RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 SLC7A6Q92536 515 aa12.54□□□□□ -0.4
VPS33B-208ENST00000574755 SLC25A44Q96H78 314 aaPredicted RBP12.54□□□□□ -0.4
VPS33B-208ENST00000574755 ST6GAL2Q96JF0 529 aa12.54□□□□□ -0.4
VPS33B-208ENST00000574755 AUNIPQ9H7T9 357 aa12.54□□□□□ -0.4
VPS33B-208ENST00000574755 NEK6Q9HC98 313 aa12.54□□□□□ -0.4
VPS33B-208ENST00000574755 CENPMQ9NSP4 180 aa12.54□□□□□ -0.4
VPS33B-208ENST00000574755 DDX28Q9NUL7 540 aaKnown RBP12.54□□□□□ -0.4
VPS33B-208ENST00000574755 RABL2AQ9UBK7 228 aaPredicted RBP12.54□□□□□ -0.4
VPS33B-208ENST00000574755 PISDQ9UG56 409 aa12.54□□□□□ -0.4
VPS33B-208ENST00000574755 RABL2BQ9UNT1 228 aa12.54□□□□□ -0.4
VPS33B-208ENST00000574755 R4GMQ9 66 aa12.54□□□□□ -0.4
VPS33B-208ENST00000574755 A0A1W2PPL8 197 aa12.53□□□□□ -0.4
VPS33B-208ENST00000574755 PMS2P1A4D2B8 440 aa12.53□□□□□ -0.4
VPS33B-208ENST00000574755 INMT-MINDY4F8WBC2 141 aa12.53□□□□□ -0.4
VPS33B-208ENST00000574755 EIF1AYO14602 144 aaKnown RBP12.53□□□□□ -0.4
VPS33B-208ENST00000574755 TRAF3IP2O43734 574 aaPredicted RBP12.53□□□□□ -0.4
VPS33B-208ENST00000574755 RAB40ALP0C0E4 278 aa12.53□□□□□ -0.4
VPS33B-208ENST00000574755 EIF1AXP47813 144 aaKnown RBP12.53□□□□□ -0.4
VPS33B-208ENST00000574755 ART1P52961 327 aa12.53□□□□□ -0.4
VPS33B-208ENST00000574755 RAB25P57735 213 aa12.53□□□□□ -0.4
VPS33B-208ENST00000574755 RAET1LQ5VY80 246 aa12.53□□□□□ -0.4
VPS33B-208ENST00000574755 C6orf15Q6UXA7 325 aaPredicted RBP12.53□□□□□ -0.4
VPS33B-208ENST00000574755 NHLRC1Q6VVB1 395 aa12.53□□□□□ -0.4
VPS33B-208ENST00000574755 GTPBP8Q8N3Z3 284 aaPredicted RBP12.53□□□□□ -0.4
VPS33B-208ENST00000574755 NOXO1Q8NFA2 376 aa12.53□□□□□ -0.4
VPS33B-208ENST00000574755 RAB40AQ8WXH6 277 aa12.53□□□□□ -0.4
VPS33B-208ENST00000574755 C11orf40Q8WZ69 217 aa12.53□□□□□ -0.4
VPS33B-208ENST00000574755 KLHL13Q9P2N7 655 aa12.53□□□□□ -0.4
VPS33B-208ENST00000574755 ETV7Q9Y603 341 aa12.53□□□□□ -0.4
VPS33B-208ENST00000574755 GSTZ1O43708 216 aaPredicted RBP12.52□□□□□ -0.4
VPS33B-208ENST00000574755 RAMP1O60894 148 aa12.52□□□□□ -0.4
VPS33B-208ENST00000574755 CD2P06729 351 aa12.52□□□□□ -0.4
VPS33B-208ENST00000574755 H2BFMP0C1H6 154 aa12.52□□□□□ -0.4
VPS33B-208ENST00000574755 JMJD7P0C870 316 aa12.52□□□□□ -0.4
VPS33B-208ENST00000574755 PGA4P0DJD7 388 aa12.52□□□□□ -0.4
VPS33B-208ENST00000574755 PGA3P0DJD8 388 aa12.52□□□□□ -0.4
VPS33B-208ENST00000574755 LIFP15018 202 aa12.52□□□□□ -0.4
VPS33B-208ENST00000574755 HLA-DMAP28067 261 aa12.52□□□□□ -0.4
VPS33B-208ENST00000574755 BTCP35070 178 aa12.52□□□□□ -0.4
VPS33B-208ENST00000574755 DSCR4P56555 118 aaPredicted RBP12.52□□□□□ -0.4
VPS33B-208ENST00000574755 PLA1AQ53H76 456 aa12.52□□□□□ -0.4
VPS33B-208ENST00000574755 TMEM69Q5SWH9 247 aa12.52□□□□□ -0.4
VPS33B-208ENST00000574755 CARD17Q5XLA6 110 aa12.52□□□□□ -0.4
VPS33B-208ENST00000574755 SIAH3Q8IW03 269 aa12.52□□□□□ -0.4
VPS33B-208ENST00000574755 ASB5Q8WWX0 329 aa12.52□□□□□ -0.4
VPS33B-208ENST00000574755 GCDHQ92947 438 aaPredicted RBP12.52□□□□□ -0.4
VPS33B-208ENST00000574755 MIB2Q96AX9 1013 aa12.52□□□□□ -0.4
VPS33B-208ENST00000574755 OXGR1Q96P68 337 aa12.52□□□□□ -0.4
VPS33B-208ENST00000574755 PROK2Q9HC23 129 aa12.52□□□□□ -0.4
VPS33B-208ENST00000574755 STEAP1Q9UHE8 339 aa12.52□□□□□ -0.4
