RNA–Protein interactions for RNA: ENST00000569062.1

ABCA3-206, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 5

Gene ABCA3, Length 900 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-206ENST00000569062 NSL1Q96IY1 281 aa17.25■□□□□ 0.35
ABCA3-206ENST00000569062 SYT4Q9H2B2 425 aa17.25■□□□□ 0.35
ABCA3-206ENST00000569062 IL1RAPQ9NPH3 570 aa17.25■□□□□ 0.35
ABCA3-206ENST00000569062 TIMM10BQ9Y5J6 103 aa17.25■□□□□ 0.35
ABCA3-206ENST00000569062 IER3IP1Q9Y5U9 82 aa17.25■□□□□ 0.35
ABCA3-206ENST00000569062 LRP5LA4QPB2 252 aa17.24■□□□□ 0.35
ABCA3-206ENST00000569062 AHCYL1O43865 530 aa17.24■□□□□ 0.35
ABCA3-206ENST00000569062 FAM107AO95990 144 aa17.24■□□□□ 0.35
ABCA3-206ENST00000569062 APEHP13798 732 aaKnown RBP17.24■□□□□ 0.35
ABCA3-206ENST00000569062 ZNF23P17027 643 aa17.24■□□□□ 0.35
ABCA3-206ENST00000569062 COL8A2P25067 703 aa17.24■□□□□ 0.35
ABCA3-206ENST00000569062 GDI2P50395 445 aaKnown RBP17.24■□□□□ 0.35
ABCA3-206ENST00000569062 KLF3P57682 345 aaPredicted RBP17.24■□□□□ 0.35
ABCA3-206ENST00000569062 SMIM11AP58511 58 aa17.24■□□□□ 0.35
ABCA3-206ENST00000569062 RIN1Q13671 783 aa17.24■□□□□ 0.35
ABCA3-206ENST00000569062 NKPD1Q17RQ9 610 aa17.24■□□□□ 0.35
ABCA3-206ENST00000569062 OTPQ5XKR4 325 aa17.24■□□□□ 0.35
ABCA3-206ENST00000569062 GPR139Q6DWJ6 353 aa17.24■□□□□ 0.35
ABCA3-206ENST00000569062 PTCHD4Q6ZW05 846 aa17.24■□□□□ 0.35
ABCA3-206ENST00000569062 ZDHHC21Q8IVQ6 265 aa17.24■□□□□ 0.35
ABCA3-206ENST00000569062 ALDH16A1Q8IZ83 802 aa17.24■□□□□ 0.35
ABCA3-206ENST00000569062 SOX7Q9BT81 388 aa17.24■□□□□ 0.35
ABCA3-206ENST00000569062 C12orf71A8MTZ7 269 aa17.23■□□□□ 0.35
ABCA3-206ENST00000569062 OR10H3O60404 316 aa17.23■□□□□ 0.35
ABCA3-206ENST00000569062 SLC16A7O60669 478 aa17.23■□□□□ 0.35
ABCA3-206ENST00000569062 NCR1O76036 304 aa17.23■□□□□ 0.35
ABCA3-206ENST00000569062 ATP6V1B2P21281 511 aa17.23■□□□□ 0.35
ABCA3-206ENST00000569062 CDKN2AP42771 156 aaKnown RBP17.23■□□□□ 0.35
ABCA3-206ENST00000569062 MAGEB1P43366 347 aa17.23■□□□□ 0.35
ABCA3-206ENST00000569062 GZMKP49863 264 aa17.23■□□□□ 0.35
ABCA3-206ENST00000569062 MNAT1P51948 309 aa17.23■□□□□ 0.35
ABCA3-206ENST00000569062 SELENOVP59797 346 aa17.23■□□□□ 0.35
ABCA3-206ENST00000569062 PCBD1P61457 104 aa17.23■□□□□ 0.35
ABCA3-206ENST00000569062 TRIP10Q15642 601 aa17.23■□□□□ 0.35
ABCA3-206ENST00000569062 SPATA46Q5T0L3 261 aa17.23■□□□□ 0.35
ABCA3-206ENST00000569062 SMARCD3Q6STE5 483 aa17.23■□□□□ 0.35
ABCA3-206ENST00000569062 DPY19L2P2Q6ZN68 376 aa17.23■□□□□ 0.35
ABCA3-206ENST00000569062 RINLQ6ZS11 566 aa17.23■□□□□ 0.35
ABCA3-206ENST00000569062 MSI2Q96DH6 328 aaKnown RBP17.23■□□□□ 0.35
ABCA3-206ENST00000569062 RERGLQ9H628 205 aa17.23■□□□□ 0.35
ABCA3-206ENST00000569062 VSX1Q9NZR4 365 aaPredicted RBP17.23■□□□□ 0.35
ABCA3-206ENST00000569062 COA3Q9Y2R0 106 aaPredicted RBP17.23■□□□□ 0.35
ABCA3-206ENST00000569062 LILRA1O75019 489 aa17.22■□□□□ 0.35
ABCA3-206ENST00000569062 MPZL1O95297 269 aa17.22■□□□□ 0.35
ABCA3-206ENST00000569062 PPP1R3DO95685 299 aa17.22■□□□□ 0.35
ABCA3-206ENST00000569062 TXNDC12O95881 172 aa17.22■□□□□ 0.35
ABCA3-206ENST00000569062 RPS6KA3P51812 740 aa17.22■□□□□ 0.35
ABCA3-206ENST00000569062 GLO1Q04760 184 aa17.22■□□□□ 0.35
ABCA3-206ENST00000569062 TMEM255AQ5JRV8 349 aa17.22■□□□□ 0.35
ABCA3-206ENST00000569062 SYT9Q86SS6 491 aa17.22■□□□□ 0.35
ABCA3-206ENST00000569062 CCDC197Q8NCU1 140 aa17.22■□□□□ 0.35
ABCA3-206ENST00000569062 FANK1Q8TC84 345 aa17.22■□□□□ 0.35
ABCA3-206ENST00000569062 GTF3AQ92664 365 aaKnown RBP17.22■□□□□ 0.35
ABCA3-206ENST00000569062 YIPF5Q969M3 257 aa17.22■□□□□ 0.35
ABCA3-206ENST00000569062 NUAK2Q9H093 628 aa17.22■□□□□ 0.35
ABCA3-206ENST00000569062 OR52D1Q9H346 318 aa17.22■□□□□ 0.35
ABCA3-206ENST00000569062 ACTR3BQ9P1U1 418 aa17.22■□□□□ 0.35
ABCA3-206ENST00000569062 EIF3KQ9UBQ5 218 aaKnown RBP17.22■□□□□ 0.35
ABCA3-206ENST00000569062 C17orf100A8MU93 164 aa17.21■□□□□ 0.35
ABCA3-206ENST00000569062 KHDRBS3O75525 346 aaKnown RBP17.21■□□□□ 0.35
ABCA3-206ENST00000569062 NGFP01138 241 aa17.21■□□□□ 0.35
ABCA3-206ENST00000569062 TACSTD2P09758 323 aa17.21■□□□□ 0.35
ABCA3-206ENST00000569062 T-ENOLP0DO92 83 aa17.21■□□□□ 0.35
ABCA3-206ENST00000569062 IL2RGP31785 369 aa17.21■□□□□ 0.35
ABCA3-206ENST00000569062 MPV17P39210 176 aa17.21■□□□□ 0.35
ABCA3-206ENST00000569062 RFX4Q33E94 735 aa17.21■□□□□ 0.35
ABCA3-206ENST00000569062 RFPL4BQ6ZWI9 263 aa17.21■□□□□ 0.35
ABCA3-206ENST00000569062 SLC25A40Q8TBP6 338 aa17.21■□□□□ 0.35
ABCA3-206ENST00000569062 MARS2Q96GW9 593 aaKnown RBP17.21■□□□□ 0.35
ABCA3-206ENST00000569062 TSSK2Q96PF2 358 aa17.21■□□□□ 0.35
ABCA3-206ENST00000569062 ERMAPQ96PL5 475 aaPredicted RBP17.21■□□□□ 0.35
ABCA3-206ENST00000569062 OR2J1Q9GZK6 312 aa17.21■□□□□ 0.35
ABCA3-206ENST00000569062 HINT3Q9NQE9 182 aaKnown RBP17.21■□□□□ 0.35
ABCA3-206ENST00000569062 SLCO1C1Q9NYB5 712 aa17.21■□□□□ 0.35
ABCA3-206ENST00000569062 TMCC3Q9ULS5 477 aa17.21■□□□□ 0.35
ABCA3-206ENST00000569062 LOC100289279A0A1B0GTE1 492 aa17.2■□□□□ 0.34
ABCA3-206ENST00000569062 TCRBV5S2A0A599 114 aa17.2■□□□□ 0.34
ABCA3-206ENST00000569062 DCTN6O00399 190 aa17.2■□□□□ 0.34
ABCA3-206ENST00000569062 LMX1BO60663 402 aa17.2■□□□□ 0.34
ABCA3-206ENST00000569062 GPANK1O95872 356 aa17.2■□□□□ 0.34
ABCA3-206ENST00000569062 IGHV3-13P01766 116 aa17.2■□□□□ 0.34
ABCA3-206ENST00000569062 CALB2P22676 271 aa17.2■□□□□ 0.34
ABCA3-206ENST00000569062 FPR3P25089 353 aa17.2■□□□□ 0.34
ABCA3-206ENST00000569062 GSSP48637 474 aa17.2■□□□□ 0.34
ABCA3-206ENST00000569062 CHN2P52757 468 aa17.2■□□□□ 0.34
ABCA3-206ENST00000569062 DBPQ10586 325 aaPredicted RBP17.2■□□□□ 0.34
ABCA3-206ENST00000569062 ZNF718Q3SXZ3 478 aa17.2■□□□□ 0.34
ABCA3-206ENST00000569062 CHRFAM7AQ494W8 412 aa17.2■□□□□ 0.34
ABCA3-206ENST00000569062 C1orf94Q6P1W5 598 aa17.2■□□□□ 0.34
ABCA3-206ENST00000569062 ADCK1Q86TW2 530 aa17.2■□□□□ 0.34
ABCA3-206ENST00000569062 GLB1L2Q8IW92 636 aa17.2■□□□□ 0.34
ABCA3-206ENST00000569062 ABHD4Q8TB40 342 aa17.2■□□□□ 0.34
ABCA3-206ENST00000569062 SNX33Q8WV41 574 aa17.2■□□□□ 0.34
ABCA3-206ENST00000569062 IPCEF1Q8WWN9 437 aaPredicted RBP17.2■□□□□ 0.34
ABCA3-206ENST00000569062 RDH5Q92781 318 aa17.2■□□□□ 0.34
ABCA3-206ENST00000569062 C4orf45Q96LM5 186 aa17.2■□□□□ 0.34
ABCA3-206ENST00000569062 SAMD8Q96LT4 415 aa17.2■□□□□ 0.34
ABCA3-206ENST00000569062 SNX18Q96RF0 628 aa17.2■□□□□ 0.34
ABCA3-206ENST00000569062 WACQ9BTA9 647 aa17.2■□□□□ 0.34
ABCA3-206ENST00000569062 CHODLQ9H9P2 273 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms