RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 MSX2P35548 267 aaPredicted RBP6.67□□□□□ -1.34
CDH3-209ENST00000569080 RPL4P36578 427 aaKnown RBP6.67□□□□□ -1.34
CDH3-209ENST00000569080 MPV17P39210 176 aa6.67□□□□□ -1.34
CDH3-209ENST00000569080 RAD52P43351 418 aa6.67□□□□□ -1.34
CDH3-209ENST00000569080 MMP15P51511 669 aa6.67□□□□□ -1.34
CDH3-209ENST00000569080 CHN2P52757 468 aa6.67□□□□□ -1.34
CDH3-209ENST00000569080 CDH15P55291 814 aa6.67□□□□□ -1.34
CDH3-209ENST00000569080 PLP2Q04941 152 aa6.67□□□□□ -1.34
CDH3-209ENST00000569080 SGCAQ16586 387 aa6.67□□□□□ -1.34
CDH3-209ENST00000569080 ALKBH6Q3KRA9 238 aa6.67□□□□□ -1.34
CDH3-209ENST00000569080 FGD3Q5JSP0 725 aa6.67□□□□□ -1.34
CDH3-209ENST00000569080 SAMD4BQ5PRF9 694 aaKnown RBP6.67□□□□□ -1.34
CDH3-209ENST00000569080 SPATA46Q5T0L3 261 aa6.67□□□□□ -1.34
CDH3-209ENST00000569080 MBNL2Q5VZF2 373 aaKnown RBP6.67□□□□□ -1.34
CDH3-209ENST00000569080 OTPQ5XKR4 325 aa6.67□□□□□ -1.34
CDH3-209ENST00000569080 ZNF774Q6NX45 483 aa6.67□□□□□ -1.34
CDH3-209ENST00000569080 IL17RELQ6ZVW7 336 aa6.67□□□□□ -1.34
CDH3-209ENST00000569080 CXXC5Q7LFL8 322 aaKnown RBP6.67□□□□□ -1.34
CDH3-209ENST00000569080 CPLX4Q7Z7G2 160 aa6.67□□□□□ -1.34
CDH3-209ENST00000569080 ZER1Q7Z7L7 766 aa6.67□□□□□ -1.34
CDH3-209ENST00000569080 SYT9Q86SS6 491 aa6.67□□□□□ -1.34
CDH3-209ENST00000569080 ADCK1Q86TW2 530 aa6.67□□□□□ -1.34
CDH3-209ENST00000569080 OR1J1Q8NGS3 322 aa6.67□□□□□ -1.34
CDH3-209ENST00000569080 SYNPRQ8TBG9 265 aa6.67□□□□□ -1.34
CDH3-209ENST00000569080 PYURFQ96I23 114 aa6.67□□□□□ -1.34
CDH3-209ENST00000569080 ZNF570Q96NI8 536 aa6.67□□□□□ -1.34
CDH3-209ENST00000569080 RBP7Q96R05 134 aa6.67□□□□□ -1.34
CDH3-209ENST00000569080 SYT4Q9H2B2 425 aa6.67□□□□□ -1.34
CDH3-209ENST00000569080 CCNB1IP1Q9NPC3 277 aa6.67□□□□□ -1.34
CDH3-209ENST00000569080 HINT3Q9NQE9 182 aaKnown RBP6.67□□□□□ -1.34
CDH3-209ENST00000569080 ZNF275Q9NSD4 429 aaPredicted RBP6.67□□□□□ -1.34
CDH3-209ENST00000569080 NKIRAS2Q9NYR9 191 aa6.67□□□□□ -1.34
CDH3-209ENST00000569080 TAAR3PQ9P1P4 343 aa6.67□□□□□ -1.34
CDH3-209ENST00000569080 IL20RAQ9UHF4 553 aa6.67□□□□□ -1.34
CDH3-209ENST00000569080 KCNS2Q9ULS6 477 aa6.67□□□□□ -1.34
CDH3-209ENST00000569080 IGLV1-36A0A0B4J1U3 117 aa6.66□□□□□ -1.34
CDH3-209ENST00000569080 C5orf49A4QMS7 147 aa6.66□□□□□ -1.34
CDH3-209ENST00000569080 OR6C6A6NF89 314 aa6.66□□□□□ -1.34
CDH3-209ENST00000569080 H3BSA7 217 aa6.66□□□□□ -1.34
CDH3-209ENST00000569080 DCTN6O00399 190 aa6.66□□□□□ -1.34
CDH3-209ENST00000569080 SOCS2O14508 198 aa6.66□□□□□ -1.34
CDH3-209ENST00000569080 NGFP01138 241 aa6.66□□□□□ -1.34
CDH3-209ENST00000569080 LCKP06239 509 aa6.66□□□□□ -1.34
CDH3-209ENST00000569080 ADH4P08319 380 aa6.66□□□□□ -1.34
CDH3-209ENST00000569080 COX5BP10606 129 aa6.66□□□□□ -1.34
CDH3-209ENST00000569080 FPR3P25089 353 aa6.66□□□□□ -1.34
CDH3-209ENST00000569080 CDKN2AP42771 156 aaKnown RBP6.66□□□□□ -1.34
CDH3-209ENST00000569080 MAGEA2P43356 314 aa6.66□□□□□ -1.34
CDH3-209ENST00000569080 GSSP48637 474 aa6.66□□□□□ -1.34
CDH3-209ENST00000569080 GDI2P50395 445 aaKnown RBP6.66□□□□□ -1.34
CDH3-209ENST00000569080 GLO1Q04760 184 aa6.66□□□□□ -1.34
CDH3-209ENST00000569080 DBPQ10586 325 aaPredicted RBP6.66□□□□□ -1.34
CDH3-209ENST00000569080 CCNIQ14094 377 aa6.66□□□□□ -1.34
CDH3-209ENST00000569080 NKPD1Q17RQ9 610 aa6.66□□□□□ -1.34
CDH3-209ENST00000569080 PCGF3Q3KNV8 242 aa6.66□□□□□ -1.34
CDH3-209ENST00000569080 FAM120AOSQ5T036 256 aa6.66□□□□□ -1.34
CDH3-209ENST00000569080 GPR139Q6DWJ6 353 aa6.66□□□□□ -1.34
CDH3-209ENST00000569080 DPY19L2P2Q6ZN68 376 aa6.66□□□□□ -1.34
CDH3-209ENST00000569080 VASH1Q7L8A9 365 aaPredicted RBP6.66□□□□□ -1.34
CDH3-209ENST00000569080 DEFB107AQ8IZN7 70 aa6.66□□□□□ -1.34
CDH3-209ENST00000569080 FITM2Q8N6M3 262 aa6.66□□□□□ -1.34
CDH3-209ENST00000569080 OR52J3Q8NH60 311 aa6.66□□□□□ -1.34
CDH3-209ENST00000569080 CLDND2Q8NHS1 167 aa6.66□□□□□ -1.34
CDH3-209ENST00000569080 SLC25A40Q8TBP6 338 aa6.66□□□□□ -1.34
CDH3-209ENST00000569080 FANK1Q8TC84 345 aa6.66□□□□□ -1.34
CDH3-209ENST00000569080 KLF14Q8TD94 323 aaPredicted RBP6.66□□□□□ -1.34
CDH3-209ENST00000569080 C11orf40Q8WZ69 217 aa6.66□□□□□ -1.34
CDH3-209ENST00000569080 RDH5Q92781 318 aa6.66□□□□□ -1.34
CDH3-209ENST00000569080 NSMCE2Q96MF7 247 aa6.66□□□□□ -1.34
CDH3-209ENST00000569080 LRRC37BQ96QE4 947 aa6.66□□□□□ -1.34
CDH3-209ENST00000569080 WACQ9BTA9 647 aa6.66□□□□□ -1.34
CDH3-209ENST00000569080 OR2J1Q9GZK6 312 aa6.66□□□□□ -1.34
CDH3-209ENST00000569080 LRMDAQ9H2I8 198 aa6.66□□□□□ -1.34
CDH3-209ENST00000569080 POFUT1Q9H488 388 aa6.66□□□□□ -1.34
CDH3-209ENST00000569080 IL1RAPQ9NPH3 570 aa6.66□□□□□ -1.34
CDH3-209ENST00000569080 SLCO1C1Q9NYB5 712 aa6.66□□□□□ -1.34
CDH3-209ENST00000569080 GRHPRQ9UBQ7 328 aa6.66□□□□□ -1.34
CDH3-209ENST00000569080 LPAR3Q9UBY5 353 aa6.66□□□□□ -1.34
CDH3-209ENST00000569080 FAM32AQ9Y421 112 aaKnown RBP6.66□□□□□ -1.34
CDH3-209ENST00000569080 TIMM10BQ9Y5J6 103 aa6.66□□□□□ -1.34
CDH3-209ENST00000569080 CACNG2Q9Y698 323 aa6.66□□□□□ -1.34
CDH3-209ENST00000569080 TCRBV5S2A0A599 114 aa6.65□□□□□ -1.34
CDH3-209ENST00000569080 UNC119BA6NIH7 251 aa6.65□□□□□ -1.34
CDH3-209ENST00000569080 C12orf71A8MTZ7 269 aa6.65□□□□□ -1.34
CDH3-209ENST00000569080 FAM157AC9JC47 383 aa6.65□□□□□ -1.34
CDH3-209ENST00000569080 XKRYO14609 159 aa6.65□□□□□ -1.34
CDH3-209ENST00000569080 ARPC3O15145 178 aa6.65□□□□□ -1.34
CDH3-209ENST00000569080 DOK2O60496 412 aa6.65□□□□□ -1.34
CDH3-209ENST00000569080 SLC16A7O60669 478 aa6.65□□□□□ -1.34
CDH3-209ENST00000569080 DCTN3O75935 186 aa6.65□□□□□ -1.34
CDH3-209ENST00000569080 GADD45GO95257 159 aa6.65□□□□□ -1.34
CDH3-209ENST00000569080 MPZL1O95297 269 aa6.65□□□□□ -1.34
CDH3-209ENST00000569080 PPP1R3DO95685 299 aa6.65□□□□□ -1.34
CDH3-209ENST00000569080 GPANK1O95872 356 aa6.65□□□□□ -1.34
CDH3-209ENST00000569080 TGFAP01135 160 aa6.65□□□□□ -1.34
CDH3-209ENST00000569080 IGHV1-46P01743 117 aa6.65□□□□□ -1.34
CDH3-209ENST00000569080 ITGA2P17301 1181 aa6.65□□□□□ -1.34
CDH3-209ENST00000569080 CCNOP22674 350 aa6.65□□□□□ -1.34
CDH3-209ENST00000569080 RRM2P31350 389 aa6.65□□□□□ -1.34
CDH3-209ENST00000569080 THBS2P35442 1172 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms