RNA–Protein interactions for RNA: ENST00000579451.1

PSMD11-208, Transcript of proteasome 26S subunit, non-ATPase 11, human

TSL 2

Gene PSMD11, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD11-208	ENST00000579451	C22orf15	Q8WYQ4	148 aa		12.83	□□□□□ -0.36
PSMD11-208	ENST00000579451	DVL3	Q92997	716 aa	Predicted RBP	12.83	□□□□□ -0.36
PSMD11-208	ENST00000579451	MAGEB18	Q96M61	343 aa		12.83	□□□□□ -0.36
PSMD11-208	ENST00000579451	RBP7	Q96R05	134 aa		12.83	□□□□□ -0.36
PSMD11-208	ENST00000579451	SH3GL1	Q99961	368 aa		12.83	□□□□□ -0.36
PSMD11-208	ENST00000579451	ELOVL3	Q9HB03	270 aa		12.83	□□□□□ -0.36
PSMD11-208	ENST00000579451	INTS9	Q9NV88	658 aa	Known RBP	12.83	□□□□□ -0.36
PSMD11-208	ENST00000579451	NPTN	Q9Y639	398 aa		12.83	□□□□□ -0.36
PSMD11-208	ENST00000579451	HTR3E	A5X5Y0	456 aa		12.82	□□□□□ -0.36
PSMD11-208	ENST00000579451	PIP5K1C	O60331	668 aa		12.82	□□□□□ -0.36
PSMD11-208	ENST00000579451	IGHM	P01871	453 aa		12.82	□□□□□ -0.36
PSMD11-208	ENST00000579451	OR1E2	P47887	323 aa		12.82	□□□□□ -0.36
PSMD11-208	ENST00000579451	ARHGDIA	P52565	204 aa		12.82	□□□□□ -0.36
PSMD11-208	ENST00000579451	PCBD1	P61457	104 aa		12.82	□□□□□ -0.36
PSMD11-208	ENST00000579451	UBA52	P62987	128 aa	Known RBP	12.82	□□□□□ -0.36
PSMD11-208	ENST00000579451	TOP3A	Q13472	1001 aa	Predicted RBP	12.82	□□□□□ -0.36
PSMD11-208	ENST00000579451	SPRN	Q5BIV9	151 aa		12.82	□□□□□ -0.36
PSMD11-208	ENST00000579451	RABL3	Q5HYI8	236 aa		12.82	□□□□□ -0.36
PSMD11-208	ENST00000579451	METTL21C	Q5VZV1	264 aa		12.82	□□□□□ -0.36
PSMD11-208	ENST00000579451	FOXL2NB	Q6ZUU3	175 aa		12.82	□□□□□ -0.36
PSMD11-208	ENST00000579451	CLDN22	Q8N7P3	220 aa		12.82	□□□□□ -0.36
PSMD11-208	ENST00000579451	OR8J3	Q8NGG0	315 aa		12.82	□□□□□ -0.36
PSMD11-208	ENST00000579451	C4orf45	Q96LM5	186 aa		12.82	□□□□□ -0.36
PSMD11-208	ENST00000579451	ECSIT	Q9BQ95	431 aa		12.82	□□□□□ -0.36
PSMD11-208	ENST00000579451	MSL2	Q9HCI7	577 aa		12.82	□□□□□ -0.36
PSMD11-208	ENST00000579451	DDX28	Q9NUL7	540 aa	Known RBP	12.82	□□□□□ -0.36
PSMD11-208	ENST00000579451	TIMM10B	Q9Y5J6	103 aa		12.82	□□□□□ -0.36
PSMD11-208	ENST00000579451	TRRAP	Q9Y4A5	3859 aa		12.81	□□□□□ -0.36
PSMD11-208	ENST00000579451	FXYD1	O00168	92 aa		12.81	□□□□□ -0.36
PSMD11-208	ENST00000579451	IFNA14	P01570	189 aa		12.81	□□□□□ -0.36
PSMD11-208	ENST00000579451	IGHV2-70	P01814	119 aa		12.81	□□□□□ -0.36
PSMD11-208	ENST00000579451	ZFP36	P26651	326 aa	Known RBP	12.81	□□□□□ -0.36
PSMD11-208	ENST00000579451	GUCA1A	P43080	201 aa	Predicted RBP	12.81	□□□□□ -0.36
PSMD11-208	ENST00000579451	TNFAIP6	P98066	277 aa	Predicted RBP	12.81	□□□□□ -0.36
PSMD11-208	ENST00000579451	ST3GAL3	Q11203	375 aa		12.81	□□□□□ -0.36
PSMD11-208	ENST00000579451	CDK5R2	Q13319	367 aa		12.81	□□□□□ -0.36
PSMD11-208	ENST00000579451	TUSC1	Q2TAM9	212 aa		12.81	□□□□□ -0.36
PSMD11-208	ENST00000579451	MTX3	Q5HYI7	312 aa		12.81	□□□□□ -0.36
PSMD11-208	ENST00000579451	FAM205BP	Q63HN1	556 aa		12.81	□□□□□ -0.36
PSMD11-208	ENST00000579451	ZNF774	Q6NX45	483 aa		12.81	□□□□□ -0.36
PSMD11-208	ENST00000579451	ERICH5	Q6P6B1	374 aa		12.81	□□□□□ -0.36
PSMD11-208	ENST00000579451	ZER1	Q7Z7L7	766 aa		12.81	□□□□□ -0.36
PSMD11-208	ENST00000579451	SYT9	Q86SS6	491 aa		12.81	□□□□□ -0.36
PSMD11-208	ENST00000579451	POP5	Q969H6	163 aa	Known RBP	12.81	□□□□□ -0.36
PSMD11-208	ENST00000579451	LRRC58	Q96CX6	371 aa		12.81	□□□□□ -0.36
PSMD11-208	ENST00000579451	BPIFA2	Q96DR5	249 aa		12.81	□□□□□ -0.36
PSMD11-208	ENST00000579451	SIKE1	Q9BRV8	207 aa		12.81	□□□□□ -0.36
PSMD11-208	ENST00000579451	NPHS2	Q9NP85	383 aa		12.81	□□□□□ -0.36
PSMD11-208	ENST00000579451	NDRG4	Q9ULP0	352 aa	Known RBP	12.81	□□□□□ -0.36
PSMD11-208	ENST00000579451	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	12.81	□□□□□ -0.36
PSMD11-208	ENST00000579451	PPIAL4A	Q9Y536	164 aa		12.81	□□□□□ -0.36
PSMD11-208	ENST00000579451		A0A0G2JND7	137 aa		12.8	□□□□□ -0.36
PSMD11-208	ENST00000579451		A0A1W2PPL8	197 aa		12.8	□□□□□ -0.36
PSMD11-208	ENST00000579451	TIMM8A	O60220	97 aa	Predicted RBP	12.8	□□□□□ -0.36
PSMD11-208	ENST00000579451	EDF1	O60869	148 aa	Known RBP	12.8	□□□□□ -0.36
PSMD11-208	ENST00000579451	HKR1	P10072	659 aa		12.8	□□□□□ -0.36
PSMD11-208	ENST00000579451	IFI30	P13284	250 aa		12.8	□□□□□ -0.36
PSMD11-208	ENST00000579451	CTXN1	P60606	82 aa		12.8	□□□□□ -0.36
PSMD11-208	ENST00000579451	FOXL1	Q12952	345 aa		12.8	□□□□□ -0.36
PSMD11-208	ENST00000579451	PSG7	Q13046	419 aa		12.8	□□□□□ -0.36
PSMD11-208	ENST00000579451	ENDOG	Q14249	297 aa	Known RBP	12.8	□□□□□ -0.36
PSMD11-208	ENST00000579451	ARL9	Q6T311	187 aa		12.8	□□□□□ -0.36
PSMD11-208	ENST00000579451	IGFN1	Q86VF2	1251 aa		12.8	□□□□□ -0.36
PSMD11-208	ENST00000579451	LRRC75A	Q8NAA5	344 aa		12.8	□□□□□ -0.36
PSMD11-208	ENST00000579451	DEFB108B	Q8NET1	73 aa		12.8	□□□□□ -0.36
PSMD11-208	ENST00000579451	ZNF583	Q96ND8	569 aa		12.8	□□□□□ -0.36
PSMD11-208	ENST00000579451	DCLRE1C	Q96SD1	692 aa	Known RBP	12.8	□□□□□ -0.36
PSMD11-208	ENST00000579451	ZNF747	Q9BV97	191 aa		12.8	□□□□□ -0.36
PSMD11-208	ENST00000579451	MMP26	Q9NRE1	261 aa		12.8	□□□□□ -0.36
PSMD11-208	ENST00000579451	TMEM106B	Q9NUM4	274 aa		12.8	□□□□□ -0.36
PSMD11-208	ENST00000579451	DCAF16	Q9NXF7	216 aa		12.8	□□□□□ -0.36
PSMD11-208	ENST00000579451	PURG	Q9UJV8	347 aa	Known RBP	12.8	□□□□□ -0.36
PSMD11-208	ENST00000579451	A4GNT	Q9UNA3	340 aa		12.8	□□□□□ -0.36
PSMD11-208	ENST00000579451		A6NIZ1	184 aa		12.79	□□□□□ -0.36
PSMD11-208	ENST00000579451	C12orf71	A8MTZ7	269 aa		12.79	□□□□□ -0.36
PSMD11-208	ENST00000579451	ABHD16A	O95870	558 aa		12.79	□□□□□ -0.36
PSMD11-208	ENST00000579451	NPPA	P01160	153 aa		12.79	□□□□□ -0.36
PSMD11-208	ENST00000579451	SBK2	P0C263	348 aa		12.79	□□□□□ -0.36
PSMD11-208	ENST00000579451	COX5B	P10606	129 aa		12.79	□□□□□ -0.36
PSMD11-208	ENST00000579451	TNFRSF1A	P19438	455 aa		12.79	□□□□□ -0.36
PSMD11-208	ENST00000579451	MSR1	P21757	451 aa		12.79	□□□□□ -0.36
PSMD11-208	ENST00000579451	TUBG1	P23258	451 aa		12.79	□□□□□ -0.36
PSMD11-208	ENST00000579451	KDELR2	P33947	212 aa		12.79	□□□□□ -0.36
PSMD11-208	ENST00000579451	RAP1B	P61224	184 aa		12.79	□□□□□ -0.36
PSMD11-208	ENST00000579451	RAP1A	P62834	184 aa		12.79	□□□□□ -0.36
PSMD11-208	ENST00000579451	HNRNPA0	Q13151	305 aa	Known RBP	12.79	□□□□□ -0.36
PSMD11-208	ENST00000579451	TMEM155	Q4W5P6	130 aa		12.79	□□□□□ -0.36
PSMD11-208	ENST00000579451	CYBRD1	Q53TN4	286 aa		12.79	□□□□□ -0.36
PSMD11-208	ENST00000579451	ARMCX4	Q5H9R4	360 aa		12.79	□□□□□ -0.36
PSMD11-208	ENST00000579451	COQ5	Q5HYK3	327 aa		12.79	□□□□□ -0.36
PSMD11-208	ENST00000579451	RBMS3	Q6XE24	437 aa	Known RBP	12.79	□□□□□ -0.36
PSMD11-208	ENST00000579451	DOK3	Q7L591	496 aa		12.79	□□□□□ -0.36
PSMD11-208	ENST00000579451	KLHL36	Q8N4N3	616 aa		12.79	□□□□□ -0.36
PSMD11-208	ENST00000579451	SPIC	Q8N5J4	248 aa		12.79	□□□□□ -0.36
PSMD11-208	ENST00000579451	ZNF283	Q8N7M2	679 aa		12.79	□□□□□ -0.36
PSMD11-208	ENST00000579451	SIGLECL1	Q8N7X8	197 aa		12.79	□□□□□ -0.36
PSMD11-208	ENST00000579451	NPEPL1	Q8NDH3	523 aa		12.79	□□□□□ -0.36
PSMD11-208	ENST00000579451	C10orf82	Q8WW14	230 aa		12.79	□□□□□ -0.36
PSMD11-208	ENST00000579451	SAMD8	Q96LT4	415 aa		12.79	□□□□□ -0.36
PSMD11-208	ENST00000579451	PRRC1	Q96M27	445 aa		12.79	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 1121.8 ms