RNA–Protein interactions for RNA: ENST00000579605.5

CDK5RAP3-213, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 560 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-213ENST00000579605 LIPAP38571 399 aa10.97□□□□□ -0.65
CDK5RAP3-213ENST00000579605 WNT5AP41221 380 aa10.97□□□□□ -0.65
CDK5RAP3-213ENST00000579605 MAGOHP61326 146 aaKnown RBP10.97□□□□□ -0.65
CDK5RAP3-213ENST00000579605 CDK6Q00534 326 aa10.97□□□□□ -0.65
CDK5RAP3-213ENST00000579605 SLC36A2Q495M3 483 aa10.97□□□□□ -0.65
CDK5RAP3-213ENST00000579605 FOXB2Q5VYV0 432 aa10.97□□□□□ -0.65
CDK5RAP3-213ENST00000579605 FAM91A1Q658Y4 838 aa10.97□□□□□ -0.65
CDK5RAP3-213ENST00000579605 REEP3Q6NUK4 255 aa10.97□□□□□ -0.65
CDK5RAP3-213ENST00000579605 GDPGP1Q6ZNW5 385 aa10.97□□□□□ -0.65
CDK5RAP3-213ENST00000579605 MUC20Q8N307 709 aaPredicted RBP10.97□□□□□ -0.65
CDK5RAP3-213ENST00000579605 LRRC18Q8N456 261 aa10.97□□□□□ -0.65
CDK5RAP3-213ENST00000579605 FITM2Q8N6M3 262 aa10.97□□□□□ -0.65
CDK5RAP3-213ENST00000579605 C10orf53Q8N6V4 93 aa10.97□□□□□ -0.65
CDK5RAP3-213ENST00000579605 SCAIQ8N9R8 606 aa10.97□□□□□ -0.65
CDK5RAP3-213ENST00000579605 OR2Z1Q8NG97 314 aa10.97□□□□□ -0.65
CDK5RAP3-213ENST00000579605 OR6S1Q8NH40 331 aa10.97□□□□□ -0.65
CDK5RAP3-213ENST00000579605 PLEKHA8Q96JA3 519 aa10.97□□□□□ -0.65
CDK5RAP3-213ENST00000579605 SIGLEC11Q96RL6 698 aa10.97□□□□□ -0.65
CDK5RAP3-213ENST00000579605 CDADC1Q9BWV3 514 aa10.97□□□□□ -0.65
CDK5RAP3-213ENST00000579605 SLC19A3Q9BZV2 496 aa10.97□□□□□ -0.65
CDK5RAP3-213ENST00000579605 ACOXLQ9NUZ1 547 aa10.97□□□□□ -0.65
CDK5RAP3-213ENST00000579605 TMEM38BQ9NVV0 291 aa10.97□□□□□ -0.65
CDK5RAP3-213ENST00000579605 GLTPQ9NZD2 209 aa10.97□□□□□ -0.65
CDK5RAP3-213ENST00000579605 USH1CQ9Y6N9 552 aa10.97□□□□□ -0.65
CDK5RAP3-213ENST00000579605 PLXNB1O43157 2135 aa10.96□□□□□ -0.65
CDK5RAP3-213ENST00000579605 DNAH9Q9NYC9 4486 aa10.96□□□□□ -0.65
CDK5RAP3-213ENST00000579605 A0A0U1RQK1 487 aa10.96□□□□□ -0.65
CDK5RAP3-213ENST00000579605 CENPVL3A0A0U1RRI6 287 aa10.96□□□□□ -0.65
CDK5RAP3-213ENST00000579605 C5orf49A4QMS7 147 aa10.96□□□□□ -0.65
CDK5RAP3-213ENST00000579605 PRORSD1PA6NEY8 169 aa10.96□□□□□ -0.65
CDK5RAP3-213ENST00000579605 C11orf98E9PRG8 122 aa10.96□□□□□ -0.65
CDK5RAP3-213ENST00000579605 TMEM178BH3BS89 294 aa10.96□□□□□ -0.65
CDK5RAP3-213ENST00000579605 K7EIL1 84 aa10.96□□□□□ -0.65
CDK5RAP3-213ENST00000579605 XPNPEP2O43895 674 aa10.96□□□□□ -0.65
CDK5RAP3-213ENST00000579605 TPST1O60507 370 aa10.96□□□□□ -0.65
CDK5RAP3-213ENST00000579605 ENTPD5O75356 428 aa10.96□□□□□ -0.65
CDK5RAP3-213ENST00000579605 HOXB9P17482 250 aaPredicted RBP10.96□□□□□ -0.65
CDK5RAP3-213ENST00000579605 TNFRSF1AP19438 455 aa10.96□□□□□ -0.65
CDK5RAP3-213ENST00000579605 TNFSF4P23510 183 aa10.96□□□□□ -0.65
CDK5RAP3-213ENST00000579605 IER3P46695 156 aa10.96□□□□□ -0.65
CDK5RAP3-213ENST00000579605 RGS8P57771 180 aaPredicted RBP10.96□□□□□ -0.65
CDK5RAP3-213ENST00000579605 OR1Q1Q15612 314 aa10.96□□□□□ -0.65
CDK5RAP3-213ENST00000579605 NRN1LQ496H8 165 aa10.96□□□□□ -0.65
CDK5RAP3-213ENST00000579605 MBNL2Q5VZF2 373 aaKnown RBP10.96□□□□□ -0.65
CDK5RAP3-213ENST00000579605 LRFN4Q6PJG9 635 aa10.96□□□□□ -0.65
CDK5RAP3-213ENST00000579605 EPGNQ6UW88 154 aa10.96□□□□□ -0.65
CDK5RAP3-213ENST00000579605 NHLRC1Q6VVB1 395 aa10.96□□□□□ -0.65
CDK5RAP3-213ENST00000579605 COMTD1Q86VU5 262 aa10.96□□□□□ -0.65
CDK5RAP3-213ENST00000579605 ITLN1Q8WWA0 313 aa10.96□□□□□ -0.65
CDK5RAP3-213ENST00000579605 GATAD2BQ8WXI9 593 aa10.96□□□□□ -0.65
CDK5RAP3-213ENST00000579605 TMEM54Q969K7 222 aa10.96□□□□□ -0.65
CDK5RAP3-213ENST00000579605 DACT3Q96B18 629 aaPredicted RBP10.96□□□□□ -0.65
CDK5RAP3-213ENST00000579605 SAMD8Q96LT4 415 aa10.96□□□□□ -0.65
CDK5RAP3-213ENST00000579605 ZNF607Q96SK3 696 aa10.96□□□□□ -0.65
CDK5RAP3-213ENST00000579605 TMEM165Q9HC07 324 aa10.96□□□□□ -0.65
CDK5RAP3-213ENST00000579605 SLC25A37Q9NYZ2 338 aa10.96□□□□□ -0.65
CDK5RAP3-213ENST00000579605 KIF17Q9P2E2 1029 aa10.96□□□□□ -0.65
CDK5RAP3-213ENST00000579605 MIOXQ9UGB7 285 aa10.96□□□□□ -0.65
CDK5RAP3-213ENST00000579605 FOXJ3Q9UPW0 622 aa10.96□□□□□ -0.65
CDK5RAP3-213ENST00000579605 SIGLEC9Q9Y336 463 aa10.96□□□□□ -0.65
CDK5RAP3-213ENST00000579605 TET2Q6N021 2002 aaPredicted RBP10.96□□□□□ -0.66
CDK5RAP3-213ENST00000579605 LRRN3E7EW58 273 aa10.95□□□□□ -0.66
CDK5RAP3-213ENST00000579605 POLR3GO15318 223 aaPredicted RBP10.95□□□□□ -0.66
CDK5RAP3-213ENST00000579605 SERPINB7O75635 380 aa10.95□□□□□ -0.66
CDK5RAP3-213ENST00000579605 BGLAPP02818 100 aa10.95□□□□□ -0.66
CDK5RAP3-213ENST00000579605 SLC6A2P23975 617 aa10.95□□□□□ -0.66
CDK5RAP3-213ENST00000579605 STOMP27105 288 aa10.95□□□□□ -0.66
CDK5RAP3-213ENST00000579605 CD69Q07108 199 aa10.95□□□□□ -0.66
CDK5RAP3-213ENST00000579605 PUDPQ08623 228 aa10.95□□□□□ -0.66
CDK5RAP3-213ENST00000579605 CDK5R2Q13319 367 aa10.95□□□□□ -0.66
CDK5RAP3-213ENST00000579605 SCARB2Q14108 478 aa10.95□□□□□ -0.66
CDK5RAP3-213ENST00000579605 NSUN5P1Q3KNT7 163 aa10.95□□□□□ -0.66
CDK5RAP3-213ENST00000579605 ZMAT1Q5H9K5 638 aa10.95□□□□□ -0.66
CDK5RAP3-213ENST00000579605 MTX3Q5HYI7 312 aa10.95□□□□□ -0.66
CDK5RAP3-213ENST00000579605 PABPC1L2AQ5JQF8 200 aa10.95□□□□□ -0.66
CDK5RAP3-213ENST00000579605 LRIF1Q5T3J3 769 aa10.95□□□□□ -0.66
CDK5RAP3-213ENST00000579605 SLC35E4Q6ICL7 350 aa10.95□□□□□ -0.66
CDK5RAP3-213ENST00000579605 VASH1Q7L8A9 365 aaPredicted RBP10.95□□□□□ -0.66
CDK5RAP3-213ENST00000579605 MSRB3Q8IXL7 192 aa10.95□□□□□ -0.66
CDK5RAP3-213ENST00000579605 PDZD9Q8IXQ8 264 aa10.95□□□□□ -0.66
CDK5RAP3-213ENST00000579605 SCCPDHQ8NBX0 429 aa10.95□□□□□ -0.66
CDK5RAP3-213ENST00000579605 OR8B3Q8NGG8 313 aa10.95□□□□□ -0.66
CDK5RAP3-213ENST00000579605 ABHD4Q8TB40 342 aa10.95□□□□□ -0.66
CDK5RAP3-213ENST00000579605 SPDL1Q96EA4 605 aa10.95□□□□□ -0.66
CDK5RAP3-213ENST00000579605 NEIL1Q96FI4 390 aaPredicted RBP10.95□□□□□ -0.66
CDK5RAP3-213ENST00000579605 SLC41A3Q96GZ6 507 aa10.95□□□□□ -0.66
CDK5RAP3-213ENST00000579605 OR8B2Q96RD0 313 aa10.95□□□□□ -0.66
CDK5RAP3-213ENST00000579605 TRIM15Q9C019 465 aa10.95□□□□□ -0.66
CDK5RAP3-213ENST00000579605 MRPL39Q9NYK5 338 aaKnown RBP10.95□□□□□ -0.66
CDK5RAP3-213ENST00000579605 CCDC167Q9P0B6 97 aa10.95□□□□□ -0.66
CDK5RAP3-213ENST00000579605 SLAMF8Q9P0V8 285 aa10.95□□□□□ -0.66
CDK5RAP3-213ENST00000579605 CORO2BQ9UQ03 480 aa10.95□□□□□ -0.66
CDK5RAP3-213ENST00000579605 COL7A1Q02388 2944 aa10.95□□□□□ -0.66
CDK5RAP3-213ENST00000579605 A0A0B4J2E0 115 aa10.94□□□□□ -0.66
CDK5RAP3-213ENST00000579605 A0A1B0GX12 115 aa10.94□□□□□ -0.66
CDK5RAP3-213ENST00000579605 EVPLLA8MZ36 301 aa10.94□□□□□ -0.66
CDK5RAP3-213ENST00000579605 P2RY10O00398 339 aa10.94□□□□□ -0.66
CDK5RAP3-213ENST00000579605 TSPAN9O75954 239 aa10.94□□□□□ -0.66
CDK5RAP3-213ENST00000579605 TOX4O94842 621 aa10.94□□□□□ -0.66
CDK5RAP3-213ENST00000579605 OR6A2O95222 327 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms