RNA–Protein interactions for RNA: ENST00000577751.5

SS18-208, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-208ENST00000577751 GDF2Q9UK05 429 aaPredicted RBP16.67■□□□□ 0.26
SS18-208ENST00000577751 B9D1Q9UPM9 204 aa16.67■□□□□ 0.26
SS18-208ENST00000577751 RTTNQ86VV8 2226 aa16.67■□□□□ 0.26
SS18-208ENST00000577751 MAP1AP78559 2803 aaPredicted RBP16.66■□□□□ 0.26
SS18-208ENST00000577751 TMEM129A0AVI4 362 aa16.66■□□□□ 0.26
SS18-208ENST00000577751 OR6C68A6NDL8 312 aa16.66■□□□□ 0.26
SS18-208ENST00000577751 MPZL1O95297 269 aa16.66■□□□□ 0.26
SS18-208ENST00000577751 CCL2P13500 99 aa16.66■□□□□ 0.26
SS18-208ENST00000577751 CD99P14209 185 aa16.66■□□□□ 0.26
SS18-208ENST00000577751 GALK2Q01415 458 aa16.66■□□□□ 0.26
SS18-208ENST00000577751 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.66■□□□□ 0.26
SS18-208ENST00000577751 CCNIQ14094 377 aa16.66■□□□□ 0.26
SS18-208ENST00000577751 MSMPQ1L6U9 139 aa16.66■□□□□ 0.26
SS18-208ENST00000577751 TBC1D28Q2M2D7 210 aa16.66■□□□□ 0.26
SS18-208ENST00000577751 DNM1P34Q6PK57 102 aa16.66■□□□□ 0.26
SS18-208ENST00000577751 CCDC121Q6ZUS5 278 aa16.66■□□□□ 0.26
SS18-208ENST00000577751 SDR9C7Q8NEX9 313 aa16.66■□□□□ 0.26
SS18-208ENST00000577751 OR4Q3Q8NH05 313 aa16.66■□□□□ 0.26
SS18-208ENST00000577751 AKR7LQ8NHP1 331 aa16.66■□□□□ 0.26
SS18-208ENST00000577751 POM121L2Q96KW2 1035 aa16.66■□□□□ 0.26
SS18-208ENST00000577751 DOK1Q99704 481 aa16.66■□□□□ 0.26
SS18-208ENST00000577751 RACGAP1Q9H0H5 632 aa16.66■□□□□ 0.26
SS18-208ENST00000577751 RERGLQ9H628 205 aa16.66■□□□□ 0.26
SS18-208ENST00000577751 SRA1Q9HD15 236 aaKnown RBP16.66■□□□□ 0.26
SS18-208ENST00000577751 ARMC1Q9NVT9 282 aa16.66■□□□□ 0.26
SS18-208ENST00000577751 BAIAP2Q9UQB8 552 aa16.66■□□□□ 0.26
SS18-208ENST00000577751 PMF1-BGLAPU3KQ54 211 aa16.66■□□□□ 0.26
SS18-208ENST00000577751 LOC100509620A0A075B734 347 aa16.65■□□□□ 0.26
SS18-208ENST00000577751 GPRIN2O60269 458 aa16.65■□□□□ 0.26
SS18-208ENST00000577751 DEAF1O75398 565 aaPredicted RBP16.65■□□□□ 0.26
SS18-208ENST00000577751 E2F6O75461 281 aa16.65■□□□□ 0.26
SS18-208ENST00000577751 TIPRLO75663 272 aa16.65■□□□□ 0.26
SS18-208ENST00000577751 SOX14O95416 240 aa16.65■□□□□ 0.26
SS18-208ENST00000577751 GAAP10253 952 aa16.65■□□□□ 0.26
SS18-208ENST00000577751 STOMP27105 288 aa16.65■□□□□ 0.26
SS18-208ENST00000577751 PCSK6P29122 969 aa16.65■□□□□ 0.26
SS18-208ENST00000577751 APLNRP35414 380 aa16.65■□□□□ 0.26
SS18-208ENST00000577751 DNM1P46Q6ZS02 220 aa16.65■□□□□ 0.26
SS18-208ENST00000577751 ALDH16A1Q8IZ83 802 aa16.65■□□□□ 0.26
SS18-208ENST00000577751 HS3ST5Q8IZT8 346 aa16.65■□□□□ 0.26
SS18-208ENST00000577751 C11orf40Q8WZ69 217 aa16.65■□□□□ 0.26
SS18-208ENST00000577751 NRBF2Q96F24 287 aa16.65■□□□□ 0.26
SS18-208ENST00000577751 Q96MF0 132 aa16.65■□□□□ 0.26
SS18-208ENST00000577751 CDH20Q9HBT6 801 aa16.65■□□□□ 0.26
SS18-208ENST00000577751 BARX1Q9HBU1 254 aaPredicted RBP16.65■□□□□ 0.26
SS18-208ENST00000577751 RPRD1BQ9NQG5 326 aaKnown RBP16.65■□□□□ 0.26
SS18-208ENST00000577751 TBC1D23Q9NUY8 699 aa16.65■□□□□ 0.26
SS18-208ENST00000577751 CMAHPQ9Y471 501 aa16.65■□□□□ 0.26
SS18-208ENST00000577751 FKBP7Q9Y680 259 aa16.65■□□□□ 0.26
SS18-208ENST00000577751 EBAG9O00559 213 aa16.64■□□□□ 0.25
SS18-208ENST00000577751 PRKACGP22612 351 aa16.64■□□□□ 0.25
SS18-208ENST00000577751 EVX1P49640 407 aa16.64■□□□□ 0.25
SS18-208ENST00000577751 UCP2P55851 309 aa16.64■□□□□ 0.25
SS18-208ENST00000577751 RPS23P62266 143 aaKnown RBP16.64■□□□□ 0.25
SS18-208ENST00000577751 SNRPD2P62316 118 aaKnown RBP16.64■□□□□ 0.25
SS18-208ENST00000577751 DBPQ10586 325 aaPredicted RBP16.64■□□□□ 0.25
SS18-208ENST00000577751 AQP6Q13520 282 aa16.64■□□□□ 0.25
SS18-208ENST00000577751 RAB35Q15286 201 aa16.64■□□□□ 0.25
SS18-208ENST00000577751 ZNF774Q6NX45 483 aa16.64■□□□□ 0.25
SS18-208ENST00000577751 SHQ1Q6PI26 577 aaKnown RBP16.64■□□□□ 0.25
SS18-208ENST00000577751 OR2T33Q8NG76 320 aa16.64■□□□□ 0.25
SS18-208ENST00000577751 MRPL24Q96A35 216 aaKnown RBP16.64■□□□□ 0.25
SS18-208ENST00000577751 FBXO9Q9UK97 447 aaPredicted RBP16.64■□□□□ 0.25
SS18-208ENST00000577751 ICMTO60725 284 aa16.63■□□□□ 0.25
SS18-208ENST00000577751 GPANK1O95872 356 aa16.63■□□□□ 0.25
SS18-208ENST00000577751 COX5BP10606 129 aa16.63■□□□□ 0.25
SS18-208ENST00000577751 ANXA8P13928 327 aa16.63■□□□□ 0.25
SS18-208ENST00000577751 FOSL1P15407 271 aa16.63■□□□□ 0.25
SS18-208ENST00000577751 ARHGDIAP52565 204 aa16.63■□□□□ 0.25
SS18-208ENST00000577751 GLO1Q04760 184 aa16.63■□□□□ 0.25
SS18-208ENST00000577751 SCRN3Q0VDG4 424 aa16.63■□□□□ 0.25
SS18-208ENST00000577751 SLC36A3Q495N2 470 aa16.63■□□□□ 0.25
SS18-208ENST00000577751 OTPQ5XKR4 325 aa16.63■□□□□ 0.25
SS18-208ENST00000577751 SLC37A3Q8NCC5 494 aa16.63■□□□□ 0.25
SS18-208ENST00000577751 SLC26A10Q8NG04 563 aa16.63■□□□□ 0.25
SS18-208ENST00000577751 MRPL37Q9BZE1 423 aaKnown RBP16.63■□□□□ 0.25
SS18-208ENST00000577751 FN3KQ9H479 309 aa16.63■□□□□ 0.25
SS18-208ENST00000577751 ASH2LQ9UBL3 628 aa16.63■□□□□ 0.25
SS18-208ENST00000577751 AP4S1Q9Y587 144 aa16.63■□□□□ 0.25
SS18-208ENST00000577751 TFP02787 698 aa16.62■□□□□ 0.25
SS18-208ENST00000577751 FAM157BP0CG42 384 aa16.62■□□□□ 0.25
SS18-208ENST00000577751 RAD52P43351 418 aa16.62■□□□□ 0.25
SS18-208ENST00000577751 PPOXP50336 477 aa16.62■□□□□ 0.25
SS18-208ENST00000577751 GDI2P50395 445 aaKnown RBP16.62■□□□□ 0.25
SS18-208ENST00000577751 HIST1H3AP68431 136 aa16.62■□□□□ 0.25
SS18-208ENST00000577751 ATP6AP1Q15904 470 aa16.62■□□□□ 0.25
SS18-208ENST00000577751 CLEC12BQ2HXU8 276 aa16.62■□□□□ 0.25
SS18-208ENST00000577751 HIST2H3PS2Q5TEC6 136 aa16.62■□□□□ 0.25
SS18-208ENST00000577751 HIST2H3AQ71DI3 136 aa16.62■□□□□ 0.25
SS18-208ENST00000577751 SVOPLQ8N434 492 aa16.62■□□□□ 0.25
SS18-208ENST00000577751 CYB561A3Q8NBI2 242 aa16.62■□□□□ 0.25
SS18-208ENST00000577751 BDH2Q9BUT1 245 aa16.62■□□□□ 0.25
SS18-208ENST00000577751 RBM4Q9BWF3 364 aaKnown RBP16.62■□□□□ 0.25
SS18-208ENST00000577751 BCL2L14Q9BZR8 327 aa16.62■□□□□ 0.25
SS18-208ENST00000577751 ZNF556Q9HAH1 456 aa16.62■□□□□ 0.25
SS18-208ENST00000577751 KLHL21Q9UJP4 597 aa16.62■□□□□ 0.25
SS18-208ENST00000577751 C5orf49A4QMS7 147 aa16.61■□□□□ 0.25
SS18-208ENST00000577751 H3BN98 237 aa16.61■□□□□ 0.25
SS18-208ENST00000577751 SGCEO43556 437 aa16.61■□□□□ 0.25
SS18-208ENST00000577751 CIB2O75838 187 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms