RNA–Protein interactions for RNA: ENST00000577468.2

PTPRM-204, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-204ENST00000577468 A0A1W2PRF3 423 aa2.71□□□□□ -1.98
PTPRM-204ENST00000577468 A0A1W2PRM7 423 aa2.71□□□□□ -1.98
PTPRM-204ENST00000577468 IGSF23A1L1A6 192 aa2.71□□□□□ -1.98
PTPRM-204ENST00000577468 FAM90A10PA6NDY2 464 aa2.71□□□□□ -1.98
PTPRM-204ENST00000577468 PRORSD1PA6NEY8 169 aa2.71□□□□□ -1.98
PTPRM-204ENST00000577468 OR5H14A6NHG9 310 aa2.71□□□□□ -1.98
PTPRM-204ENST00000577468 MYMKA6NI61 221 aa2.71□□□□□ -1.98
PTPRM-204ENST00000577468 SHISA7A6NL88 538 aa2.71□□□□□ -1.98
PTPRM-204ENST00000577468 A6NNC1 897 aa2.71□□□□□ -1.98
PTPRM-204ENST00000577468 C1orf196B1AJZ1 125 aa2.71□□□□□ -1.98
PTPRM-204ENST00000577468 C21orf140B9A014 251 aa2.71□□□□□ -1.98
PTPRM-204ENST00000577468 FTCDNL1E5RQL4 147 aa2.71□□□□□ -1.98
PTPRM-204ENST00000577468 F5H768 121 aa2.71□□□□□ -1.98
PTPRM-204ENST00000577468 F6UZH7 168 aa2.71□□□□□ -1.98
PTPRM-204ENST00000577468 H0YGN5 161 aa2.71□□□□□ -1.98
PTPRM-204ENST00000577468 BLOC1S5-TXNDC5H3BN57 136 aa2.71□□□□□ -1.98
PTPRM-204ENST00000577468 FAAHO00519 579 aa2.71□□□□□ -1.98
PTPRM-204ENST00000577468 PTGESO14684 152 aa2.71□□□□□ -1.98
PTPRM-204ENST00000577468 CASKO14936 926 aa2.71□□□□□ -1.98
PTPRM-204ENST00000577468 EPHB6O15197 1021 aa2.71□□□□□ -1.98
PTPRM-204ENST00000577468 SLC16A5O15375 505 aa2.71□□□□□ -1.98
PTPRM-204ENST00000577468 GYG2O15488 501 aa2.71□□□□□ -1.98
PTPRM-204ENST00000577468 CDC40O60508 579 aaKnown RBP eCLIP2.71□□□□□ -1.98
PTPRM-204ENST00000577468 CTSVO60911 334 aa2.71□□□□□ -1.98
PTPRM-204ENST00000577468 LYPLA1O75608 230 aaPredicted RBP2.71□□□□□ -1.98
PTPRM-204ENST00000577468 SYNGR4O95473 234 aa2.71□□□□□ -1.98
PTPRM-204ENST00000577468 NFATC1O95644 943 aa2.71□□□□□ -1.98
PTPRM-204ENST00000577468 HPP00738 406 aa2.71□□□□□ -1.98
PTPRM-204ENST00000577468 HPRP00739 348 aa2.71□□□□□ -1.98
PTPRM-204ENST00000577468 IFNA1P01562 189 aa2.71□□□□□ -1.98
PTPRM-204ENST00000577468 CD74P04233 296 aa2.71□□□□□ -1.98
PTPRM-204ENST00000577468 IFNW1P05000 195 aa2.71□□□□□ -1.98
PTPRM-204ENST00000577468 SERPINA7P05543 415 aa2.71□□□□□ -1.98
PTPRM-204ENST00000577468 SFTPBP07988 381 aa2.71□□□□□ -1.98
PTPRM-204ENST00000577468 RHOCP08134 193 aa2.71□□□□□ -1.98
PTPRM-204ENST00000577468 SLC35G4P0C7Q5 338 aa2.71□□□□□ -1.98
PTPRM-204ENST00000577468 HIST1H1EP10412 219 aaKnown RBP2.71□□□□□ -1.98
PTPRM-204ENST00000577468 IRF1P10914 325 aa2.71□□□□□ -1.98
PTPRM-204ENST00000577468 MYL2P10916 166 aa2.71□□□□□ -1.98
PTPRM-204ENST00000577468 UGT2B7P16662 529 aa2.71□□□□□ -1.98
PTPRM-204ENST00000577468 CD72P21854 359 aa2.71□□□□□ -1.98
PTPRM-204ENST00000577468 CBLP22681 906 aa2.71□□□□□ -1.98
PTPRM-204ENST00000577468 DUSP1P28562 367 aa2.71□□□□□ -1.98
PTPRM-204ENST00000577468 HTR1FP30939 366 aa2.71□□□□□ -1.98
PTPRM-204ENST00000577468 SPRP35270 261 aaPredicted RBP2.71□□□□□ -1.98
PTPRM-204ENST00000577468 TNFRSF4P43489 277 aa2.71□□□□□ -1.98
PTPRM-204ENST00000577468 GYG1P46976 350 aa2.71□□□□□ -1.98
PTPRM-204ENST00000577468 LGALS7P47929 136 aa2.71□□□□□ -1.98
PTPRM-204ENST00000577468 SLC6A8P48029 635 aa2.71□□□□□ -1.98
PTPRM-204ENST00000577468 DNASE1L1P49184 302 aa2.71□□□□□ -1.98
PTPRM-204ENST00000577468 AGTR2P50052 363 aa2.71□□□□□ -1.98
PTPRM-204ENST00000577468 ASCL1P50553 236 aa2.71□□□□□ -1.98
PTPRM-204ENST00000577468 RAB5CP51148 216 aa2.71□□□□□ -1.98
PTPRM-204ENST00000577468 DAP3P51398 398 aaKnown RBP2.71□□□□□ -1.98
PTPRM-204ENST00000577468 ATP1B3P54709 279 aa2.71□□□□□ -1.98
PTPRM-204ENST00000577468 CDH12P55289 794 aa2.71□□□□□ -1.98
PTPRM-204ENST00000577468 BIDP55957 195 aa2.71□□□□□ -1.98
PTPRM-204ENST00000577468 RAB25P57735 213 aa2.71□□□□□ -1.98
PTPRM-204ENST00000577468 NXPH1P58417 271 aa2.71□□□□□ -1.98
PTPRM-204ENST00000577468 TAS2R38P59533 333 aa2.71□□□□□ -1.98
PTPRM-204ENST00000577468 RHOAP61586 193 aa2.71□□□□□ -1.98
PTPRM-204ENST00000577468 TBPL1P62380 186 aa2.71□□□□□ -1.98
PTPRM-204ENST00000577468 MRPS34P82930 218 aaKnown RBP2.71□□□□□ -1.98
PTPRM-204ENST00000577468 C2orf80Q0P641 193 aa2.71□□□□□ -1.98
PTPRM-204ENST00000577468 NME3Q13232 169 aa2.71□□□□□ -1.98
PTPRM-204ENST00000577468 MAD2L1Q13257 205 aaPredicted RBP2.71□□□□□ -1.98
PTPRM-204ENST00000577468 FASTKQ14296 549 aaKnown RBP2.71□□□□□ -1.98
PTPRM-204ENST00000577468 SYPL1Q16563 259 aa2.71□□□□□ -1.98
PTPRM-204ENST00000577468 ODF4Q2M2E3 257 aa2.71□□□□□ -1.98
PTPRM-204ENST00000577468 HLA-BQ31612 363 aa2.71□□□□□ -1.98
PTPRM-204ENST00000577468 ZNF750Q32MQ0 723 aa2.71□□□□□ -1.98
PTPRM-204ENST00000577468 PLPPR5Q32ZL2 321 aa2.71□□□□□ -1.98
PTPRM-204ENST00000577468 MIDNQ504T8 468 aa2.71□□□□□ -1.98
PTPRM-204ENST00000577468 RFTN2Q52LD8 501 aaPredicted RBP2.71□□□□□ -1.98
PTPRM-204ENST00000577468 ZNF585BQ52M93 769 aa2.71□□□□□ -1.98
PTPRM-204ENST00000577468 CARD16Q5EG05 197 aa2.71□□□□□ -1.98
PTPRM-204ENST00000577468 OTUD3Q5T2D3 398 aaPredicted RBP2.71□□□□□ -1.98
PTPRM-204ENST00000577468 GPRC6AQ5T6X5 926 aa2.71□□□□□ -1.98
PTPRM-204ENST00000577468 FAM78BQ5VT40 261 aa2.71□□□□□ -1.98
PTPRM-204ENST00000577468 OTUD1Q5VV17 481 aaPredicted RBP2.71□□□□□ -1.98
PTPRM-204ENST00000577468 LIPKQ5VXJ0 399 aa2.71□□□□□ -1.98
PTPRM-204ENST00000577468 STUMQ69YW2 141 aa2.71□□□□□ -1.98
PTPRM-204ENST00000577468 CES5AQ6NT32 575 aa2.71□□□□□ -1.98
PTPRM-204ENST00000577468 STEAP1BQ6NZ63 245 aa2.71□□□□□ -1.98
PTPRM-204ENST00000577468 CD200R1LQ6Q8B3 271 aa2.71□□□□□ -1.98
PTPRM-204ENST00000577468 UNQ9370/PRO34162Q6UXP9 181 aa2.71□□□□□ -1.98
PTPRM-204ENST00000577468 LIN28BQ6ZN17 250 aaKnown RBP eCLIP2.71□□□□□ -1.98
PTPRM-204ENST00000577468 RNF165Q6ZSG1 346 aa2.71□□□□□ -1.98
PTPRM-204ENST00000577468 TMPPEQ6ZT21 453 aa2.71□□□□□ -1.98
PTPRM-204ENST00000577468 WDR53Q7Z5U6 358 aaPredicted RBP2.71□□□□□ -1.98
PTPRM-204ENST00000577468 ZC3HC1Q86WB0 502 aaKnown RBP2.71□□□□□ -1.98
PTPRM-204ENST00000577468 TMEM173Q86WV6 379 aaPredicted RBP2.71□□□□□ -1.98
PTPRM-204ENST00000577468 NIT1Q86X76 327 aa2.71□□□□□ -1.98
PTPRM-204ENST00000577468 CATSPER3Q86XQ3 398 aa2.71□□□□□ -1.98
PTPRM-204ENST00000577468 TMEM25Q86YD3 366 aa2.71□□□□□ -1.98
PTPRM-204ENST00000577468 FGFRL1Q8N441 504 aa2.71□□□□□ -1.98
PTPRM-204ENST00000577468 METTL13Q8N6R0 699 aa2.71□□□□□ -1.98
PTPRM-204ENST00000577468 SMRP1Q8NCR6 262 aa2.71□□□□□ -1.98
PTPRM-204ENST00000577468 ST6GALNAC3Q8NDV1 305 aa2.71□□□□□ -1.98
PTPRM-204ENST00000577468 REPS2Q8NFH8 660 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms