNF679Q8IYX0 411 aa9.41□□□□□ -0.9
TOP3A-209ENST00000580095 OR52H1Q8NGJ2 320 aa9.41□□□□□ -0.9
TOP3A-209ENST00000580095 OR1J4Q8NGS1 313 aa9.41□□□□□ -0.9
TOP3A-209ENST00000580095 ZNF519Q8TB69 540 aa9.41□□□□□ -0.9
TOP3A-209ENST00000580095 SORCS2Q96PQ0 1159 aa9.41□□□□□ -0.9
TOP3A-209ENST00000580095 SDHAF3Q9NRP4 125 aa9.41□□□□□ -0.9
TOP3A-209ENST00000580095 ARID1AO14497 2285 aa9.41□□□□□ -0.9
TOP3A-209ENST00000580095 LINC00587B1AMM8 73 aa9.41□□□□□ -0.9
TOP3A-209ENST00000580095 PRSS44E7EML9 344 aa9.41□□□□□ -0.9
TOP3A-209ENST00000580095 XRCC3O43542 346 aa9.41□□□□□ -0.9
TOP3A-209ENST00000580095 AHSA1O95433 338 aa9.41□□□□□ -0.9
TOP3A-209ENST00000580095 CXCL2P19875 107 aa9.41□□□□□ -0.9
TOP3A-209ENST00000580095 POLR2HP52434 150 aaKnown RBP9.41□□□□□ -0.9
TOP3A-209ENST00000580095 H2BFSP57053 126 aa9.41□□□□□ -0.9
TOP3A-209ENST00000580095 POU3F1Q03052 451 aaPredicted RBP9.41□□□□□ -0.9
TOP3A-209ENST00000580095 EGR3Q06889 387 aa9.41□□□□□ -0.9
TOP3A-209ENST00000580095 RASGEF1BQ0VAM2 473 aa9.41□□□□□ -0.9
TOP3A-209ENST00000580095 SGCAQ16586 387 aa9.41□□□□□ -0.9
TOP3A-209ENST00000580095 MOGAT2Q3SYC2 334 aa9.41□□□□□ -0.9
TOP3A-209ENST00000580095 DCAF12L2Q5VW00 463 aa9.41□□□□□ -0.9
TOP3A-209ENST00000580095 DCXRQ7Z4W1 244 aa9.41□□□□□ -0.9
TOP3A-209ENST00000580095 RTN4RL2Q86UN3 420 aa9.41□□□□□ -0.9
TOP3A-209ENST00000580095 ZBTB44Q8NCP5 570 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms