RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 DEFB112Q30KQ8 113 aa16.65■□□□□ 0.26
CCDC40-206ENST00000572083 BRD3OSQ6XYD6 125 aa16.65■□□□□ 0.26
CCDC40-206ENST00000572083 GPR32P1Q8NGA4 272 aa16.65■□□□□ 0.26
CCDC40-206ENST00000572083 ITLN1Q8WWA0 313 aa16.65■□□□□ 0.26
CCDC40-206ENST00000572083 UPRTQ96BW1 309 aa16.65■□□□□ 0.26
CCDC40-206ENST00000572083 SAMD8Q96LT4 415 aa16.65■□□□□ 0.26
CCDC40-206ENST00000572083 CITED1Q99966 193 aa16.65■□□□□ 0.26
CCDC40-206ENST00000572083 OR2H1Q9GZK4 316 aa16.65■□□□□ 0.26
CCDC40-206ENST00000572083 POFUT1Q9H488 388 aa16.65■□□□□ 0.26
CCDC40-206ENST00000572083 NANOGQ9H9S0 305 aa16.65■□□□□ 0.26
CCDC40-206ENST00000572083 MEPEQ9NQ76 525 aaPredicted RBP16.65■□□□□ 0.26
CCDC40-206ENST00000572083 PPP1R3CQ9UQK1 317 aa16.65■□□□□ 0.26
CCDC40-206ENST00000572083 LRCH1Q9Y2L9 728 aa16.65■□□□□ 0.26
CCDC40-206ENST00000572083 A0A1B0GUS0 222 aa16.64■□□□□ 0.25
CCDC40-206ENST00000572083 TRAPPC13A5PLN9 417 aa16.64■□□□□ 0.25
CCDC40-206ENST00000572083 CENPBD1B2RD01 187 aa16.64■□□□□ 0.25
CCDC40-206ENST00000572083 TNFSF4P23510 183 aa16.64■□□□□ 0.25
CCDC40-206ENST00000572083 DAP3P51398 398 aaKnown RBP16.64■□□□□ 0.25
CCDC40-206ENST00000572083 RELBQ01201 579 aa16.64■□□□□ 0.25
CCDC40-206ENST00000572083 PAX2Q02962 417 aa16.64■□□□□ 0.25
CCDC40-206ENST00000572083 CD47Q08722 323 aa16.64■□□□□ 0.25
CCDC40-206ENST00000572083 OLFML2AQ68BL7 652 aa16.64■□□□□ 0.25
CCDC40-206ENST00000572083 FIP1L1Q6UN15 594 aaKnown RBP16.64■□□□□ 0.25
CCDC40-206ENST00000572083 BTNL3Q6UXE8 466 aa16.64■□□□□ 0.25
CCDC40-206ENST00000572083 Q6ZR03 302 aa16.64■□□□□ 0.25
CCDC40-206ENST00000572083 RHOUQ7L0Q8 258 aa16.64■□□□□ 0.25
CCDC40-206ENST00000572083 HDDC2Q7Z4H3 204 aa16.64■□□□□ 0.25
CCDC40-206ENST00000572083 FUNDC1Q8IVP5 155 aa16.64■□□□□ 0.25
CCDC40-206ENST00000572083 C1orf174Q8IYL3 243 aa16.64■□□□□ 0.25
CCDC40-206ENST00000572083 OR4F5Q8NH21 305 aa16.64■□□□□ 0.25
CCDC40-206ENST00000572083 HDAC2Q92769 488 aaKnown RBP16.64■□□□□ 0.25
CCDC40-206ENST00000572083 ZNF426Q9BUY5 554 aa16.64■□□□□ 0.25
CCDC40-206ENST00000572083 SSBP3Q9BWW4 388 aaPredicted RBP16.64■□□□□ 0.25
CCDC40-206ENST00000572083 MARCH7Q9H992 704 aa16.64■□□□□ 0.25
CCDC40-206ENST00000572083 ELOVL3Q9HB03 270 aa16.64■□□□□ 0.25
CCDC40-206ENST00000572083 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.64■□□□□ 0.25
CCDC40-206ENST00000572083 IL20RAQ9UHF4 553 aa16.64■□□□□ 0.25
CCDC40-206ENST00000572083 TRBV5-3A0A0A0MS03 114 aa16.63■□□□□ 0.25
CCDC40-206ENST00000572083 IGHV2-70DA0A0C4DH43 119 aa16.63■□□□□ 0.25
CCDC40-206ENST00000572083 ICMTO60725 284 aa16.63■□□□□ 0.25
CCDC40-206ENST00000572083 ZNF205O95201 554 aa16.63■□□□□ 0.25
CCDC40-206ENST00000572083 PPIAL4GP0DN37 164 aa16.63■□□□□ 0.25
CCDC40-206ENST00000572083 RPS2P15880 293 aaKnown RBP16.63■□□□□ 0.25
CCDC40-206ENST00000572083 AQP2P41181 271 aa16.63■□□□□ 0.25
CCDC40-206ENST00000572083 ARHGDIAP52565 204 aa16.63■□□□□ 0.25
CCDC40-206ENST00000572083 PCBP3P57721 371 aaKnown RBP16.63■□□□□ 0.25
CCDC40-206ENST00000572083 STX1BP61266 288 aa16.63■□□□□ 0.25
CCDC40-206ENST00000572083 TNFAIP8L3Q5GJ75 292 aa16.63■□□□□ 0.25
CCDC40-206ENST00000572083 ZNF774Q6NX45 483 aa16.63■□□□□ 0.25
CCDC40-206ENST00000572083 LRRN1Q6UXK5 716 aa16.63■□□□□ 0.25
CCDC40-206ENST00000572083 C1QL4Q86Z23 238 aa16.63■□□□□ 0.25
CCDC40-206ENST00000572083 OR10S1Q8NGN2 331 aa16.63■□□□□ 0.25
CCDC40-206ENST00000572083 PFN4Q8NHR9 129 aa16.63■□□□□ 0.25
CCDC40-206ENST00000572083 ZDHHC16Q969W1 377 aa16.63■□□□□ 0.25
CCDC40-206ENST00000572083 NMD3Q96D46 503 aaKnown RBP16.63■□□□□ 0.25
CCDC40-206ENST00000572083 SPDL1Q96EA4 605 aa16.63■□□□□ 0.25
CCDC40-206ENST00000572083 C4orf45Q96LM5 186 aa16.63■□□□□ 0.25
CCDC40-206ENST00000572083 INIPQ9NRY2 104 aa16.63■□□□□ 0.25
CCDC40-206ENST00000572083 CRYBA1P05813 215 aa16.62■□□□□ 0.25
CCDC40-206ENST00000572083 GPX2P18283 190 aa16.62■□□□□ 0.25
CCDC40-206ENST00000572083 LAP3P28838 519 aa16.62■□□□□ 0.25
CCDC40-206ENST00000572083 KRTAP10-3P60369 221 aa16.62■□□□□ 0.25
CCDC40-206ENST00000572083 ZNF362Q5T0B9 420 aaPredicted RBP16.62■□□□□ 0.25
CCDC40-206ENST00000572083 ARMC4Q5T2S8 1044 aa16.62■□□□□ 0.25
CCDC40-206ENST00000572083 BLOC1S3Q6QNY0 202 aa16.62■□□□□ 0.25
CCDC40-206ENST00000572083 ZER1Q7Z7L7 766 aa16.62■□□□□ 0.25
CCDC40-206ENST00000572083 ALDH16A1Q8IZ83 802 aa16.62■□□□□ 0.25
CCDC40-206ENST00000572083 MUC20Q8N307 709 aaPredicted RBP16.62■□□□□ 0.25
CCDC40-206ENST00000572083 POU5F2Q8N7G0 328 aa16.62■□□□□ 0.25
CCDC40-206ENST00000572083 MOSPD2Q8NHP6 518 aa16.62■□□□□ 0.25
CCDC40-206ENST00000572083 UBE2FQ969M7 185 aa16.62■□□□□ 0.25
CCDC40-206ENST00000572083 MPP4Q96JB8 637 aa16.62■□□□□ 0.25
CCDC40-206ENST00000572083 OR2V2Q96R30 315 aa16.62■□□□□ 0.25
CCDC40-206ENST00000572083 PRSS27Q9BQR3 290 aa16.62■□□□□ 0.25
CCDC40-206ENST00000572083 SMURF2Q9HAU4 748 aa16.62■□□□□ 0.25
CCDC40-206ENST00000572083 C1RLQ9NZP8 487 aa16.62■□□□□ 0.25
CCDC40-206ENST00000572083 CCDC167Q9P0B6 97 aa16.62■□□□□ 0.25
CCDC40-206ENST00000572083 IL19Q9UHD0 177 aa16.62■□□□□ 0.25
CCDC40-206ENST00000572083 CORO2BQ9UQ03 480 aa16.62■□□□□ 0.25
CCDC40-206ENST00000572083 GMEB1Q9Y692 573 aa16.62■□□□□ 0.25
CCDC40-206ENST00000572083 EVPLLA8MZ36 301 aa16.61■□□□□ 0.25
CCDC40-206ENST00000572083 SRRM5B3KS81 715 aa16.61■□□□□ 0.25
CCDC40-206ENST00000572083 TMEM178BH3BS89 294 aa16.61■□□□□ 0.25
CCDC40-206ENST00000572083 TIMM23O14925 209 aa16.61■□□□□ 0.25
CCDC40-206ENST00000572083 ABHD16AO95870 558 aa16.61■□□□□ 0.25
CCDC40-206ENST00000572083 WNT2P09544 360 aa16.61■□□□□ 0.25
CCDC40-206ENST00000572083 THRBP10828 461 aa16.61■□□□□ 0.25
CCDC40-206ENST00000572083 GSTM3P21266 225 aa16.61■□□□□ 0.25
CCDC40-206ENST00000572083 MMP16P51512 607 aa16.61■□□□□ 0.25
CCDC40-206ENST00000572083 GNB2P62879 340 aa16.61■□□□□ 0.25
CCDC40-206ENST00000572083 FAM27BQ5VT28 67 aa16.61■□□□□ 0.25
CCDC40-206ENST00000572083 HIST2H2BDQ6DRA6 164 aa16.61■□□□□ 0.25
CCDC40-206ENST00000572083 PTOV1Q86YD1 416 aa16.61■□□□□ 0.25
CCDC40-206ENST00000572083 MREGQ8N565 214 aa16.61■□□□□ 0.25
CCDC40-206ENST00000572083 CLDN22Q8N7P3 220 aa16.61■□□□□ 0.25
CCDC40-206ENST00000572083 THOC1Q96FV9 657 aaKnown RBP16.61■□□□□ 0.25
CCDC40-206ENST00000572083 RBM4BQ9BQ04 359 aaKnown RBP16.61■□□□□ 0.25
CCDC40-206ENST00000572083 CPPED1Q9BRF8 314 aaPredicted RBP16.61■□□□□ 0.25
CCDC40-206ENST00000572083 CHIAQ9BZP6 476 aa16.61■□□□□ 0.25
CCDC40-206ENST00000572083 TMEM120BA0PK00 339 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms