RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 CD47Q08722 323 aa13.01□□□□□ -0.33
PALB2-205ENST00000567003 PSG7Q13046 419 aa13.01□□□□□ -0.33
PALB2-205ENST00000567003 TOP3AQ13472 1001 aaPredicted RBP13.01□□□□□ -0.33
PALB2-205ENST00000567003 TAF11Q15544 211 aa13.01□□□□□ -0.33
PALB2-205ENST00000567003 CYP51A1Q16850 503 aa13.01□□□□□ -0.33
PALB2-205ENST00000567003 AGKQ53H12 422 aa13.01□□□□□ -0.33
PALB2-205ENST00000567003 MTX3Q5HYI7 312 aa13.01□□□□□ -0.33
PALB2-205ENST00000567003 ARMC4Q5T2S8 1044 aa13.01□□□□□ -0.33
PALB2-205ENST00000567003 ZNF774Q6NX45 483 aa13.01□□□□□ -0.33
PALB2-205ENST00000567003 DLEU7Q6UYE1 221 aa13.01□□□□□ -0.33
PALB2-205ENST00000567003 Q6ZR03 302 aa13.01□□□□□ -0.33
PALB2-205ENST00000567003 LRRC28Q86X40 367 aaPredicted RBP13.01□□□□□ -0.33
PALB2-205ENST00000567003 NKAIN4Q8IVV8 208 aa13.01□□□□□ -0.33
PALB2-205ENST00000567003 KLHL36Q8N4N3 616 aa13.01□□□□□ -0.33
PALB2-205ENST00000567003 C11orf65Q8NCR3 313 aa13.01□□□□□ -0.33
PALB2-205ENST00000567003 OR2Z1Q8NG97 314 aa13.01□□□□□ -0.33
PALB2-205ENST00000567003 OR52E2Q8NGJ4 325 aa13.01□□□□□ -0.33
PALB2-205ENST00000567003 ITLN1Q8WWA0 313 aa13.01□□□□□ -0.33
PALB2-205ENST00000567003 TAMM41Q96BW9 452 aa13.01□□□□□ -0.33
PALB2-205ENST00000567003 SIGLEC11Q96RL6 698 aa13.01□□□□□ -0.33
PALB2-205ENST00000567003 DIRC2Q96SL1 478 aa13.01□□□□□ -0.33
PALB2-205ENST00000567003 SLITRK2Q9H156 845 aa13.01□□□□□ -0.33
PALB2-205ENST00000567003 TNFRSF19Q9NS68 423 aa13.01□□□□□ -0.33
PALB2-205ENST00000567003 C20orf141Q9NUB4 165 aa13.01□□□□□ -0.33
PALB2-205ENST00000567003 PDP1Q9P0J1 537 aaPredicted RBP13.01□□□□□ -0.33
PALB2-205ENST00000567003 ZDHHC8Q9ULC8 765 aa13.01□□□□□ -0.33
PALB2-205ENST00000567003 CORO2BQ9UQ03 480 aa13.01□□□□□ -0.33
PALB2-205ENST00000567003 GMEB1Q9Y692 573 aa13.01□□□□□ -0.33
PALB2-205ENST00000567003 A8MXK9 166 aa13□□□□□ -0.33
PALB2-205ENST00000567003 CLDN34H7C241 214 aa13□□□□□ -0.33
PALB2-205ENST00000567003 POLR3GO15318 223 aaPredicted RBP13□□□□□ -0.33
PALB2-205ENST00000567003 OR7A10O76100 309 aa13□□□□□ -0.33
PALB2-205ENST00000567003 ZNF205O95201 554 aa13□□□□□ -0.33
PALB2-205ENST00000567003 TNFRSF1BP20333 461 aa13□□□□□ -0.33
PALB2-205ENST00000567003 ERFP50548 548 aa13□□□□□ -0.33
PALB2-205ENST00000567003 PAX8Q06710 450 aa13□□□□□ -0.33
PALB2-205ENST00000567003 CDK5R2Q13319 367 aa13□□□□□ -0.33
PALB2-205ENST00000567003 TMEM155Q4W5P6 130 aa13□□□□□ -0.33
PALB2-205ENST00000567003 RUNDC3AQ59EK9 446 aa13□□□□□ -0.33
PALB2-205ENST00000567003 SLC25A47Q6Q0C1 308 aa13□□□□□ -0.33
PALB2-205ENST00000567003 ZNF283Q8N7M2 679 aa13□□□□□ -0.33
PALB2-205ENST00000567003 TMEM255BQ8WV15 326 aa13□□□□□ -0.33
PALB2-205ENST00000567003 MPP4Q96JB8 637 aa13□□□□□ -0.33
PALB2-205ENST00000567003 PARD6BQ9BYG5 372 aa13□□□□□ -0.33
PALB2-205ENST00000567003 SLC19A3Q9BZV2 496 aa13□□□□□ -0.33
PALB2-205ENST00000567003 NANOGQ9H9S0 305 aa13□□□□□ -0.33
PALB2-205ENST00000567003 OR5V1Q9UGF6 321 aa13□□□□□ -0.33
PALB2-205ENST00000567003 TRAV40A0A0B4J280 105 aa12.99□□□□□ -0.33
PALB2-205ENST00000567003 CEACAM18A8MTB9 384 aa12.99□□□□□ -0.33
PALB2-205ENST00000567003 CENPBD1B2RD01 187 aa12.99□□□□□ -0.33
PALB2-205ENST00000567003 HOXA3O43365 443 aaPredicted RBP12.99□□□□□ -0.33
PALB2-205ENST00000567003 SHOX2O60902 331 aaPredicted RBP12.99□□□□□ -0.33
PALB2-205ENST00000567003 LIPAP38571 399 aa12.99□□□□□ -0.33
PALB2-205ENST00000567003 IDH3AP50213 366 aa12.99□□□□□ -0.33
PALB2-205ENST00000567003 LAPTM4AQ15012 233 aa12.99□□□□□ -0.33
PALB2-205ENST00000567003 ESCO2Q56NI9 601 aa12.99□□□□□ -0.33
PALB2-205ENST00000567003 KIR3DL3Q8N743 410 aa12.99□□□□□ -0.33
PALB2-205ENST00000567003 SGTBQ96EQ0 304 aa12.99□□□□□ -0.33
PALB2-205ENST00000567003 C4orf45Q96LM5 186 aa12.99□□□□□ -0.33
PALB2-205ENST00000567003 CGGBP1Q9UFW8 167 aaPredicted RBP12.99□□□□□ -0.33
PALB2-205ENST00000567003 DOCK11Q5JSL3 2073 aa12.98□□□□□ -0.33
PALB2-205ENST00000567003 A0A1W2PPL8 197 aa12.98□□□□□ -0.33
PALB2-205ENST00000567003 H3BSA7 217 aa12.98□□□□□ -0.33
PALB2-205ENST00000567003 PIP5K1CO60331 668 aa12.98□□□□□ -0.33
PALB2-205ENST00000567003 ERLIN1O75477 346 aa12.98□□□□□ -0.33
PALB2-205ENST00000567003 TGDSO95455 350 aa12.98□□□□□ -0.33
PALB2-205ENST00000567003 MT-ND1P03886 318 aa12.98□□□□□ -0.33
PALB2-205ENST00000567003 SCG5P05408 212 aa12.98□□□□□ -0.33
PALB2-205ENST00000567003 THRBP10828 461 aa12.98□□□□□ -0.33
PALB2-205ENST00000567003 MTNR1AP48039 350 aa12.98□□□□□ -0.33
PALB2-205ENST00000567003 CRYBA2P53672 197 aa12.98□□□□□ -0.33
PALB2-205ENST00000567003 MAGOHP61326 146 aaKnown RBP12.98□□□□□ -0.33
PALB2-205ENST00000567003 PAX2Q02962 417 aa12.98□□□□□ -0.33
PALB2-205ENST00000567003 DEFB112Q30KQ8 113 aa12.98□□□□□ -0.33
PALB2-205ENST00000567003 ZMAT1Q5H9K5 638 aa12.98□□□□□ -0.33
PALB2-205ENST00000567003 FAM27BQ5VT28 67 aa12.98□□□□□ -0.33
PALB2-205ENST00000567003 C16orf87Q6PH81 154 aa12.98□□□□□ -0.33
PALB2-205ENST00000567003 BRD3OSQ6XYD6 125 aa12.98□□□□□ -0.33
PALB2-205ENST00000567003 HDDC2Q7Z4H3 204 aa12.98□□□□□ -0.33
PALB2-205ENST00000567003 DHDDSQ86SQ9 333 aa12.98□□□□□ -0.33
PALB2-205ENST00000567003 IGFN1Q86VF2 1251 aa12.98□□□□□ -0.33
PALB2-205ENST00000567003 WFDC12Q8WWY7 111 aa12.98□□□□□ -0.33
PALB2-205ENST00000567003 PCDHAC1Q9H158 963 aa12.98□□□□□ -0.33
PALB2-205ENST00000567003 ELOVL3Q9HB03 270 aa12.98□□□□□ -0.33
PALB2-205ENST00000567003 NKIRAS1Q9NYS0 192 aa12.98□□□□□ -0.33
PALB2-205ENST00000567003 IGHV3-64DA0A0J9YX35 117 aa12.97□□□□□ -0.33
PALB2-205ENST00000567003 FAM181BA6NEQ2 426 aa12.97□□□□□ -0.33
PALB2-205ENST00000567003 ABHD16AO95870 558 aa12.97□□□□□ -0.33
PALB2-205ENST00000567003 PLATP00750 562 aa12.97□□□□□ -0.33
PALB2-205ENST00000567003 KNG1P01042 644 aa12.97□□□□□ -0.33
PALB2-205ENST00000567003 CST2P09228 141 aa12.97□□□□□ -0.33
PALB2-205ENST00000567003 MDH2P40926 338 aaKnown RBP12.97□□□□□ -0.33
PALB2-205ENST00000567003 MMP16P51512 607 aa12.97□□□□□ -0.33
PALB2-205ENST00000567003 ARHGDIAP52565 204 aa12.97□□□□□ -0.33
PALB2-205ENST00000567003 ENDOGQ14249 297 aaKnown RBP12.97□□□□□ -0.33
PALB2-205ENST00000567003 OTPQ5XKR4 325 aa12.97□□□□□ -0.33
PALB2-205ENST00000567003 UNQ6126/PRO20091Q6UXV3 157 aa12.97□□□□□ -0.33
PALB2-205ENST00000567003 C9orf139Q6ZV77 190 aa12.97□□□□□ -0.33
PALB2-205ENST00000567003 POU5F2Q8N7G0 328 aa12.97□□□□□ -0.33
PALB2-205ENST00000567003 ZNF420Q8TAQ5 688 aaPredicted RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms