RNA–Protein interactions for RNA: ENST00000569720.1

SPG7-221, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 909 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-221ENST00000569720 IFNW1P05000 195 aa11.21□□□□□ -0.61
SPG7-221ENST00000569720 ACADSP16219 412 aa11.21□□□□□ -0.61
SPG7-221ENST00000569720 NCK1P16333 377 aa11.21□□□□□ -0.61
SPG7-221ENST00000569720 RHCEP18577 417 aa11.21□□□□□ -0.61
SPG7-221ENST00000569720 CCNOP22674 350 aa11.21□□□□□ -0.61
SPG7-221ENST00000569720 MSX2P35548 267 aaPredicted RBP11.21□□□□□ -0.61
SPG7-221ENST00000569720 CRYBB2P43320 205 aa11.21□□□□□ -0.61
SPG7-221ENST00000569720 UGT2B15P54855 530 aa11.21□□□□□ -0.61
SPG7-221ENST00000569720 LMO4P61968 165 aa11.21□□□□□ -0.61
SPG7-221ENST00000569720 C10orf128Q5T292 105 aa11.21□□□□□ -0.61
SPG7-221ENST00000569720 FAHD2BQ6P2I3 314 aaPredicted RBP11.21□□□□□ -0.61
SPG7-221ENST00000569720 C12orf54Q6X4T0 127 aa11.21□□□□□ -0.61
SPG7-221ENST00000569720 TSPYL5Q86VY4 417 aaPredicted RBP11.21□□□□□ -0.61
SPG7-221ENST00000569720 SPATA24Q86W54 205 aa11.21□□□□□ -0.61
SPG7-221ENST00000569720 MEX3DQ86XN8 651 aaKnown RBP11.21□□□□□ -0.61
SPG7-221ENST00000569720 OR1J1Q8NGS3 322 aa11.21□□□□□ -0.61
SPG7-221ENST00000569720 ZNF418Q8TF45 676 aaPredicted RBP11.21□□□□□ -0.61
SPG7-221ENST00000569720 ZFAND2BQ8WV99 257 aa11.21□□□□□ -0.61
SPG7-221ENST00000569720 RAB39BQ96DA2 213 aa11.21□□□□□ -0.61
SPG7-221ENST00000569720 FAHD2AQ96GK7 314 aa11.21□□□□□ -0.61
SPG7-221ENST00000569720 MRPL13Q9BYD1 178 aaKnown RBP11.21□□□□□ -0.61
SPG7-221ENST00000569720 ANKRD19PQ9H560 264 aa11.21□□□□□ -0.61
SPG7-221ENST00000569720 SIAEQ9HAT2 523 aa11.21□□□□□ -0.61
SPG7-221ENST00000569720 EIF3KQ9UBQ5 218 aaKnown RBP11.21□□□□□ -0.61
SPG7-221ENST00000569720 IGHV1-69-2A0A0G2JMI3 117 aa11.2□□□□□ -0.62
SPG7-221ENST00000569720 WNT9BO14905 357 aa11.2□□□□□ -0.62
SPG7-221ENST00000569720 KRT36O76013 467 aa11.2□□□□□ -0.62
SPG7-221ENST00000569720 PNPP00491 289 aa11.2□□□□□ -0.62
SPG7-221ENST00000569720 MMP7P09237 267 aaPredicted RBP11.2□□□□□ -0.62
SPG7-221ENST00000569720 STOMP27105 288 aa11.2□□□□□ -0.62
SPG7-221ENST00000569720 GCH1P30793 250 aa11.2□□□□□ -0.62
SPG7-221ENST00000569720 AQP2P41181 271 aa11.2□□□□□ -0.62
SPG7-221ENST00000569720 MAGEA2P43356 314 aa11.2□□□□□ -0.62
SPG7-221ENST00000569720 ZNF133P52736 654 aaPredicted RBP11.2□□□□□ -0.62
SPG7-221ENST00000569720 CRYBA2P53672 197 aa11.2□□□□□ -0.62
SPG7-221ENST00000569720 ERVS71-1P61550 626 aa11.2□□□□□ -0.62
SPG7-221ENST00000569720 MRPS34P82930 218 aaKnown RBP11.2□□□□□ -0.62
SPG7-221ENST00000569720 MVKQ03426 396 aa11.2□□□□□ -0.62
SPG7-221ENST00000569720 RUNX1T1Q06455 604 aa11.2□□□□□ -0.62
SPG7-221ENST00000569720 HFEQ30201 348 aa11.2□□□□□ -0.62
SPG7-221ENST00000569720 ZNF718Q3SXZ3 478 aa11.2□□□□□ -0.62
SPG7-221ENST00000569720 ACSM5Q6NUN0 579 aa11.2□□□□□ -0.62
SPG7-221ENST00000569720 CYP2R1Q6VVX0 501 aa11.2□□□□□ -0.62
SPG7-221ENST00000569720 NKAIN4Q8IVV8 208 aa11.2□□□□□ -0.62
SPG7-221ENST00000569720 PFN4Q8NHR9 129 aa11.2□□□□□ -0.62
SPG7-221ENST00000569720 TMEM255BQ8WV15 326 aa11.2□□□□□ -0.62
SPG7-221ENST00000569720 TMEM239Q8WW34 195 aa11.2□□□□□ -0.62
SPG7-221ENST00000569720 STMN2Q93045 179 aa11.2□□□□□ -0.62
SPG7-221ENST00000569720 TIMD4Q96H15 378 aa11.2□□□□□ -0.62
SPG7-221ENST00000569720 RSRC1Q96IZ7 334 aaKnown RBP11.2□□□□□ -0.62
SPG7-221ENST00000569720 TPD52L3Q96J77 140 aa11.2□□□□□ -0.62
SPG7-221ENST00000569720 HSH2DQ96JZ2 352 aa11.2□□□□□ -0.62
SPG7-221ENST00000569720 TSPAN32Q96QS1 320 aa11.2□□□□□ -0.62
SPG7-221ENST00000569720 SEPHS2Q99611 448 aa11.2□□□□□ -0.62
SPG7-221ENST00000569720 ZNF665Q9H7R5 613 aa11.2□□□□□ -0.62
SPG7-221ENST00000569720 SAP30LQ9HAJ7 183 aa11.2□□□□□ -0.62
SPG7-221ENST00000569720 SMURF2Q9HAU4 748 aa11.2□□□□□ -0.62
SPG7-221ENST00000569720 RIMS3Q9UJD0 308 aa11.2□□□□□ -0.62
SPG7-221ENST00000569720 MED31Q9Y3C7 131 aa11.2□□□□□ -0.62
SPG7-221ENST00000569720 WNK2Q9Y3S1 2297 aa11.2□□□□□ -0.62
SPG7-221ENST00000569720 PLSCR5A0PG75 271 aa11.19□□□□□ -0.62
SPG7-221ENST00000569720 NPIPB13A6NJU9 1138 aa11.19□□□□□ -0.62
SPG7-221ENST00000569720 CLDN25C9JDP6 229 aa11.19□□□□□ -0.62
SPG7-221ENST00000569720 NPIPB4C9JG80 1138 aa11.19□□□□□ -0.62
SPG7-221ENST00000569720 H0YHG0 523 aa11.19□□□□□ -0.62
SPG7-221ENST00000569720 VENTXO95231 258 aa11.19□□□□□ -0.62
SPG7-221ENST00000569720 SLC2A10O95528 541 aa11.19□□□□□ -0.62
SPG7-221ENST00000569720 IGHV3-13P01766 116 aa11.19□□□□□ -0.62
SPG7-221ENST00000569720 SEMG1P04279 462 aa11.19□□□□□ -0.62
SPG7-221ENST00000569720 FABP3P05413 133 aa11.19□□□□□ -0.62
SPG7-221ENST00000569720 ATP6V1B2P21281 511 aa11.19□□□□□ -0.62
SPG7-221ENST00000569720 GUCA1AP43080 201 aaPredicted RBP11.19□□□□□ -0.62
SPG7-221ENST00000569720 ZNF81P51508 661 aa11.19□□□□□ -0.62
SPG7-221ENST00000569720 GLO1Q04760 184 aa11.19□□□□□ -0.62
SPG7-221ENST00000569720 CD47Q08722 323 aa11.19□□□□□ -0.62
SPG7-221ENST00000569720 TAF11Q15544 211 aa11.19□□□□□ -0.62
SPG7-221ENST00000569720 SGCAQ16586 387 aa11.19□□□□□ -0.62
SPG7-221ENST00000569720 PABPC1L2AQ5JQF8 200 aa11.19□□□□□ -0.62
SPG7-221ENST00000569720 FAM209AQ5JX71 171 aa11.19□□□□□ -0.62
SPG7-221ENST00000569720 AVPI1Q5T686 147 aa11.19□□□□□ -0.62
SPG7-221ENST00000569720 THSD4Q6ZMP0 1018 aa11.19□□□□□ -0.62
SPG7-221ENST00000569720 USP51Q70EK9 711 aa11.19□□□□□ -0.62
SPG7-221ENST00000569720 C1orf174Q8IYL3 243 aa11.19□□□□□ -0.62
SPG7-221ENST00000569720 ALDH16A1Q8IZ83 802 aa11.19□□□□□ -0.62
SPG7-221ENST00000569720 LINC00471Q8N535 108 aa11.19□□□□□ -0.62
SPG7-221ENST00000569720 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.19□□□□□ -0.62
SPG7-221ENST00000569720 CPEB3Q8NE35 698 aaKnown RBP11.19□□□□□ -0.62
SPG7-221ENST00000569720 LIPHQ8WWY8 451 aa11.19□□□□□ -0.62
SPG7-221ENST00000569720 RAB1CQ92928 201 aa11.19□□□□□ -0.62
SPG7-221ENST00000569720 ELMOD3Q96FG2 381 aa11.19□□□□□ -0.62
SPG7-221ENST00000569720 RBP7Q96R05 134 aa11.19□□□□□ -0.62
SPG7-221ENST00000569720 OSBPL10Q9BXB5 764 aa11.19□□□□□ -0.62
SPG7-221ENST00000569720 AP4S1Q9Y587 144 aa11.19□□□□□ -0.62
SPG7-221ENST00000569720 ENPP4Q9Y6X5 453 aa11.19□□□□□ -0.62
SPG7-221ENST00000569720 A0A0G2JMP0 313 aa11.18□□□□□ -0.62
SPG7-221ENST00000569720 A0A0X1KG70 313 aa11.18□□□□□ -0.62
SPG7-221ENST00000569720 C5orf49A4QMS7 147 aa11.18□□□□□ -0.62
SPG7-221ENST00000569720 DEAF1O75398 565 aaPredicted RBP11.18□□□□□ -0.62
SPG7-221ENST00000569720 MPZL1O95297 269 aa11.18□□□□□ -0.62
SPG7-221ENST00000569720 ZNF32P17041 273 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms