RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 CRTAPO75718 401 aaPredicted RBP9.91□□□□□ -0.82
PALB2-206ENST00000568219 THY1P04216 161 aa9.91□□□□□ -0.82
PALB2-206ENST00000568219 SRSF5Q13243 272 aaKnown RBP9.91□□□□□ -0.82
PALB2-206ENST00000568219 MEF2DQ14814 521 aa9.91□□□□□ -0.82
PALB2-206ENST00000568219 INPP5JQ15735 1006 aaPredicted RBP9.91□□□□□ -0.82
PALB2-206ENST00000568219 CORO6Q6QEF8 472 aa9.91□□□□□ -0.82
PALB2-206ENST00000568219 CD99L2Q8TCZ2 262 aa9.91□□□□□ -0.82
PALB2-206ENST00000568219 PHYHIPQ92561 330 aa9.91□□□□□ -0.82
PALB2-206ENST00000568219 SLC22A18Q96BI1 424 aa9.91□□□□□ -0.82
PALB2-206ENST00000568219 CDC6Q99741 560 aa9.91□□□□□ -0.82
PALB2-206ENST00000568219 CNTNAP3Q9BZ76 1288 aa9.91□□□□□ -0.82
PALB2-206ENST00000568219 IGFLR1Q9H665 355 aa9.91□□□□□ -0.82
PALB2-206ENST00000568219 LTBP1Q14766 1721 aa9.91□□□□□ -0.82
PALB2-206ENST00000568219 P2RY10O00398 339 aa9.91□□□□□ -0.82
PALB2-206ENST00000568219 OR2A4O95047 310 aa9.91□□□□□ -0.82
PALB2-206ENST00000568219 GNB3P16520 340 aa9.91□□□□□ -0.82
PALB2-206ENST00000568219 HSD11B1P28845 292 aa9.91□□□□□ -0.82
PALB2-206ENST00000568219 CAV2P51636 162 aa9.91□□□□□ -0.82
PALB2-206ENST00000568219 PJVKQ0ZLH3 352 aa9.91□□□□□ -0.82
PALB2-206ENST00000568219 PMPCAQ10713 525 aa9.91□□□□□ -0.82
PALB2-206ENST00000568219 IAH1Q2TAA2 248 aaPredicted RBP9.91□□□□□ -0.82
PALB2-206ENST00000568219 ARHGAP11BQ3KRB8 267 aa9.91□□□□□ -0.82
PALB2-206ENST00000568219 RNF212Q495C1 297 aa9.91□□□□□ -0.82
PALB2-206ENST00000568219 DPY19L2P2Q6ZN68 376 aa9.91□□□□□ -0.82
PALB2-206ENST00000568219 ZAR1Q86SH2 424 aa9.91□□□□□ -0.82
PALB2-206ENST00000568219 OR9A4Q8NGU2 314 aa9.91□□□□□ -0.82
PALB2-206ENST00000568219 FAM213BQ8TBF2 198 aa9.91□□□□□ -0.82
PALB2-206ENST00000568219 FGGYQ96C11 551 aa9.91□□□□□ -0.82
PALB2-206ENST00000568219 OR2A7Q96R45 310 aa9.91□□□□□ -0.82
PALB2-206ENST00000568219 DMRTA2Q96SC8 542 aa9.91□□□□□ -0.82
PALB2-206ENST00000568219 ADOQ96SZ5 270 aa9.91□□□□□ -0.82
PALB2-206ENST00000568219 SUCNR1Q9BXA5 334 aa9.91□□□□□ -0.82
PALB2-206ENST00000568219 TMPRSS13Q9BYE2 586 aa9.91□□□□□ -0.82
PALB2-206ENST00000568219 BANF2Q9H503 90 aa9.91□□□□□ -0.82
PALB2-206ENST00000568219 LHX9Q9NQ69 397 aa9.91□□□□□ -0.82
PALB2-206ENST00000568219 LRIT1Q9P2V4 623 aa9.91□□□□□ -0.82
PALB2-206ENST00000568219 RP1L1Q8IWN7 2480 aaPredicted RBP9.91□□□□□ -0.82
PALB2-206ENST00000568219 GREB1Q4ZG55 1949 aa9.91□□□□□ -0.82
PALB2-206ENST00000568219 BORCS7-ASMTA0A0B4J1R7 106 aa9.91□□□□□ -0.82
PALB2-206ENST00000568219 GPR75O95800 540 aa9.91□□□□□ -0.82
PALB2-206ENST00000568219 IL12BP29460 328 aa9.91□□□□□ -0.82
PALB2-206ENST00000568219 SOHLH1Q5JUK2 328 aa9.91□□□□□ -0.82
PALB2-206ENST00000568219 ATPAF1Q5TC12 328 aaPredicted RBP9.91□□□□□ -0.82
PALB2-206ENST00000568219 C5orf46Q6UWT4 87 aa9.91□□□□□ -0.82
PALB2-206ENST00000568219 NXPE3Q969Y0 559 aa9.91□□□□□ -0.82
PALB2-206ENST00000568219 HHLA2Q9UM44 414 aa9.91□□□□□ -0.82
PALB2-206ENST00000568219 HCFC2Q9Y5Z7 792 aa9.91□□□□□ -0.82
PALB2-206ENST00000568219 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.9□□□□□ -0.82
PALB2-206ENST00000568219 CTDSPLO15194 276 aa9.9□□□□□ -0.82
PALB2-206ENST00000568219 OGG1O15527 345 aa9.9□□□□□ -0.82
PALB2-206ENST00000568219 NSA2O95478 260 aaKnown RBP9.9□□□□□ -0.82
PALB2-206ENST00000568219 CD14P08571 375 aa9.9□□□□□ -0.82
PALB2-206ENST00000568219 ST6GAL1P15907 406 aa9.9□□□□□ -0.82
PALB2-206ENST00000568219 ID4P47928 161 aa9.9□□□□□ -0.82
PALB2-206ENST00000568219 RAB5CP51148 216 aa9.9□□□□□ -0.82
PALB2-206ENST00000568219 RPS15AP62244 130 aaKnown RBP9.9□□□□□ -0.82
PALB2-206ENST00000568219 SRSF3P84103 164 aaKnown RBP9.9□□□□□ -0.82
PALB2-206ENST00000568219 DEFB115Q30KQ5 88 aa9.9□□□□□ -0.82
PALB2-206ENST00000568219 SLC39A5Q6ZMH5 540 aa9.9□□□□□ -0.82
PALB2-206ENST00000568219 TMPRSS11FQ6ZWK6 438 aa9.9□□□□□ -0.82
PALB2-206ENST00000568219 ZNF485Q8NCK3 441 aa9.9□□□□□ -0.82
PALB2-206ENST00000568219 THAP3Q8WTV1 239 aaPredicted RBP9.9□□□□□ -0.82
PALB2-206ENST00000568219 CCDC74AQ96AQ1 378 aa9.9□□□□□ -0.82
PALB2-206ENST00000568219 PITHD1Q9GZP4 211 aaPredicted RBP9.9□□□□□ -0.82
PALB2-206ENST00000568219 TOLLIPQ9H0E2 274 aa9.9□□□□□ -0.82
PALB2-206ENST00000568219 SEMA6CQ9H3T2 930 aa9.9□□□□□ -0.82
PALB2-206ENST00000568219 GSN-AS1Q9NRJ2 163 aa9.9□□□□□ -0.82
PALB2-206ENST00000568219 FRRS1LQ9P0K9 344 aa9.9□□□□□ -0.82
PALB2-206ENST00000568219 CYP8B1Q9UNU6 501 aa9.9□□□□□ -0.82
PALB2-206ENST00000568219 AMDHD2Q9Y303 409 aa9.9□□□□□ -0.82
PALB2-206ENST00000568219 OR2M5A3KFT3 312 aa9.9□□□□□ -0.82
PALB2-206ENST00000568219 UMAD1C9J7I0 102 aa9.9□□□□□ -0.82
PALB2-206ENST00000568219 SYT7O43581 403 aa9.9□□□□□ -0.82
PALB2-206ENST00000568219 NDUFS6O75380 124 aaKnown RBP9.9□□□□□ -0.82
PALB2-206ENST00000568219 CD63P08962 238 aa9.9□□□□□ -0.82
PALB2-206ENST00000568219 SLC2A1P11166 492 aa9.9□□□□□ -0.82
PALB2-206ENST00000568219 CDKN2AP42771 156 aaKnown RBP9.9□□□□□ -0.82
PALB2-206ENST00000568219 HNF4GQ14541 408 aa9.9□□□□□ -0.82
PALB2-206ENST00000568219 SUMF2Q8NBJ7 301 aa9.9□□□□□ -0.82
PALB2-206ENST00000568219 OR5T1Q8NG75 326 aa9.9□□□□□ -0.82
PALB2-206ENST00000568219 OR10D4PQ8NGN7 298 aa9.9□□□□□ -0.82
PALB2-206ENST00000568219 WDR34Q96EX3 536 aa9.9□□□□□ -0.82
PALB2-206ENST00000568219 MMABQ96EY8 250 aaPredicted RBP9.9□□□□□ -0.82
PALB2-206ENST00000568219 LHX6Q9UPM6 363 aa9.9□□□□□ -0.82
PALB2-206ENST00000568219 WIF1Q9Y5W5 379 aa9.9□□□□□ -0.82
PALB2-206ENST00000568219 ICOSLGO75144 302 aa9.9□□□□□ -0.82
PALB2-206ENST00000568219 SERPINA2P20848 420 aa9.9□□□□□ -0.82
PALB2-206ENST00000568219 PPM1AP35813 382 aa9.9□□□□□ -0.82
PALB2-206ENST00000568219 CCR2P41597 374 aa9.9□□□□□ -0.82
PALB2-206ENST00000568219 HAAOP46952 286 aa9.9□□□□□ -0.82
PALB2-206ENST00000568219 F2RL1P55085 397 aa9.9□□□□□ -0.82
PALB2-206ENST00000568219 C1orf61Q13536 156 aa9.9□□□□□ -0.82
PALB2-206ENST00000568219 C21orf62-AS1Q17RA5 79 aa9.9□□□□□ -0.82
PALB2-206ENST00000568219 HNRNPA1L2Q32P51 320 aaKnown RBP9.9□□□□□ -0.82
PALB2-206ENST00000568219 ANKRD16Q6P6B7 361 aa9.9□□□□□ -0.82
PALB2-206ENST00000568219 ZNF600Q6ZNG1 722 aa9.9□□□□□ -0.82
PALB2-206ENST00000568219 SLC16A9Q7RTY1 509 aa9.9□□□□□ -0.82
PALB2-206ENST00000568219 OR5M8Q8NGP6 311 aa9.9□□□□□ -0.82
PALB2-206ENST00000568219 WDR13Q9H1Z4 485 aa9.9□□□□□ -0.82
PALB2-206ENST00000568219 EPHX3Q9H6B9 360 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms