RNA–Protein interactions for RNA: ENST00000574095.1

NPLOC4-215, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 277 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-215ENST00000574095 NDEL1Q9GZM8 345 aa22.27■■□□□ 1.16
NPLOC4-215ENST00000574095 EMC7Q9NPA0 242 aa22.27■■□□□ 1.16
NPLOC4-215ENST00000574095 HINT3Q9NQE9 182 aaKnown RBP22.27■■□□□ 1.16
NPLOC4-215ENST00000574095 POLE4Q9NR33 117 aa22.27■■□□□ 1.16
NPLOC4-215ENST00000574095 SLCO1C1Q9NYB5 712 aa22.27■■□□□ 1.16
NPLOC4-215ENST00000574095 EIF3KQ9UBQ5 218 aaKnown RBP22.27■■□□□ 1.16
NPLOC4-215ENST00000574095 LPAR3Q9UBY5 353 aa22.27■■□□□ 1.16
NPLOC4-215ENST00000574095 CD300AQ9UGN4 299 aa22.27■■□□□ 1.16
NPLOC4-215ENST00000574095 TAGLN3Q9UI15 199 aa22.27■■□□□ 1.16
NPLOC4-215ENST00000574095 AURKCQ9UQB9 309 aa22.27■■□□□ 1.16
NPLOC4-215ENST00000574095 TEX13CA0A0J9YWL9 993 aa22.26■■□□□ 1.15
NPLOC4-215ENST00000574095 PRSS37A4D1T9 235 aa22.26■■□□□ 1.15
NPLOC4-215ENST00000574095 ACHEP22303 614 aa22.26■■□□□ 1.15
NPLOC4-215ENST00000574095 PCBD1P61457 104 aa22.26■■□□□ 1.15
NPLOC4-215ENST00000574095 TMEM154Q6P9G4 183 aa22.26■■□□□ 1.15
NPLOC4-215ENST00000574095 GTF3AQ92664 365 aaKnown RBP22.26■■□□□ 1.15
NPLOC4-215ENST00000574095 RSRC1Q96IZ7 334 aaKnown RBP22.26■■□□□ 1.15
NPLOC4-215ENST00000574095 LRRC37BQ96QE4 947 aa22.26■■□□□ 1.15
NPLOC4-215ENST00000574095 MAGEL2Q9UJ55 1249 aa22.26■■□□□ 1.15
NPLOC4-215ENST00000574095 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP22.26■■□□□ 1.154e-8■□□□□ 10.6
NPLOC4-215ENST00000574095 SVEP1Q4LDE5 3571 aa22.26■■□□□ 1.15
NPLOC4-215ENST00000574095 SEMG1P04279 462 aa22.25■■□□□ 1.15
NPLOC4-215ENST00000574095 GPR6P46095 362 aaPredicted RBP22.25■■□□□ 1.15
NPLOC4-215ENST00000574095 FXYD6P3P58550 94 aa22.25■■□□□ 1.15
NPLOC4-215ENST00000574095 CCL8P80075 99 aa22.25■■□□□ 1.15
NPLOC4-215ENST00000574095 KRR1Q13601 381 aaKnown RBP22.25■■□□□ 1.15
NPLOC4-215ENST00000574095 CCNIQ14094 377 aa22.25■■□□□ 1.15
NPLOC4-215ENST00000574095 SAMD4BQ5PRF9 694 aaKnown RBP22.25■■□□□ 1.15
NPLOC4-215ENST00000574095 FAM120AOSQ5T036 256 aa22.25■■□□□ 1.15
NPLOC4-215ENST00000574095 SLC25A40Q8TBP6 338 aa22.25■■□□□ 1.15
NPLOC4-215ENST00000574095 HPS1Q92902 700 aa22.25■■□□□ 1.15
NPLOC4-215ENST00000574095 DHRS1Q96LJ7 313 aa22.25■■□□□ 1.15
NPLOC4-215ENST00000574095 GPA33Q99795 319 aa22.25■■□□□ 1.15
NPLOC4-215ENST00000574095 FUZQ9BT04 418 aa22.25■■□□□ 1.15
NPLOC4-215ENST00000574095 NRIP3Q9NQ35 241 aa22.25■■□□□ 1.15
NPLOC4-215ENST00000574095 ZNF275Q9NSD4 429 aaPredicted RBP22.25■■□□□ 1.15
NPLOC4-215ENST00000574095 IER3IP1Q9Y5U9 82 aa22.25■■□□□ 1.15
NPLOC4-215ENST00000574095 UNC119BA6NIH7 251 aa22.24■■□□□ 1.15
NPLOC4-215ENST00000574095 C12orf71A8MTZ7 269 aa22.24■■□□□ 1.15
NPLOC4-215ENST00000574095 IMPA2O14732 288 aa22.24■■□□□ 1.15
NPLOC4-215ENST00000574095 AHCYL1O43865 530 aa22.24■■□□□ 1.15
NPLOC4-215ENST00000574095 IGHV3-13P01766 116 aa22.24■■□□□ 1.15
NPLOC4-215ENST00000574095 CTLA4P16410 223 aa22.24■■□□□ 1.15
NPLOC4-215ENST00000574095 ITGA2P17301 1181 aa22.24■■□□□ 1.15
NPLOC4-215ENST00000574095 SDHAP31040 664 aa22.24■■□□□ 1.15
NPLOC4-215ENST00000574095 MPV17P39210 176 aa22.24■■□□□ 1.15
NPLOC4-215ENST00000574095 ZNF718Q3SXZ3 478 aa22.24■■□□□ 1.15
NPLOC4-215ENST00000574095 OTPQ5XKR4 325 aa22.24■■□□□ 1.15
NPLOC4-215ENST00000574095 SYT9Q86SS6 491 aa22.24■■□□□ 1.15
NPLOC4-215ENST00000574095 ABHD4Q8TB40 342 aa22.24■■□□□ 1.15
NPLOC4-215ENST00000574095 MARS2Q96GW9 593 aaKnown RBP22.24■■□□□ 1.15
NPLOC4-215ENST00000574095 NSMCE2Q96MF7 247 aa22.24■■□□□ 1.15
NPLOC4-215ENST00000574095 RERGLQ9H628 205 aa22.24■■□□□ 1.15
NPLOC4-215ENST00000574095 NARFLQ9H6Q4 476 aa22.24■■□□□ 1.15
NPLOC4-215ENST00000574095 SOCS2O14508 198 aa22.23■■□□□ 1.15
NPLOC4-215ENST00000574095 ARPC2O15144 300 aa22.23■■□□□ 1.15
NPLOC4-215ENST00000574095 CDC14BO60729 498 aa22.23■■□□□ 1.15
NPLOC4-215ENST00000574095 DCTN3O75935 186 aa22.23■■□□□ 1.15
NPLOC4-215ENST00000574095 NGFP01138 241 aa22.23■■□□□ 1.15
NPLOC4-215ENST00000574095 GCH1P30793 250 aa22.23■■□□□ 1.15
NPLOC4-215ENST00000574095 SPIBQ01892 262 aa22.23■■□□□ 1.15
NPLOC4-215ENST00000574095 MOGQ16653 247 aa22.23■■□□□ 1.15
NPLOC4-215ENST00000574095 TMEM255AQ5JRV8 349 aa22.23■■□□□ 1.15
NPLOC4-215ENST00000574095 GPR139Q6DWJ6 353 aa22.23■■□□□ 1.15
NPLOC4-215ENST00000574095 RFPL4BQ6ZWI9 263 aa22.23■■□□□ 1.15
NPLOC4-215ENST00000574095 CXXC5Q7LFL8 322 aaKnown RBP22.23■■□□□ 1.15
NPLOC4-215ENST00000574095 DEFB107AQ8IZN7 70 aa22.23■■□□□ 1.15
NPLOC4-215ENST00000574095 GPX7Q96SL4 187 aaPredicted RBP22.23■■□□□ 1.15
NPLOC4-215ENST00000574095 OR2J1Q9GZK6 312 aa22.23■■□□□ 1.15
NPLOC4-215ENST00000574095 SYT4Q9H2B2 425 aa22.23■■□□□ 1.15
NPLOC4-215ENST00000574095 KRCC1Q9NPI7 259 aaPredicted RBP22.23■■□□□ 1.15
NPLOC4-215ENST00000574095 ATRQ13535 2644 aa22.23■■□□□ 1.15
NPLOC4-215ENST00000574095 PPIHO43447 177 aaKnown RBP22.22■■□□□ 1.15
NPLOC4-215ENST00000574095 SLC16A7O60669 478 aa22.22■■□□□ 1.15
NPLOC4-215ENST00000574095 RP2O75695 350 aa22.22■■□□□ 1.15
NPLOC4-215ENST00000574095 GADD45GO95257 159 aa22.22■■□□□ 1.15
NPLOC4-215ENST00000574095 TMEM33P57088 247 aa22.22■■□□□ 1.15
NPLOC4-215ENST00000574095 MRPS11P82912 194 aaKnown RBP22.22■■□□□ 1.15
NPLOC4-215ENST00000574095 MXRA7P84157 204 aa22.22■■□□□ 1.15
NPLOC4-215ENST00000574095 TSTQ16762 297 aaKnown RBP22.22■■□□□ 1.15
NPLOC4-215ENST00000574095 UNQ6126/PRO20091Q6UXV3 157 aa22.22■■□□□ 1.15
NPLOC4-215ENST00000574095 PTCHD4Q6ZW05 846 aa22.22■■□□□ 1.15
NPLOC4-215ENST00000574095 ZER1Q7Z7L7 766 aa22.22■■□□□ 1.15
NPLOC4-215ENST00000574095 LINC01356Q8N9X3 169 aa22.22■■□□□ 1.15
NPLOC4-215ENST00000574095 IPCEF1Q8WWN9 437 aaPredicted RBP22.22■■□□□ 1.15
NPLOC4-215ENST00000574095 MCUR1Q96AQ8 359 aa22.22■■□□□ 1.15
NPLOC4-215ENST00000574095 COA3Q9Y2R0 106 aaPredicted RBP22.22■■□□□ 1.15
NPLOC4-215ENST00000574095 WNT9BO14905 357 aa22.21■■□□□ 1.15
NPLOC4-215ENST00000574095 KHDRBS3O75525 346 aaKnown RBP22.21■■□□□ 1.15
NPLOC4-215ENST00000574095 MPZL1O95297 269 aa22.21■■□□□ 1.15
NPLOC4-215ENST00000574095 SMIM11AP58511 58 aa22.21■■□□□ 1.15
NPLOC4-215ENST00000574095 PPP1CBP62140 327 aa22.21■■□□□ 1.15
NPLOC4-215ENST00000574095 PCGF3Q3KNV8 242 aa22.21■■□□□ 1.15
NPLOC4-215ENST00000574095 C16orf89Q6UX73 402 aa22.21■■□□□ 1.15
NPLOC4-215ENST00000574095 DPY19L2P2Q6ZN68 376 aa22.21■■□□□ 1.15
NPLOC4-215ENST00000574095 CLDND2Q8NHS1 167 aa22.21■■□□□ 1.15
NPLOC4-215ENST00000574095 KLF14Q8TD94 323 aaPredicted RBP22.21■■□□□ 1.15
NPLOC4-215ENST00000574095 C4orf45Q96LM5 186 aa22.21■■□□□ 1.15
NPLOC4-215ENST00000574095 NKIRAS2Q9NYR9 191 aa22.21■■□□□ 1.15
NPLOC4-215ENST00000574095 TPD52L2O43399 206 aaKnown RBP22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms