RNA–Protein interactions for RNA: ENST00000574867.5

NUP88-210, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 2,081 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-210ENST00000574867 ZNF503-AS2A6NEH8 195 aa14.91□□□□□ -0.02
NUP88-210ENST00000574867 CCDC182A6NF36 153 aa14.91□□□□□ -0.02
NUP88-210ENST00000574867 CASKO14936 926 aa14.91□□□□□ -0.02
NUP88-210ENST00000574867 RAB36O95755 333 aa14.91□□□□□ -0.02
NUP88-210ENST00000574867 CLIC3O95833 236 aa14.91□□□□□ -0.02
NUP88-210ENST00000574867 ADAM8P78325 824 aa14.91□□□□□ -0.02
NUP88-210ENST00000574867 SCRN3Q0VDG4 424 aa14.91□□□□□ -0.02
NUP88-210ENST00000574867 C3orf36Q3SXR2 165 aa14.91□□□□□ -0.02
NUP88-210ENST00000574867 UGT2A3Q6UWM9 527 aa14.91□□□□□ -0.02
NUP88-210ENST00000574867 SEZ6L2Q6UXD5 910 aa14.91□□□□□ -0.02
NUP88-210ENST00000574867 USP51Q70EK9 711 aa14.91□□□□□ -0.02
NUP88-210ENST00000574867 BCDIN3DQ7Z5W3 292 aaKnown RBP14.91□□□□□ -0.02
NUP88-210ENST00000574867 WFDC8Q8IUA0 241 aa14.91□□□□□ -0.02
NUP88-210ENST00000574867 UBE2FQ969M7 185 aa14.91□□□□□ -0.02
NUP88-210ENST00000574867 FBXO17Q96EF6 278 aa14.91□□□□□ -0.02
NUP88-210ENST00000574867 TEAD3Q99594 435 aa14.91□□□□□ -0.02
NUP88-210ENST00000574867 DNAJC27Q9NZQ0 273 aa14.91□□□□□ -0.02
NUP88-210ENST00000574867 CRNNQ9UBG3 495 aaPredicted RBP14.91□□□□□ -0.02
NUP88-210ENST00000574867 KCNN3Q9UGI6 736 aa14.91□□□□□ -0.02
NUP88-210ENST00000574867 WARS2Q9UGM6 360 aaKnown RBP14.91□□□□□ -0.02
NUP88-210ENST00000574867 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.91□□□□□ -0.02
NUP88-210ENST00000574867 ADGRG4Q8IZF6 3080 aa14.9□□□□□ -0.02
NUP88-210ENST00000574867 COL12A1Q99715 3063 aa14.9□□□□□ -0.02
NUP88-210ENST00000574867 DOPEY2Q9Y3R5 2298 aa14.9□□□□□ -0.02
NUP88-210ENST00000574867 TVP23AA6NH52 213 aa14.9□□□□□ -0.02
NUP88-210ENST00000574867 IGKV3-15P01624 115 aa14.9□□□□□ -0.02
NUP88-210ENST00000574867 MMP7P09237 267 aaPredicted RBP14.9□□□□□ -0.02
NUP88-210ENST00000574867 CBR1P16152 277 aa14.9□□□□□ -0.02
NUP88-210ENST00000574867 CRYGSP22914 178 aa14.9□□□□□ -0.02
NUP88-210ENST00000574867 HTR1FP30939 366 aa14.9□□□□□ -0.02
NUP88-210ENST00000574867 ENTPD1P49961 510 aa14.9□□□□□ -0.02
NUP88-210ENST00000574867 RAB1AP62820 205 aa14.9□□□□□ -0.02
NUP88-210ENST00000574867 TUBA1BP68363 451 aa14.9□□□□□ -0.02
NUP88-210ENST00000574867 TUBA4AP68366 448 aa14.9□□□□□ -0.02
NUP88-210ENST00000574867 GGTLC2Q14390 218 aa14.9□□□□□ -0.02
NUP88-210ENST00000574867 MEP1BQ16820 701 aa14.9□□□□□ -0.02
NUP88-210ENST00000574867 C6orf52Q5T4I8 152 aa14.9□□□□□ -0.02
NUP88-210ENST00000574867 TUBA1AQ71U36 451 aa14.9□□□□□ -0.02
NUP88-210ENST00000574867 MDP1Q86V88 176 aa14.9□□□□□ -0.02
NUP88-210ENST00000574867 ZMYND19Q96E35 227 aaPredicted RBP14.9□□□□□ -0.02
NUP88-210ENST00000574867 INTS14Q96SY0 518 aa14.9□□□□□ -0.02
NUP88-210ENST00000574867 ZNF184Q99676 751 aaPredicted RBP14.9□□□□□ -0.02
NUP88-210ENST00000574867 CDADC1Q9BWV3 514 aa14.9□□□□□ -0.02
NUP88-210ENST00000574867 RNF121Q9H920 327 aa14.9□□□□□ -0.02
NUP88-210ENST00000574867 CLN6Q9NWW5 311 aa14.9□□□□□ -0.02
NUP88-210ENST00000574867 ASH2LQ9UBL3 628 aa14.9□□□□□ -0.02
NUP88-210ENST00000574867 PLEKHB1Q9UF11 243 aaPredicted RBP14.9□□□□□ -0.02
NUP88-210ENST00000574867 TMCC2O75069 709 aa14.89□□□□□ -0.03
NUP88-210ENST00000574867 GOSR1O95249 250 aa14.89□□□□□ -0.03
NUP88-210ENST00000574867 COX6B1P14854 86 aa14.89□□□□□ -0.03
NUP88-210ENST00000574867 ZNF32P17041 273 aa14.89□□□□□ -0.03
NUP88-210ENST00000574867 MAD2L1BPQ15013 274 aaPredicted RBP14.89□□□□□ -0.03
NUP88-210ENST00000574867 TEX30Q5JUR7 227 aa14.89□□□□□ -0.03
NUP88-210ENST00000574867 LYPD4Q6UWN0 246 aa14.89□□□□□ -0.03
NUP88-210ENST00000574867 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.89□□□□□ -0.03
NUP88-210ENST00000574867 ZNF511Q8NB15 262 aa14.89□□□□□ -0.03
NUP88-210ENST00000574867 HAO2Q9NYQ3 351 aa14.89□□□□□ -0.03
NUP88-210ENST00000574867 TIMM10BQ9Y5J6 103 aa14.89□□□□□ -0.03
NUP88-210ENST00000574867 ICE1Q9Y2F5 2266 aa14.89□□□□□ -0.03
NUP88-210ENST00000574867 GNAO1P09471 354 aa14.89□□□□□ -0.03
NUP88-210ENST00000574867 PIGFQ07326 219 aa14.89□□□□□ -0.03
NUP88-210ENST00000574867 POU4F2Q12837 409 aa14.89□□□□□ -0.03
NUP88-210ENST00000574867 PCK2Q16822 640 aa14.89□□□□□ -0.03
NUP88-210ENST00000574867 SP5Q6BEB4 398 aaPredicted RBP14.89□□□□□ -0.03
NUP88-210ENST00000574867 ALKBH2Q6NS38 261 aa14.89□□□□□ -0.03
NUP88-210ENST00000574867 ERI1Q8IV48 349 aaKnown RBP14.89□□□□□ -0.03
NUP88-210ENST00000574867 TIGD4Q8IY51 512 aa14.89□□□□□ -0.03
NUP88-210ENST00000574867 FGFBP3Q8TAT2 258 aa14.89□□□□□ -0.03
NUP88-210ENST00000574867 ANKRD60Q9BZ19 345 aa14.89□□□□□ -0.03
NUP88-210ENST00000574867 WDR76Q9H967 626 aa14.89□□□□□ -0.03
NUP88-210ENST00000574867 NOX3Q9HBY0 568 aa14.89□□□□□ -0.03
NUP88-210ENST00000574867 CYB5R1Q9UHQ9 305 aa14.89□□□□□ -0.03
NUP88-210ENST00000574867 RAB26Q9ULW5 256 aa14.89□□□□□ -0.03
NUP88-210ENST00000574867 LHFPL6Q9Y693 200 aa14.89□□□□□ -0.03
NUP88-210ENST00000574867 ENTPD6O75354 484 aa14.88□□□□□ -0.03
NUP88-210ENST00000574867 IGLV1-44P01699 117 aa14.88□□□□□ -0.03
NUP88-210ENST00000574867 PATE4P0C8F1 98 aa14.88□□□□□ -0.03
NUP88-210ENST00000574867 ISL1P61371 349 aa14.88□□□□□ -0.03
NUP88-210ENST00000574867 PLP2Q04941 152 aa14.88□□□□□ -0.03
NUP88-210ENST00000574867 BEX5Q5H9J7 111 aa14.88□□□□□ -0.03
NUP88-210ENST00000574867 TMEM108Q6UXF1 575 aa14.88□□□□□ -0.03
NUP88-210ENST00000574867 SHFQ7M4L6 423 aa14.88□□□□□ -0.03
NUP88-210ENST00000574867 GJC3Q8NFK1 279 aa14.88□□□□□ -0.03
NUP88-210ENST00000574867 OR2AJ1Q8NGZ0 328 aa14.88□□□□□ -0.03
NUP88-210ENST00000574867 CNN2Q99439 309 aaKnown RBP14.88□□□□□ -0.03
NUP88-210ENST00000574867 OR2H1Q9GZK4 316 aa14.88□□□□□ -0.03
NUP88-210ENST00000574867 C1orf198Q9H425 327 aa14.88□□□□□ -0.03
NUP88-210ENST00000574867 NPAP1Q9NZP6 1156 aa14.88□□□□□ -0.03
NUP88-210ENST00000574867 PTHP01270 115 aa14.88□□□□□ -0.03
NUP88-210ENST00000574867 SPARCP09486 303 aa14.88□□□□□ -0.03
NUP88-210ENST00000574867 ZNF83P51522 516 aa14.88□□□□□ -0.03
NUP88-210ENST00000574867 OR6N2Q8NGY6 317 aa14.88□□□□□ -0.03
NUP88-210ENST00000574867 APH1BQ8WW43 257 aa14.88□□□□□ -0.03
NUP88-210ENST00000574867 ESRP2Q9H6T0 727 aaKnown RBP14.88□□□□□ -0.03
NUP88-210ENST00000574867 ZNF593O00488 134 aaPredicted RBP14.87□□□□□ -0.03
NUP88-210ENST00000574867 ZNF14P17017 642 aaPredicted RBP14.87□□□□□ -0.03
NUP88-210ENST00000574867 IDH3GP51553 393 aaPredicted RBP14.87□□□□□ -0.03
NUP88-210ENST00000574867 NR1H2P55055 460 aa14.87□□□□□ -0.03
NUP88-210ENST00000574867 HIST1H3AP68431 136 aa14.87□□□□□ -0.03
NUP88-210ENST00000574867 DAZAP2Q15038 168 aaPredicted RBP14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms