RNA–Protein interactions for RNA: ENST00000565634.5

UBFD1-204, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 724 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-204ENST00000565634 B3GLCTQ6Y288 498 aa5.36□□□□□ -1.55
UBFD1-204ENST00000565634 PTCHD4Q6ZW05 846 aa5.36□□□□□ -1.55
UBFD1-204ENST00000565634 CREB3L2Q70SY1 520 aa5.36□□□□□ -1.55
UBFD1-204ENST00000565634 OAFQ86UD1 273 aa5.36□□□□□ -1.55
UBFD1-204ENST00000565634 GPAT4Q86UL3 456 aa5.36□□□□□ -1.55
UBFD1-204ENST00000565634 RNF113BQ8IZP6 322 aaKnown RBP5.36□□□□□ -1.55
UBFD1-204ENST00000565634 OR9K2Q8NGE7 335 aa5.36□□□□□ -1.55
UBFD1-204ENST00000565634 OR5J2Q8NH18 312 aa5.36□□□□□ -1.55
UBFD1-204ENST00000565634 PIGXQ8TBF5 258 aa5.36□□□□□ -1.55
UBFD1-204ENST00000565634 GNPDA2Q8TDQ7 276 aa5.36□□□□□ -1.55
UBFD1-204ENST00000565634 LIPHQ8WWY8 451 aa5.36□□□□□ -1.55
UBFD1-204ENST00000565634 RASD2Q96D21 266 aa5.36□□□□□ -1.55
UBFD1-204ENST00000565634 Q96M85 177 aa5.36□□□□□ -1.55
UBFD1-204ENST00000565634 FOXN4Q96NZ1 517 aa5.36□□□□□ -1.55
UBFD1-204ENST00000565634 TSSK2Q96PF2 358 aa5.36□□□□□ -1.55
UBFD1-204ENST00000565634 DDOQ99489 341 aa5.36□□□□□ -1.55
UBFD1-204ENST00000565634 PSD2Q9BQI7 771 aa5.36□□□□□ -1.55
UBFD1-204ENST00000565634 MED18Q9BUE0 208 aa5.36□□□□□ -1.55
UBFD1-204ENST00000565634 OSBPL10Q9BXB5 764 aa5.36□□□□□ -1.55
UBFD1-204ENST00000565634 HCAR1Q9BXC0 346 aa5.36□□□□□ -1.55
UBFD1-204ENST00000565634 DGCR6LQ9BY27 220 aa5.36□□□□□ -1.55
UBFD1-204ENST00000565634 POLR2J2Q9GZM3 115 aaKnown RBP5.36□□□□□ -1.55
UBFD1-204ENST00000565634 POLR2J3Q9H1A7 115 aaKnown RBP5.36□□□□□ -1.55
UBFD1-204ENST00000565634 OPN3Q9H1Y3 402 aaPredicted RBP5.36□□□□□ -1.55
UBFD1-204ENST00000565634 SLCO5A1Q9H2Y9 848 aa5.36□□□□□ -1.55
UBFD1-204ENST00000565634 EVA1AQ9H8M9 152 aa5.36□□□□□ -1.55
UBFD1-204ENST00000565634 RNF122Q9H9V4 155 aa5.36□□□□□ -1.55
UBFD1-204ENST00000565634 CALHM2Q9HA72 323 aa5.36□□□□□ -1.55
UBFD1-204ENST00000565634 NANSQ9NR45 359 aa5.36□□□□□ -1.55
UBFD1-204ENST00000565634 ZNF701Q9NV72 531 aaPredicted RBP5.36□□□□□ -1.55
UBFD1-204ENST00000565634 MRPL39Q9NYK5 338 aaKnown RBP5.36□□□□□ -1.55
UBFD1-204ENST00000565634 TMCC3Q9ULS5 477 aa5.36□□□□□ -1.55
UBFD1-204ENST00000565634 PCDHGB5Q9Y5G0 923 aa5.36□□□□□ -1.55
UBFD1-204ENST00000565634 IER3IP1Q9Y5U9 82 aa5.36□□□□□ -1.55
UBFD1-204ENST00000565634 TRRAPQ9Y4A5 3859 aa5.36□□□□□ -1.55
UBFD1-204ENST00000565634 PRKDCP78527 4128 aaKnown RBP5.36□□□□□ -1.55
UBFD1-204ENST00000565634 A0A1W2PNV4 684 aa5.35□□□□□ -1.55
UBFD1-204ENST00000565634 A0A1W2PPL8 197 aa5.35□□□□□ -1.55
UBFD1-204ENST00000565634 MBD3L3A6NE82 208 aaPredicted RBP5.35□□□□□ -1.55
UBFD1-204ENST00000565634 CD8B2A6NJW9 211 aa5.35□□□□□ -1.55
UBFD1-204ENST00000565634 H7C1C5 153 aa5.35□□□□□ -1.55
UBFD1-204ENST00000565634 DCTN6O00399 190 aa5.35□□□□□ -1.55
UBFD1-204ENST00000565634 EI24O14681 340 aa5.35□□□□□ -1.55
UBFD1-204ENST00000565634 E2F6O75461 281 aa5.35□□□□□ -1.55
UBFD1-204ENST00000565634 UPK3AO75631 287 aa5.35□□□□□ -1.55
UBFD1-204ENST00000565634 ZNF432O94892 652 aa5.35□□□□□ -1.55
UBFD1-204ENST00000565634 RCBTB2O95199 551 aa5.35□□□□□ -1.55
UBFD1-204ENST00000565634 VENTXO95231 258 aa5.35□□□□□ -1.55
UBFD1-204ENST00000565634 AHSA1O95433 338 aa5.35□□□□□ -1.55
UBFD1-204ENST00000565634 PPP1R3DO95685 299 aa5.35□□□□□ -1.55
UBFD1-204ENST00000565634 CLIC3O95833 236 aa5.35□□□□□ -1.55
UBFD1-204ENST00000565634 IGHV4-39P01824 125 aa5.35□□□□□ -1.55
UBFD1-204ENST00000565634 ALPLP05186 524 aa5.35□□□□□ -1.55
UBFD1-204ENST00000565634 SAGP10523 405 aaPredicted RBP5.35□□□□□ -1.55
UBFD1-204ENST00000565634 CLUP10909 449 aa5.35□□□□□ -1.55
UBFD1-204ENST00000565634 ZNF23P17027 643 aa5.35□□□□□ -1.55
UBFD1-204ENST00000565634 AHCYP23526 432 aa5.35□□□□□ -1.55
UBFD1-204ENST00000565634 POU1F1P28069 291 aa5.35□□□□□ -1.55
UBFD1-204ENST00000565634 TIMP3P35625 211 aa5.35□□□□□ -1.55
UBFD1-204ENST00000565634 SLC9A3P48764 834 aa5.35□□□□□ -1.55
UBFD1-204ENST00000565634 BIDP55957 195 aa5.35□□□□□ -1.55
UBFD1-204ENST00000565634 CLDN17P56750 224 aa5.35□□□□□ -1.55
UBFD1-204ENST00000565634 SMIM11AP58511 58 aa5.35□□□□□ -1.55
UBFD1-204ENST00000565634 LCN6P62502 163 aa5.35□□□□□ -1.55
UBFD1-204ENST00000565634 RPS4XP62701 263 aaKnown RBP5.35□□□□□ -1.55
UBFD1-204ENST00000565634 SORDQ00796 357 aa5.35□□□□□ -1.55
UBFD1-204ENST00000565634 IL1RL1Q01638 556 aa5.35□□□□□ -1.55
UBFD1-204ENST00000565634 SLC34A1Q06495 639 aa5.35□□□□□ -1.55
UBFD1-204ENST00000565634 TSPAN31Q12999 210 aa5.35□□□□□ -1.55
UBFD1-204ENST00000565634 CAMK2DQ13557 499 aa5.35□□□□□ -1.55
UBFD1-204ENST00000565634 GK3PQ14409 553 aa5.35□□□□□ -1.55
UBFD1-204ENST00000565634 GINS1Q14691 196 aa5.35□□□□□ -1.55
UBFD1-204ENST00000565634 RFX4Q33E94 735 aa5.35□□□□□ -1.55
UBFD1-204ENST00000565634 SLC36A3Q495N2 470 aa5.35□□□□□ -1.55
UBFD1-204ENST00000565634 FAM120AOSQ5T036 256 aa5.35□□□□□ -1.55
UBFD1-204ENST00000565634 ARMC4Q5T2S8 1044 aa5.35□□□□□ -1.55
UBFD1-204ENST00000565634 OGFRL1Q5TC84 451 aaPredicted RBP5.35□□□□□ -1.55
UBFD1-204ENST00000565634 C9orf135Q5VTT2 229 aa5.35□□□□□ -1.55
UBFD1-204ENST00000565634 TMEM225Q6GV28 225 aa5.35□□□□□ -1.55
UBFD1-204ENST00000565634 ABLIM2Q6H8Q1 611 aa5.35□□□□□ -1.55
UBFD1-204ENST00000565634 ZFP1Q6P2D0 407 aa5.35□□□□□ -1.55
UBFD1-204ENST00000565634 MZT2AQ6P582 158 aa5.35□□□□□ -1.55
UBFD1-204ENST00000565634 ZNF474Q6S9Z5 364 aaPredicted RBP5.35□□□□□ -1.55
UBFD1-204ENST00000565634 PAQR6Q6TCH4 344 aa5.35□□□□□ -1.55
UBFD1-204ENST00000565634 RRM2BQ7LG56 351 aa5.35□□□□□ -1.55
UBFD1-204ENST00000565634 C10orf67Q8IYJ2 551 aa5.35□□□□□ -1.55
UBFD1-204ENST00000565634 ATG16L2Q8NAA4 619 aa5.35□□□□□ -1.55
UBFD1-204ENST00000565634 SYT14Q8NB59 555 aa5.35□□□□□ -1.55
UBFD1-204ENST00000565634 SGMS2Q8NHU3 365 aa5.35□□□□□ -1.55
UBFD1-204ENST00000565634 MBD3L2Q8NHZ7 208 aaPredicted RBP5.35□□□□□ -1.55
UBFD1-204ENST00000565634 MAGEE2Q8TD90 523 aaPredicted RBP5.35□□□□□ -1.55
UBFD1-204ENST00000565634 RNF128Q8TEB7 428 aa5.35□□□□□ -1.55
UBFD1-204ENST00000565634 SMAP2Q8WU79 429 aaPredicted RBP5.35□□□□□ -1.55
UBFD1-204ENST00000565634 SLC25A43Q8WUT9 341 aaPredicted RBP5.35□□□□□ -1.55
UBFD1-204ENST00000565634 HDAC2Q92769 488 aaKnown RBP5.35□□□□□ -1.55
UBFD1-204ENST00000565634 PTP4A1Q93096 173 aa5.35□□□□□ -1.55
UBFD1-204ENST00000565634 OXGR1Q96P68 337 aa5.35□□□□□ -1.55
UBFD1-204ENST00000565634 TSPAN32Q96QS1 320 aa5.35□□□□□ -1.55
UBFD1-204ENST00000565634 PRRG4Q9BZD6 226 aa5.35□□□□□ -1.55
UBFD1-204ENST00000565634 OR52D1Q9H346 318 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms