RNA–Protein interactions for RNA: ENST00000570727.5

NDE1-203, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 4

Gene NDE1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-203ENST00000570727 ABHD4Q8TB40 342 aa12.51□□□□□ -0.41
NDE1-203ENST00000570727 TPD52L3Q96J77 140 aa12.51□□□□□ -0.41
NDE1-203ENST00000570727 C4orf45Q96LM5 186 aa12.51□□□□□ -0.41
NDE1-203ENST00000570727 MAN2C1Q9NTJ4 1040 aa12.51□□□□□ -0.41
NDE1-203ENST00000570727 DCAF16Q9NXF7 216 aa12.51□□□□□ -0.41
NDE1-203ENST00000570727 SNX13Q9Y5W8 968 aa12.51□□□□□ -0.41
NDE1-203ENST00000570727 TRAV27A0A087WT01 109 aa12.5□□□□□ -0.41
NDE1-203ENST00000570727 GMNCA6NCL1 334 aa12.5□□□□□ -0.41
NDE1-203ENST00000570727 BBIP1A8MTZ0 92 aa12.5□□□□□ -0.41
NDE1-203ENST00000570727 FAM220BPB1ANY3 271 aa12.5□□□□□ -0.41
NDE1-203ENST00000570727 H3BSA7 217 aa12.5□□□□□ -0.41
NDE1-203ENST00000570727 TRIM77I1YAP6 450 aa12.5□□□□□ -0.41
NDE1-203ENST00000570727 FFAR1O14842 300 aa12.5□□□□□ -0.41
NDE1-203ENST00000570727 FSHBP01225 129 aa12.5□□□□□ -0.41
NDE1-203ENST00000570727 CD55P08174 381 aa12.5□□□□□ -0.41
NDE1-203ENST00000570727 NR2C1P13056 603 aa12.5□□□□□ -0.41
NDE1-203ENST00000570727 ZFP36P26651 326 aaKnown RBP12.5□□□□□ -0.41
NDE1-203ENST00000570727 YAP1P46937 504 aaKnown RBP12.5□□□□□ -0.41
NDE1-203ENST00000570727 ACTG1P63261 375 aa12.5□□□□□ -0.41
NDE1-203ENST00000570727 LCN2P80188 198 aa12.5□□□□□ -0.41
NDE1-203ENST00000570727 PRKCDQ05655 676 aa12.5□□□□□ -0.41
NDE1-203ENST00000570727 PSG7Q13046 419 aa12.5□□□□□ -0.41
NDE1-203ENST00000570727 LRRC23Q53EV4 343 aaPredicted RBP12.5□□□□□ -0.41
NDE1-203ENST00000570727 ZNF771Q7L3S4 317 aaPredicted RBP12.5□□□□□ -0.41
NDE1-203ENST00000570727 HDXQ7Z353 690 aa12.5□□□□□ -0.41
NDE1-203ENST00000570727 MICU2Q8IYU8 434 aa12.5□□□□□ -0.41
NDE1-203ENST00000570727 ZDHHC22Q8N966 263 aa12.5□□□□□ -0.41
NDE1-203ENST00000570727 NANPQ8TBE9 248 aa12.5□□□□□ -0.41
NDE1-203ENST00000570727 FNDC8Q8TC99 324 aa12.5□□□□□ -0.41
NDE1-203ENST00000570727 GEMIN6Q8WXD5 167 aaKnown RBP12.5□□□□□ -0.41
NDE1-203ENST00000570727 GCDHQ92947 438 aaPredicted RBP12.5□□□□□ -0.41
NDE1-203ENST00000570727 PRRC1Q96M27 445 aa12.5□□□□□ -0.41
NDE1-203ENST00000570727 GAL3ST1Q99999 423 aa12.5□□□□□ -0.41
NDE1-203ENST00000570727 EGLN1Q9GZT9 426 aa12.5□□□□□ -0.41
NDE1-203ENST00000570727 POFUT1Q9H488 388 aa12.5□□□□□ -0.41
NDE1-203ENST00000570727 C7orf69Q9H7B7 122 aa12.5□□□□□ -0.41
NDE1-203ENST00000570727 VIPAS39Q9H9C1 493 aa12.5□□□□□ -0.41
NDE1-203ENST00000570727 MSL2Q9HCI7 577 aa12.5□□□□□ -0.41
NDE1-203ENST00000570727 ESM1Q9NQ30 184 aa12.5□□□□□ -0.41
NDE1-203ENST00000570727 CYSLTR2Q9NS75 346 aa12.5□□□□□ -0.41
NDE1-203ENST00000570727 GMPR2Q9P2T1 348 aaKnown RBP12.5□□□□□ -0.41
NDE1-203ENST00000570727 RHCGQ9UBD6 479 aa12.5□□□□□ -0.41
NDE1-203ENST00000570727 ZDHHC8Q9ULC8 765 aa12.5□□□□□ -0.41
NDE1-203ENST00000570727 TRRAPQ9Y4A5 3859 aa12.49□□□□□ -0.41
NDE1-203ENST00000570727 J3KTA2 159 aa12.49□□□□□ -0.41
NDE1-203ENST00000570727 EGR1P18146 543 aa12.49□□□□□ -0.41
NDE1-203ENST00000570727 GATA3P23771 443 aa12.49□□□□□ -0.41
NDE1-203ENST00000570727 PCBD1P61457 104 aa12.49□□□□□ -0.41
NDE1-203ENST00000570727 SLC3A1Q07837 685 aa12.49□□□□□ -0.41
NDE1-203ENST00000570727 SF3A3Q12874 501 aaKnown RBP eCLIP12.49□□□□□ -0.41
NDE1-203ENST00000570727 CDK5R2Q13319 367 aa12.49□□□□□ -0.41
NDE1-203ENST00000570727 FAM205BPQ63HN1 556 aa12.49□□□□□ -0.41
NDE1-203ENST00000570727 CGB2Q6NT52 195 aa12.49□□□□□ -0.41
NDE1-203ENST00000570727 VTCN1Q7Z7D3 282 aa12.49□□□□□ -0.41
NDE1-203ENST00000570727 SYT9Q86SS6 491 aa12.49□□□□□ -0.41
NDE1-203ENST00000570727 OAFQ86UD1 273 aa12.49□□□□□ -0.41
NDE1-203ENST00000570727 NRMQ8IXM6 262 aa12.49□□□□□ -0.41
NDE1-203ENST00000570727 OR2T12Q8NG77 320 aa12.49□□□□□ -0.41
NDE1-203ENST00000570727 DVL3Q92997 716 aaPredicted RBP12.49□□□□□ -0.41
NDE1-203ENST00000570727 DIRC2Q96SL1 478 aa12.49□□□□□ -0.41
NDE1-203ENST00000570727 SLC6A7Q99884 636 aa12.49□□□□□ -0.41
NDE1-203ENST00000570727 RBM4Q9BWF3 364 aaKnown RBP12.49□□□□□ -0.41
NDE1-203ENST00000570727 SUCNR1Q9BXA5 334 aa12.49□□□□□ -0.41
NDE1-203ENST00000570727 ELOVL3Q9HB03 270 aa12.49□□□□□ -0.41
NDE1-203ENST00000570727 POLE4Q9NR33 117 aa12.49□□□□□ -0.41
NDE1-203ENST00000570727 GID8Q9NWU2 228 aa12.49□□□□□ -0.41
NDE1-203ENST00000570727 CGGBP1Q9UFW8 167 aaPredicted RBP12.49□□□□□ -0.41
NDE1-203ENST00000570727 A0A087WUU8 490 aa12.48□□□□□ -0.41
NDE1-203ENST00000570727 A0A1W2PPL8 197 aa12.48□□□□□ -0.41
NDE1-203ENST00000570727 ELOVL7A1L3X0 281 aa12.48□□□□□ -0.41
NDE1-203ENST00000570727 ISPDA4D126 451 aa12.48□□□□□ -0.41
NDE1-203ENST00000570727 A6NIZ1 184 aa12.48□□□□□ -0.41
NDE1-203ENST00000570727 C12orf71A8MTZ7 269 aa12.48□□□□□ -0.41
NDE1-203ENST00000570727 IGHV2-70P01814 119 aa12.48□□□□□ -0.41
NDE1-203ENST00000570727 ZNF26P17031 533 aaPredicted RBP12.48□□□□□ -0.41
NDE1-203ENST00000570727 MSR1P21757 451 aa12.48□□□□□ -0.41
NDE1-203ENST00000570727 GUCA1AP43080 201 aaPredicted RBP12.48□□□□□ -0.41
NDE1-203ENST00000570727 ARHGDIAP52565 204 aa12.48□□□□□ -0.41
NDE1-203ENST00000570727 RAP1BP61224 184 aa12.48□□□□□ -0.41
NDE1-203ENST00000570727 RAP1AP62834 184 aa12.48□□□□□ -0.41
NDE1-203ENST00000570727 TUSC1Q2TAM9 212 aa12.48□□□□□ -0.41
NDE1-203ENST00000570727 MTX3Q5HYI7 312 aa12.48□□□□□ -0.41
NDE1-203ENST00000570727 TBPL2Q6SJ96 375 aa12.48□□□□□ -0.41
NDE1-203ENST00000570727 Q6ZR03 302 aa12.48□□□□□ -0.41
NDE1-203ENST00000570727 OFCC1Q8IZS5 231 aa12.48□□□□□ -0.41
NDE1-203ENST00000570727 C3orf56Q8N813 242 aa12.48□□□□□ -0.41
NDE1-203ENST00000570727 PCYOX1LQ8NBM8 494 aa12.48□□□□□ -0.41
NDE1-203ENST00000570727 OR13C2Q8NGS9 318 aa12.48□□□□□ -0.41
NDE1-203ENST00000570727 JMJD8Q96S16 334 aa12.48□□□□□ -0.41
NDE1-203ENST00000570727 EMC7Q9NPA0 242 aa12.48□□□□□ -0.41
NDE1-203ENST00000570727 MRGBPQ9NV56 204 aa12.48□□□□□ -0.41
NDE1-203ENST00000570727 CMTM6Q9NX76 183 aa12.48□□□□□ -0.41
NDE1-203ENST00000570727 UBAP1Q9NZ09 502 aa12.48□□□□□ -0.41
NDE1-203ENST00000570727 EGFL7Q9UHF1 273 aa12.48□□□□□ -0.41
NDE1-203ENST00000570727 STARD10Q9Y365 291 aa12.48□□□□□ -0.41
NDE1-203ENST00000570727 NPTNQ9Y639 398 aa12.48□□□□□ -0.41
NDE1-203ENST00000570727 MEGF8Q7Z7M0 2845 aa12.47□□□□□ -0.41
NDE1-203ENST00000570727 PPIAL4EA0A075B759 164 aa12.47□□□□□ -0.41
NDE1-203ENST00000570727 PPIAL4CA0A0B4J2A2 164 aa12.47□□□□□ -0.41
NDE1-203ENST00000570727 EFCAB9A8MZ26 197 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms