RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 COMTD1Q86VU5 262 aa16.27■□□□□ 0.19
ATPAF1-214ENST00000576409 DND1Q8IYX4 353 aaKnown RBP16.27■□□□□ 0.19
ATPAF1-214ENST00000576409 IL1F10Q8WWZ1 152 aa16.27■□□□□ 0.19
ATPAF1-214ENST00000576409 NKX2-4Q9H2Z4 354 aa16.27■□□□□ 0.19
ATPAF1-214ENST00000576409 BRINP1O60477 761 aa16.27■□□□□ 0.19
ATPAF1-214ENST00000576409 CBX7O95931 251 aa16.27■□□□□ 0.19
ATPAF1-214ENST00000576409 SDHAP31040 664 aa16.27■□□□□ 0.19
ATPAF1-214ENST00000576409 ACSM1Q08AH1 577 aa16.27■□□□□ 0.19
ATPAF1-214ENST00000576409 CLPPQ16740 277 aaPredicted RBP16.27■□□□□ 0.19
ATPAF1-214ENST00000576409 TCTN1Q2MV58 587 aa16.27■□□□□ 0.19
ATPAF1-214ENST00000576409 PRTGQ2VWP7 1150 aa16.27■□□□□ 0.19
ATPAF1-214ENST00000576409 Q5BKY6 102 aa16.27■□□□□ 0.19
ATPAF1-214ENST00000576409 AKR1C8PQ5T2L2 129 aa16.27■□□□□ 0.19
ATPAF1-214ENST00000576409 RAB11FIP2Q7L804 512 aa16.27■□□□□ 0.19
ATPAF1-214ENST00000576409 FAM160A2Q8N612 972 aaPredicted RBP16.27■□□□□ 0.19
ATPAF1-214ENST00000576409 NICN1Q9BSH3 213 aa16.27■□□□□ 0.19
ATPAF1-214ENST00000576409 LINC01553A4QN01 128 aa16.26■□□□□ 0.19
ATPAF1-214ENST00000576409 A6NIZ1 184 aa16.26■□□□□ 0.19
ATPAF1-214ENST00000576409 TP53I11O14683 189 aa16.26■□□□□ 0.19
ATPAF1-214ENST00000576409 OIP5O43482 229 aa16.26■□□□□ 0.19
ATPAF1-214ENST00000576409 IFNA5P01569 189 aa16.26■□□□□ 0.19
ATPAF1-214ENST00000576409 RPA2P15927 270 aa16.26■□□□□ 0.19
ATPAF1-214ENST00000576409 RAP1BP61224 184 aa16.26■□□□□ 0.19
ATPAF1-214ENST00000576409 HNRNPKP61978 463 aaKnown RBP eCLIP16.26■□□□□ 0.19
ATPAF1-214ENST00000576409 RAP1AP62834 184 aa16.26■□□□□ 0.19
ATPAF1-214ENST00000576409 EEF1A2Q05639 463 aaKnown RBP16.26■□□□□ 0.19
ATPAF1-214ENST00000576409 DLX2Q07687 328 aaPredicted RBP16.26■□□□□ 0.19
ATPAF1-214ENST00000576409 ZNF770Q6IQ21 691 aaPredicted RBP16.26■□□□□ 0.19
ATPAF1-214ENST00000576409 TMEM71Q6P5X7 295 aa16.26■□□□□ 0.19
ATPAF1-214ENST00000576409 SEZ6L2Q6UXD5 910 aa16.26■□□□□ 0.19
ATPAF1-214ENST00000576409 PLXDC1Q8IUK5 500 aa16.26■□□□□ 0.19
ATPAF1-214ENST00000576409 TMEM217Q8N7C4 229 aa16.26■□□□□ 0.19
ATPAF1-214ENST00000576409 SYT3Q9BQG1 590 aa16.26■□□□□ 0.19
ATPAF1-214ENST00000576409 TRAF4Q9BUZ4 470 aaPredicted RBP16.26■□□□□ 0.19
ATPAF1-214ENST00000576409 TRAV36DV7A0A075B6V5 113 aa16.26■□□□□ 0.19
ATPAF1-214ENST00000576409 FAM221AA4D161 298 aa16.26■□□□□ 0.19
ATPAF1-214ENST00000576409 OR13C7P0DN81 318 aa16.26■□□□□ 0.19
ATPAF1-214ENST00000576409 HRH1P35367 487 aa16.26■□□□□ 0.19
ATPAF1-214ENST00000576409 ARF1P84077 181 aaKnown RBP16.26■□□□□ 0.19
ATPAF1-214ENST00000576409 SLC35D3Q5M8T2 416 aa16.26■□□□□ 0.19
ATPAF1-214ENST00000576409 AGBL4Q5VU57 503 aa16.26■□□□□ 0.19
ATPAF1-214ENST00000576409 FANCFQ9NPI8 374 aa16.26■□□□□ 0.19
ATPAF1-214ENST00000576409 LSM2Q9Y333 95 aaKnown RBP16.26■□□□□ 0.19
ATPAF1-214ENST00000576409 CFDP00746 253 aaPredicted RBP16.26■□□□□ 0.19
ATPAF1-214ENST00000576409 CT62P0C5K7 136 aa16.26■□□□□ 0.19
ATPAF1-214ENST00000576409 CPT2P23786 658 aa16.26■□□□□ 0.19
ATPAF1-214ENST00000576409 ALDH3B1P43353 468 aa16.26■□□□□ 0.19
ATPAF1-214ENST00000576409 CSNK1EP49674 416 aaKnown RBP16.26■□□□□ 0.19
ATPAF1-214ENST00000576409 RPS18P62269 152 aaKnown RBP16.26■□□□□ 0.19
ATPAF1-214ENST00000576409 PDZD11Q5EBL8 140 aa16.26■□□□□ 0.19
ATPAF1-214ENST00000576409 AVPI1Q5T686 147 aa16.26■□□□□ 0.19
ATPAF1-214ENST00000576409 ZNF695Q8IW36 515 aa16.26■□□□□ 0.19
ATPAF1-214ENST00000576409 PRAMEF27A3QJZ7 478 aa16.25■□□□□ 0.19
ATPAF1-214ENST00000576409 IMPA2O14732 288 aa16.25■□□□□ 0.19
ATPAF1-214ENST00000576409 LILRB3O75022 631 aa16.25■□□□□ 0.19
ATPAF1-214ENST00000576409 C1orf140Q5VVS0 124 aa16.25■□□□□ 0.19
ATPAF1-214ENST00000576409 EID2Q8N6I1 236 aa16.25■□□□□ 0.19
ATPAF1-214ENST00000576409 OR51E1Q8TCB6 317 aa16.25■□□□□ 0.19
ATPAF1-214ENST00000576409 WWTR1Q9GZV5 400 aa16.25■□□□□ 0.19
ATPAF1-214ENST00000576409 FKRPQ9H9S5 495 aa16.25■□□□□ 0.19
ATPAF1-214ENST00000576409 LRFN1Q9P244 771 aa16.25■□□□□ 0.19
ATPAF1-214ENST00000576409 TRIOBPQ9H2D6 2365 aa16.25■□□□□ 0.19
ATPAF1-214ENST00000576409 BET1O15155 118 aa16.25■□□□□ 0.19
ATPAF1-214ENST00000576409 MTCP1P56278 107 aa16.25■□□□□ 0.19
ATPAF1-214ENST00000576409 ZNF85Q03923 595 aa16.25■□□□□ 0.19
ATPAF1-214ENST00000576409 VN1R4Q7Z5H5 301 aa16.25■□□□□ 0.19
ATPAF1-214ENST00000576409 OR10AC1Q8NH08 325 aa16.25■□□□□ 0.19
ATPAF1-214ENST00000576409 KTI12Q96EK9 354 aaPredicted RBP16.25■□□□□ 0.19
ATPAF1-214ENST00000576409 C12orf57Q99622 126 aa16.25■□□□□ 0.19
ATPAF1-214ENST00000576409 GAREM1Q9H706 876 aa16.25■□□□□ 0.19
ATPAF1-214ENST00000576409 PURGQ9UJV8 347 aaKnown RBP16.25■□□□□ 0.19
ATPAF1-214ENST00000576409 TRAV1-2A0A0B4J238 106 aa16.25■□□□□ 0.19
ATPAF1-214ENST00000576409 CD1CP29017 333 aa16.25■□□□□ 0.19
ATPAF1-214ENST00000576409 MRM1Q6IN84 353 aaKnown RBP16.25■□□□□ 0.19
ATPAF1-214ENST00000576409 CBLN3Q6UW01 205 aa16.25■□□□□ 0.19
ATPAF1-214ENST00000576409 TMPRSS11FQ6ZWK6 438 aa16.25■□□□□ 0.19
ATPAF1-214ENST00000576409 CDH26Q8IXH8 852 aa16.25■□□□□ 0.19
ATPAF1-214ENST00000576409 ARIH2OSQ8N7S6 290 aa16.25■□□□□ 0.19
ATPAF1-214ENST00000576409 C19orf43Q9BQ61 176 aa16.25■□□□□ 0.19
ATPAF1-214ENST00000576409 MRPS17Q9Y2R5 130 aaKnown RBP16.25■□□□□ 0.19
ATPAF1-214ENST00000576409 NCOR1O75376 2440 aa16.25■□□□□ 0.19
ATPAF1-214ENST00000576409 A0A087WV62 115 aa16.24■□□□□ 0.19
ATPAF1-214ENST00000576409 MCRIP1C9JLW8 97 aa16.24■□□□□ 0.19
ATPAF1-214ENST00000576409 TXNDC12O95881 172 aa16.24■□□□□ 0.19
ATPAF1-214ENST00000576409 ITGB2P05107 769 aa16.24■□□□□ 0.19
ATPAF1-214ENST00000576409 TMIGD3P0DMS9 266 aaPredicted RBP16.24■□□□□ 0.19
ATPAF1-214ENST00000576409 OPRM1P35372 400 aa16.24■□□□□ 0.19
ATPAF1-214ENST00000576409 CDKN2AP42771 156 aaKnown RBP16.24■□□□□ 0.19
ATPAF1-214ENST00000576409 PPP1CAP62136 330 aa16.24■□□□□ 0.19
ATPAF1-214ENST00000576409 S100A12P80511 92 aa16.24■□□□□ 0.19
ATPAF1-214ENST00000576409 TUSC1Q2TAM9 212 aa16.24■□□□□ 0.19
ATPAF1-214ENST00000576409 CD300LDQ6UXZ3 194 aa16.24■□□□□ 0.19
ATPAF1-214ENST00000576409 FBXW12Q6X9E4 464 aa16.24■□□□□ 0.19
ATPAF1-214ENST00000576409 RFLNBQ8N5W9 214 aa16.24■□□□□ 0.19
ATPAF1-214ENST00000576409 SUMF2Q8NBJ7 301 aa16.24■□□□□ 0.19
ATPAF1-214ENST00000576409 PNPLA2Q96AD5 504 aa16.24■□□□□ 0.19
ATPAF1-214ENST00000576409 ZNF75AQ96N20 296 aa16.24■□□□□ 0.19
ATPAF1-214ENST00000576409 CMSS1Q9BQ75 279 aaKnown RBP16.24■□□□□ 0.19
ATPAF1-214ENST00000576409 CNTNAP3Q9BZ76 1288 aa16.24■□□□□ 0.19
ATPAF1-214ENST00000576409 FBXO7Q9Y3I1 522 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 117.9 ms