VPS33B-208ENST00000574755 DKKL1Q9UK85 242 aa12.52□□□□□ -0.4
VPS33B-208ENST00000574755 TMEM269A0A1B0GVZ9 245 aa12.52□□□□□ -0.41
VPS33B-208ENST00000574755 A0A1W2PQ72 361 aa12.52□□□□□ -0.41
VPS33B-208ENST00000574755 DOK2O60496 412 aa12.52□□□□□ -0.41
VPS33B-208ENST00000574755 SRSF10O75494 262 aaKnown RBP12.52□□□□□ -0.41
VPS33B-208ENST00000574755 LAP3P28838 519 aa12.52□□□□□ -0.41
VPS33B-208ENST00000574755 CLDN6P56747 220 aa12.52□□□□□ -0.41
VPS33B-208ENST00000574755 SLC35A1P78382 337 aa12.52□□□□□ -0.41
VPS33B-208ENST00000574755 ZFP69Q49AA0 526 aa12.52□□□□□ -0.41
VPS33B-208ENST00000574755 DEGS2Q6QHC5 323 aa12.52□□□□□ -0.41
VPS33B-208ENST00000574755 TMPPEQ6ZT21 453 aa12.52□□□□□ -0.41
VPS33B-208ENST00000574755 TIPARPQ7Z3E1 657 aaKnown RBP12.52□□□□□ -0.41
VPS33B-208ENST00000574755 HDDC2Q7Z4H3 204 aa12.52□□□□□ -0.41
VPS33B-208ENST00000574755 PPP1R32Q7Z5V6 425 aa12.52□□□□□ -0.41
VPS33B-208ENST00000574755 HAVCR1Q96D42 359 aa12.52□□□□□ -0.41
VPS33B-208ENST00000574755 DMRTB1Q96MA1 342 aa12.52□□□□□ -0.41
VPS33B-208ENST00000574755 ZPBPQ9BS86 351 aa12.52□□□□□ -0.41
VPS33B-208ENST00000574755 BEX2Q9BXY8 128 aa12.52□□□□□ -0.41
VPS33B-208ENST00000574755 SEC61A2Q9H9S3 476 aa12.52□□□□□ -0.41
VPS33B-208ENST00000574755 SH2D2AQ9NP31 389 aa12.52□□□□□ -0.41
VPS33B-208ENST00000574755 CKLFQ9UBR5 152 aa12.52□□□□□ -0.41
VPS33B-208ENST00000574755 OR52A1Q9UKL2 312 aa12.52□□□□□ -0.41
VPS33B-208ENST00000574755 ARPC4-TTLL3A0A0A6YYG9 625 aa12.51□□□□□ -0.41
VPS33B-208ENST00000574755 AQP7P3A6NL99 342 aa12.51□□□□□ -0.41
VPS33B-208ENST00000574755 ARSBP15848 533 aa12.51□□□□□ -0.41
VPS33B-208ENST00000574755 KLK2P20151 261 aa12.51□□□□□ -0.41
VPS33B-208ENST00000574755 GDNFP39905 211 aa12.51□□□□□ -0.41
VPS33B-208ENST00000574755 ZNF468Q5VIY5 522 aaPredicted RBP12.51□□□□□ -0.41
VPS33B-208ENST00000574755 CT55Q8WUE5 264 aa12.51□□□□□ -0.41
VPS33B-208ENST00000574755 RNF133Q8WVZ7 376 aa12.51□□□□□ -0.41
VPS33B-208ENST00000574755 TAAR9Q96RI9 348 aa12.51□□□□□ -0.41
VPS33B-208ENST00000574755 DPAGT1Q9H3H5 408 aa12.51□□□□□ -0.41
VPS33B-208ENST00000574755 RANGRFQ9HD47 186 aaPredicted RBP12.51□□□□□ -0.41
VPS33B-208ENST00000574755 CYB5R1Q9UHQ9 305 aa12.51□□□□□ -0.41
VPS33B-208ENST00000574755 FOXJ3Q9UPW0 622 aa12.51□□□□□ -0.41
VPS33B-208ENST00000574755 PCDHGA5Q9Y5G8 931 aa12.51□□□□□ -0.41
VPS33B-208ENST00000574755 SDK2Q58EX2 2172 aa12.51□□□□□ -0.41
VPS33B-208ENST00000574755 ICAM2P13598 275 aa12.51□□□□□ -0.41
VPS33B-208ENST00000574755 CDK2P24941 298 aa12.51□□□□□ -0.41
VPS33B-208ENST00000574755 RPS15P62841 145 aaKnown RBP12.51□□□□□ -0.41
VPS33B-208ENST00000574755 CD83Q01151 205 aa12.51□□□□□ -0.41
VPS33B-208ENST00000574755 OR13C3Q8NGS6 347 aa12.51□□□□□ -0.41
VPS33B-208ENST00000574755 OR6X1Q8NH79 312 aa12.51□□□□□ -0.41
VPS33B-208ENST00000574755 SLAMF6Q96DU3 332 aa12.51□□□□□ -0.41
VPS33B-208ENST00000574755 C1orf198Q9H425 327 aa12.51□□□□□ -0.41
VPS33B-208ENST00000574755 MOV10Q9HCE1 1003 aaKnown RBP12.51□□□□□ -0.41
VPS33B-208ENST00000574755 G6PC2Q9NQR9 355 aa12.51□□□□□ -0.41
VPS33B-208ENST00000574755 NUDT15Q9NV35 164 aa12.51□□□□□ -0.41
VPS33B-208ENST00000574755 HHLA2Q9UM44 414 aa12.51□□□□□ -0.41
VPS33B-208ENST00000574755 POLR1DQ9Y2S0 133 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms