RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 C11orf40Q8WZ69 217 aa16.17■□□□□ 0.18
SMPD3-211ENST00000568373 UPRTQ96BW1 309 aa16.17■□□□□ 0.18
SMPD3-211ENST00000568373 MARVELD1Q9BSK0 173 aa16.17■□□□□ 0.18
SMPD3-211ENST00000568373 FBXL3Q9UKT7 428 aa16.17■□□□□ 0.18
SMPD3-211ENST00000568373 CACNG2Q9Y698 323 aa16.17■□□□□ 0.18
SMPD3-211ENST00000568373 LOC102725191A0A1B0GVB3 256 aa16.17■□□□□ 0.18
SMPD3-211ENST00000568373 HMX3A6NHT5 357 aa16.17■□□□□ 0.18
SMPD3-211ENST00000568373 G3V3Y1 287 aa16.17■□□□□ 0.18
SMPD3-211ENST00000568373 GSTZ1O43708 216 aaPredicted RBP16.17■□□□□ 0.18
SMPD3-211ENST00000568373 JMJD7P0C870 316 aa16.17■□□□□ 0.18
SMPD3-211ENST00000568373 CAMK2DQ13557 499 aa16.17■□□□□ 0.18
SMPD3-211ENST00000568373 ZNF468Q5VIY5 522 aaPredicted RBP16.17■□□□□ 0.18
SMPD3-211ENST00000568373 KRT74Q7RTS7 529 aa16.17■□□□□ 0.18
SMPD3-211ENST00000568373 OR10H5Q8NGA6 315 aa16.17■□□□□ 0.18
SMPD3-211ENST00000568373 OR6X1Q8NH79 312 aa16.17■□□□□ 0.18
SMPD3-211ENST00000568373 SGCZQ96LD1 299 aa16.17■□□□□ 0.18
SMPD3-211ENST00000568373 EMC9Q9Y3B6 208 aa16.17■□□□□ 0.18
SMPD3-211ENST00000568373 ETV7Q9Y603 341 aa16.17■□□□□ 0.18
SMPD3-211ENST00000568373 RAD1O60671 282 aa16.16■□□□□ 0.18
SMPD3-211ENST00000568373 RAMP1O60894 148 aa16.16■□□□□ 0.18
SMPD3-211ENST00000568373 PMS2P2O95744 297 aa16.16■□□□□ 0.18
SMPD3-211ENST00000568373 CD3GP09693 182 aa16.16■□□□□ 0.18
SMPD3-211ENST00000568373 ZNF43P17038 809 aa16.16■□□□□ 0.18
SMPD3-211ENST00000568373 CLDN6P56747 220 aa16.16■□□□□ 0.18
SMPD3-211ENST00000568373 GPR85P60893 370 aa16.16■□□□□ 0.18
SMPD3-211ENST00000568373 Q0VFX4 171 aa16.16■□□□□ 0.18
SMPD3-211ENST00000568373 CHAF1BQ13112 559 aa16.16■□□□□ 0.18
SMPD3-211ENST00000568373 SSPNQ14714 243 aa16.16■□□□□ 0.18
SMPD3-211ENST00000568373 TATDN3Q17R31 274 aa16.16■□□□□ 0.18
SMPD3-211ENST00000568373 TIGD3Q6B0B8 471 aa16.16■□□□□ 0.18
SMPD3-211ENST00000568373 CORO6Q6QEF8 472 aa16.16■□□□□ 0.18
SMPD3-211ENST00000568373 NAXDQ8IW45 347 aa16.16■□□□□ 0.18
SMPD3-211ENST00000568373 IZUMO1Q8IYV9 350 aa16.16■□□□□ 0.18
SMPD3-211ENST00000568373 RNF133Q8WVZ7 376 aa16.16■□□□□ 0.18
SMPD3-211ENST00000568373 JSRP1Q96MG2 331 aaPredicted RBP16.16■□□□□ 0.18
SMPD3-211ENST00000568373 ZNF221Q9UK13 617 aa16.16■□□□□ 0.18
SMPD3-211ENST00000568373 DHDHQ9UQ10 334 aa16.16■□□□□ 0.18
SMPD3-211ENST00000568373 FARSAQ9Y285 508 aaKnown RBP16.16■□□□□ 0.18
SMPD3-211ENST00000568373 CDX4O14627 284 aaPredicted RBP16.15■□□□□ 0.18
SMPD3-211ENST00000568373 ZIC3O60481 467 aa16.15■□□□□ 0.18
SMPD3-211ENST00000568373 HPP00738 406 aa16.15■□□□□ 0.18
SMPD3-211ENST00000568373 CFPP27918 469 aa16.15■□□□□ 0.18
SMPD3-211ENST00000568373 LAP3P28838 519 aa16.15■□□□□ 0.18
SMPD3-211ENST00000568373 DDOSTP39656 456 aa16.15■□□□□ 0.18
SMPD3-211ENST00000568373 SRP9P49458 86 aaKnown RBP16.15■□□□□ 0.18
SMPD3-211ENST00000568373 AGFG1P52594 562 aaKnown RBP16.15■□□□□ 0.18
SMPD3-211ENST00000568373 RNASE12Q5GAN4 147 aaKnown RBP16.15■□□□□ 0.18
SMPD3-211ENST00000568373 STPG1Q5TH74 334 aa16.15■□□□□ 0.18
SMPD3-211ENST00000568373 RAET1LQ5VY80 246 aa16.15■□□□□ 0.18
SMPD3-211ENST00000568373 TOMM5Q8N4H5 51 aa16.15■□□□□ 0.18
SMPD3-211ENST00000568373 SYNPRQ8TBG9 265 aa16.15■□□□□ 0.18
SMPD3-211ENST00000568373 SMIM4Q8WVI0 70 aa16.15■□□□□ 0.18
SMPD3-211ENST00000568373 ASB5Q8WWX0 329 aa16.15■□□□□ 0.18
SMPD3-211ENST00000568373 RAB40AQ8WXH6 277 aa16.15■□□□□ 0.18
SMPD3-211ENST00000568373 LIN37Q96GY3 246 aaPredicted RBP16.15■□□□□ 0.18
SMPD3-211ENST00000568373 SPRY4Q9C004 299 aa16.15■□□□□ 0.18
SMPD3-211ENST00000568373 CYB5R1Q9UHQ9 305 aa16.15■□□□□ 0.18
SMPD3-211ENST00000568373 DKKL1Q9UK85 242 aa16.15■□□□□ 0.18
SMPD3-211ENST00000568373 KLK2P20151 261 aa16.15■□□□□ 0.18
SMPD3-211ENST00000568373 SCAND1P57086 179 aa16.15■□□□□ 0.18
SMPD3-211ENST00000568373 PLA1AQ53H76 456 aa16.15■□□□□ 0.18
SMPD3-211ENST00000568373 PRSS45Q7RTY3 260 aa16.15■□□□□ 0.18
SMPD3-211ENST00000568373 ZNF227Q86WZ6 799 aa16.15■□□□□ 0.18
SMPD3-211ENST00000568373 UBASH3BQ8TF42 649 aa16.15■□□□□ 0.18
SMPD3-211ENST00000568373 CREB3L1Q96BA8 519 aa16.15■□□□□ 0.18
SMPD3-211ENST00000568373 S100A16Q96FQ6 103 aaKnown RBP16.15■□□□□ 0.18
SMPD3-211ENST00000568373 TMEM41AQ96HV5 264 aa16.15■□□□□ 0.18
SMPD3-211ENST00000568373 G6PC2Q9NQR9 355 aa16.15■□□□□ 0.18
SMPD3-211ENST00000568373 STEAP1Q9UHE8 339 aa16.15■□□□□ 0.18
SMPD3-211ENST00000568373 CACNA1HO95180 2353 aa16.14■□□□□ 0.17
SMPD3-211ENST00000568373 OR2M5A3KFT3 312 aa16.14■□□□□ 0.17
SMPD3-211ENST00000568373 C9orf172C9J069 976 aa16.14■□□□□ 0.17
SMPD3-211ENST00000568373 H0YC42 278 aa16.14■□□□□ 0.17
SMPD3-211ENST00000568373 ORC5O43913 435 aa16.14■□□□□ 0.17
SMPD3-211ENST00000568373 CD2P06729 351 aa16.14■□□□□ 0.17
SMPD3-211ENST00000568373 H2BFMP0C1H6 154 aa16.14■□□□□ 0.17
SMPD3-211ENST00000568373 HLA-DMAP28067 261 aa16.14■□□□□ 0.17
SMPD3-211ENST00000568373 BTCP35070 178 aa16.14■□□□□ 0.17
SMPD3-211ENST00000568373 ART1P52961 327 aa16.14■□□□□ 0.17
SMPD3-211ENST00000568373 H3F3AP84243 136 aa16.14■□□□□ 0.17
SMPD3-211ENST00000568373 TBRG1Q3YBR2 411 aa16.14■□□□□ 0.17
SMPD3-211ENST00000568373 ATAD3CQ5T2N8 411 aa16.14■□□□□ 0.17
SMPD3-211ENST00000568373 ASPHD2Q6ICH7 369 aa16.14■□□□□ 0.17
SMPD3-211ENST00000568373 LRFN4Q6PJG9 635 aa16.14■□□□□ 0.17
SMPD3-211ENST00000568373 SLC7A6Q92536 515 aa16.14■□□□□ 0.17
SMPD3-211ENST00000568373 HAVCR1Q96D42 359 aa16.14■□□□□ 0.17
SMPD3-211ENST00000568373 ST6GAL2Q96JF0 529 aa16.14■□□□□ 0.17
SMPD3-211ENST00000568373 CENPMQ9NSP4 180 aa16.14■□□□□ 0.17
SMPD3-211ENST00000568373 OR52A1Q9UKL2 312 aa16.14■□□□□ 0.17
SMPD3-211ENST00000568373 TMEM269A0A1B0GVZ9 245 aa16.14■□□□□ 0.17
SMPD3-211ENST00000568373 A0A1W2PPL8 197 aa16.14■□□□□ 0.17
SMPD3-211ENST00000568373 CBR3O75828 277 aa16.14■□□□□ 0.17
SMPD3-211ENST00000568373 ISG15P05161 165 aa16.14■□□□□ 0.17
SMPD3-211ENST00000568373 ZNF17P17021 662 aa16.14■□□□□ 0.17
SMPD3-211ENST00000568373 CSRP1P21291 193 aaKnown RBP16.14■□□□□ 0.17
SMPD3-211ENST00000568373 LINGO2Q7L985 606 aa16.14■□□□□ 0.17
SMPD3-211ENST00000568373 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.14■□□□□ 0.17
SMPD3-211ENST00000568373 SERPINA12Q8IW75 414 aa16.14■□□□□ 0.17
SMPD3-211ENST00000568373 SLAMF6Q96DU3 332 aa16.14■□□□□ 0.17
SMPD3-211ENST00000568373 HHLA2Q9UM44 414 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms