RNA–Protein interactions for RNA: ENST00000573577.5

RPAIN-213, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,282 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-213ENST00000573577 SLC25A19Q9HC21 320 aa11.76□□□□□ -0.53
RPAIN-213ENST00000573577 POU2F3Q9UKI9 436 aa11.76□□□□□ -0.53
RPAIN-213ENST00000573577 POLR1DQ9Y2S0 133 aa11.76□□□□□ -0.53
RPAIN-213ENST00000573577 ROS1P08922 2347 aa11.76□□□□□ -0.53
RPAIN-213ENST00000573577 F8P00451 2351 aa11.76□□□□□ -0.53
RPAIN-213ENST00000573577 PRRC2AP48634 2157 aaKnown RBP11.75□□□□□ -0.53
RPAIN-213ENST00000573577 IGLV1-36A0A0B4J1U3 117 aa11.75□□□□□ -0.53
RPAIN-213ENST00000573577 IQCMA0A1B0GVH7 501 aa11.75□□□□□ -0.53
RPAIN-213ENST00000573577 ZNF503-AS2A6NEH8 195 aa11.75□□□□□ -0.53
RPAIN-213ENST00000573577 DCTN6O00399 190 aa11.75□□□□□ -0.53
RPAIN-213ENST00000573577 HLA-DQA2P01906 255 aa11.75□□□□□ -0.53
RPAIN-213ENST00000573577 SERPINA5P05154 406 aa11.75□□□□□ -0.53
RPAIN-213ENST00000573577 DANCRP0C864 163 aa11.75□□□□□ -0.53
RPAIN-213ENST00000573577 PATE4P0C8F1 98 aa11.75□□□□□ -0.53
RPAIN-213ENST00000573577 ALDH3A2P51648 485 aa11.75□□□□□ -0.53
RPAIN-213ENST00000573577 BLVRAP53004 296 aa11.75□□□□□ -0.53
RPAIN-213ENST00000573577 SLC25A1P53007 311 aa11.75□□□□□ -0.53
RPAIN-213ENST00000573577 RAD23AP54725 363 aa11.75□□□□□ -0.53
RPAIN-213ENST00000573577 ADAM8P78325 824 aa11.75□□□□□ -0.53
RPAIN-213ENST00000573577 NKX6-1P78426 367 aaPredicted RBP11.75□□□□□ -0.53
RPAIN-213ENST00000573577 NAAAQ02083 359 aa11.75□□□□□ -0.53
RPAIN-213ENST00000573577 SCRN3Q0VDG4 424 aa11.75□□□□□ -0.53
RPAIN-213ENST00000573577 DAG1Q14118 895 aa11.75□□□□□ -0.53
RPAIN-213ENST00000573577 CRMP1Q14194 572 aa11.75□□□□□ -0.53
RPAIN-213ENST00000573577 PTGES3Q15185 160 aaKnown RBP11.75□□□□□ -0.53
RPAIN-213ENST00000573577 ZNF362Q5T0B9 420 aaPredicted RBP11.75□□□□□ -0.53
RPAIN-213ENST00000573577 ACSM5Q6NUN0 579 aa11.75□□□□□ -0.53
RPAIN-213ENST00000573577 TGIF2LYQ8IUE0 185 aa11.75□□□□□ -0.53
RPAIN-213ENST00000573577 ALDH16A1Q8IZ83 802 aa11.75□□□□□ -0.53
RPAIN-213ENST00000573577 OR10H5Q8NGA6 315 aa11.75□□□□□ -0.53
RPAIN-213ENST00000573577 SMAP2Q8WU79 429 aaPredicted RBP11.75□□□□□ -0.53
RPAIN-213ENST00000573577 HTRA1Q92743 480 aa11.75□□□□□ -0.53
RPAIN-213ENST00000573577 EME1Q96AY2 570 aa11.75□□□□□ -0.53
RPAIN-213ENST00000573577 DDOQ99489 341 aa11.75□□□□□ -0.53
RPAIN-213ENST00000573577 ZNF416Q9BWM5 594 aa11.75□□□□□ -0.53
RPAIN-213ENST00000573577 GSX2Q9BZM3 304 aa11.75□□□□□ -0.53
RPAIN-213ENST00000573577 CXorf56Q9H5V9 222 aa11.75□□□□□ -0.53
RPAIN-213ENST00000573577 USE1Q9NZ43 259 aa11.75□□□□□ -0.53
RPAIN-213ENST00000573577 CISD1Q9NZ45 108 aaKnown RBP11.75□□□□□ -0.53
RPAIN-213ENST00000573577 LAMP3Q9UQV4 416 aa11.75□□□□□ -0.53
RPAIN-213ENST00000573577 TIMM10BQ9Y5J6 103 aa11.75□□□□□ -0.53
RPAIN-213ENST00000573577 ITPR3Q14573 2671 aa11.74□□□□□ -0.53
RPAIN-213ENST00000573577 PRR23D1E9PI22 279 aaPredicted RBP11.74□□□□□ -0.53
RPAIN-213ENST00000573577 EI24O14681 340 aa11.74□□□□□ -0.53
RPAIN-213ENST00000573577 SURF4O15260 269 aa11.74□□□□□ -0.53
RPAIN-213ENST00000573577 MITFO75030 526 aaPredicted RBP11.74□□□□□ -0.53
RPAIN-213ENST00000573577 ALPLP05186 524 aa11.74□□□□□ -0.53
RPAIN-213ENST00000573577 SOD3P08294 240 aa11.74□□□□□ -0.53
RPAIN-213ENST00000573577 MMP7P09237 267 aaPredicted RBP11.74□□□□□ -0.53
RPAIN-213ENST00000573577 PRR23D2P0DMB1 279 aaPredicted RBP11.74□□□□□ -0.53
RPAIN-213ENST00000573577 ZNF14P17017 642 aaPredicted RBP11.74□□□□□ -0.53
RPAIN-213ENST00000573577 ZNF32P17041 273 aa11.74□□□□□ -0.53
RPAIN-213ENST00000573577 APLNRP35414 380 aa11.74□□□□□ -0.53
RPAIN-213ENST00000573577 AQP6Q13520 282 aa11.74□□□□□ -0.53
RPAIN-213ENST00000573577 RAB39AQ14964 217 aa11.74□□□□□ -0.53
RPAIN-213ENST00000573577 RCN1Q15293 331 aa11.74□□□□□ -0.53
RPAIN-213ENST00000573577 SNAPC1Q16533 368 aa11.74□□□□□ -0.53
RPAIN-213ENST00000573577 KCNMB1Q16558 191 aa11.74□□□□□ -0.53
RPAIN-213ENST00000573577 Q5PR19 223 aa11.74□□□□□ -0.53
RPAIN-213ENST00000573577 ZBTB49Q6ZSB9 765 aa11.74□□□□□ -0.53
RPAIN-213ENST00000573577 KRTAP1-3Q8IUG1 177 aa11.74□□□□□ -0.53
RPAIN-213ENST00000573577 CBR4Q8N4T8 237 aa11.74□□□□□ -0.53
RPAIN-213ENST00000573577 WFDC11Q8NEX6 87 aa11.74□□□□□ -0.53
RPAIN-213ENST00000573577 OR4F15Q8NGB8 312 aa11.74□□□□□ -0.53
RPAIN-213ENST00000573577 OR1J2Q8NGS2 313 aa11.74□□□□□ -0.53
RPAIN-213ENST00000573577 FGFBP3Q8TAT2 258 aa11.74□□□□□ -0.53
RPAIN-213ENST00000573577 FBXO17Q96EF6 278 aa11.74□□□□□ -0.53
RPAIN-213ENST00000573577 PERPQ96FX8 193 aa11.74□□□□□ -0.53
RPAIN-213ENST00000573577 FOXN4Q96NZ1 517 aa11.74□□□□□ -0.53
RPAIN-213ENST00000573577 GABARAPL3Q9BY60 117 aa11.74□□□□□ -0.53
RPAIN-213ENST00000573577 FN3KQ9H479 309 aa11.74□□□□□ -0.53
RPAIN-213ENST00000573577 NOX3Q9HBY0 568 aa11.74□□□□□ -0.53
RPAIN-213ENST00000573577 EMC7Q9NPA0 242 aa11.74□□□□□ -0.53
RPAIN-213ENST00000573577 FAIMQ9NVQ4 179 aa11.74□□□□□ -0.53
RPAIN-213ENST00000573577 TMEFF2Q9UIK5 374 aaPredicted RBP11.74□□□□□ -0.53
RPAIN-213ENST00000573577 KCNG2Q9UJ96 466 aa11.74□□□□□ -0.53
RPAIN-213ENST00000573577 MOKQ9UQ07 419 aa11.74□□□□□ -0.53
RPAIN-213ENST00000573577 SPEF1Q9Y4P9 236 aa11.74□□□□□ -0.53
RPAIN-213ENST00000573577 MAP1AP78559 2803 aaPredicted RBP11.73□□□□□ -0.53
RPAIN-213ENST00000573577 IGHV2OR16-5A0A0B4J2B6 119 aa11.73□□□□□ -0.53
RPAIN-213ENST00000573577 VSTM5A8MXK1 200 aa11.73□□□□□ -0.53
RPAIN-213ENST00000573577 E7EQL1 145 aa11.73□□□□□ -0.53
RPAIN-213ENST00000573577 CELA3BP08861 270 aa11.73□□□□□ -0.53
RPAIN-213ENST00000573577 GAAP10253 952 aa11.73□□□□□ -0.53
RPAIN-213ENST00000573577 PAX1P15863 534 aa11.73□□□□□ -0.53
RPAIN-213ENST00000573577 ZNF823P16415 610 aa11.73□□□□□ -0.53
RPAIN-213ENST00000573577 SPI1P17947 270 aa11.73□□□□□ -0.53
RPAIN-213ENST00000573577 CADP27708 2225 aa11.73□□□□□ -0.53
RPAIN-213ENST00000573577 FMO3P31513 532 aa11.73□□□□□ -0.53
RPAIN-213ENST00000573577 PTH2RP49190 550 aa11.73□□□□□ -0.53
RPAIN-213ENST00000573577 GALK2Q01415 458 aa11.73□□□□□ -0.53
RPAIN-213ENST00000573577 TEKQ02763 1124 aa11.73□□□□□ -0.53
RPAIN-213ENST00000573577 ENDOGQ14249 297 aaKnown RBP11.73□□□□□ -0.53
RPAIN-213ENST00000573577 TBC1D28Q2M2D7 210 aa11.73□□□□□ -0.53
RPAIN-213ENST00000573577 PABPC1L2AQ5JQF8 200 aa11.73□□□□□ -0.53
RPAIN-213ENST00000573577 SHEQ5VZ18 495 aa11.73□□□□□ -0.53
RPAIN-213ENST00000573577 TMEM236Q5W0B7 351 aa11.73□□□□□ -0.53
RPAIN-213ENST00000573577 B3GLCTQ6Y288 498 aa11.73□□□□□ -0.53
RPAIN-213ENST00000573577 SLC30A7Q8NEW0 376 aa11.73□□□□□ -0.53
RPAIN-213ENST00000573577 SLC26A10Q8NG04 563 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms