RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 MEP1BQ16820 701 aa9.76□□□□□ -0.85
SF3B3-205ENST00000564899 CEACAM16Q2WEN9 425 aa9.76□□□□□ -0.85
SF3B3-205ENST00000564899 RNLSQ5VYX0 342 aa9.76□□□□□ -0.85
SF3B3-205ENST00000564899 FOXL2NBQ6ZUU3 175 aa9.76□□□□□ -0.85
SF3B3-205ENST00000564899 KCTD8Q6ZWB6 473 aa9.76□□□□□ -0.85
SF3B3-205ENST00000564899 LINGO2Q7L985 606 aa9.76□□□□□ -0.85
SF3B3-205ENST00000564899 UBE2J2Q8N2K1 259 aa9.76□□□□□ -0.85
SF3B3-205ENST00000564899 ACBD7Q8N6N7 88 aa9.76□□□□□ -0.85
SF3B3-205ENST00000564899 OR2T27Q8NH04 317 aa9.76□□□□□ -0.85
SF3B3-205ENST00000564899 SMAP2Q8WU79 429 aaPredicted RBP9.76□□□□□ -0.85
SF3B3-205ENST00000564899 C11orf40Q8WZ69 217 aa9.76□□□□□ -0.85
SF3B3-205ENST00000564899 POM121Q96HA1 1249 aa9.76□□□□□ -0.85
SF3B3-205ENST00000564899 ZFP3Q96NJ6 502 aa9.76□□□□□ -0.85
SF3B3-205ENST00000564899 TTYH2Q9BSA4 534 aa9.76□□□□□ -0.85
SF3B3-205ENST00000564899 JAM3Q9BX67 310 aa9.76□□□□□ -0.85
SF3B3-205ENST00000564899 YIPF3Q9GZM5 350 aa9.76□□□□□ -0.85
SF3B3-205ENST00000564899 WDR76Q9H967 626 aa9.76□□□□□ -0.85
SF3B3-205ENST00000564899 GPR35Q9HC97 309 aa9.76□□□□□ -0.85
SF3B3-205ENST00000564899 POLE4Q9NR33 117 aa9.76□□□□□ -0.85
SF3B3-205ENST00000564899 INPP5EQ9NRR6 644 aa9.76□□□□□ -0.85
SF3B3-205ENST00000564899 PRSS50Q9UI38 385 aa9.76□□□□□ -0.85
SF3B3-205ENST00000564899 ERGIC3Q9Y282 383 aa9.76□□□□□ -0.85
SF3B3-205ENST00000564899 POLR1DQ9Y2S0 133 aa9.76□□□□□ -0.85
SF3B3-205ENST00000564899 UGT2A1Q9Y4X1 527 aa9.76□□□□□ -0.85
SF3B3-205ENST00000564899 VPS13CQ709C8 3753 aa9.75□□□□□ -0.85
SF3B3-205ENST00000564899 TRGV8A0A0C4DH27 118 aa9.75□□□□□ -0.85
SF3B3-205ENST00000564899 DAPL1A0PJW8 107 aa9.75□□□□□ -0.85
SF3B3-205ENST00000564899 ZNF593O00488 134 aaPredicted RBP9.75□□□□□ -0.85
SF3B3-205ENST00000564899 TOXO94900 526 aa9.75□□□□□ -0.85
SF3B3-205ENST00000564899 PTHP01270 115 aa9.75□□□□□ -0.85
SF3B3-205ENST00000564899 LIMS3P0CW19 117 aa9.75□□□□□ -0.85
SF3B3-205ENST00000564899 LIMS4P0CW20 117 aa9.75□□□□□ -0.85
SF3B3-205ENST00000564899 PCMT1P22061 227 aa9.75□□□□□ -0.85
SF3B3-205ENST00000564899 ETV1P50549 477 aa9.75□□□□□ -0.85
SF3B3-205ENST00000564899 HCCSP53701 268 aa9.75□□□□□ -0.85
SF3B3-205ENST00000564899 CASP6P55212 293 aa9.75□□□□□ -0.85
SF3B3-205ENST00000564899 EMX1Q04741 257 aaPredicted RBP9.75□□□□□ -0.85
SF3B3-205ENST00000564899 STK11Q15831 433 aa9.75□□□□□ -0.85
SF3B3-205ENST00000564899 NEDD8Q15843 81 aa9.75□□□□□ -0.85
SF3B3-205ENST00000564899 SGCAQ16586 387 aa9.75□□□□□ -0.85
SF3B3-205ENST00000564899 FBXW9Q5XUX1 488 aa9.75□□□□□ -0.85
SF3B3-205ENST00000564899 VWA1Q6PCB0 445 aa9.75□□□□□ -0.85
SF3B3-205ENST00000564899 TFAP2EQ6VUC0 442 aa9.75□□□□□ -0.85
SF3B3-205ENST00000564899 DPY19L4Q7Z388 723 aa9.75□□□□□ -0.85
SF3B3-205ENST00000564899 ABHD12BQ7Z5M8 362 aaPredicted RBP9.75□□□□□ -0.85
SF3B3-205ENST00000564899 CDC20BQ86Y33 519 aa9.75□□□□□ -0.85
SF3B3-205ENST00000564899 ZNF295-AS1Q8N0V1 137 aa9.75□□□□□ -0.85
SF3B3-205ENST00000564899 ITLN2Q8WWU7 325 aaPredicted RBP9.75□□□□□ -0.85
SF3B3-205ENST00000564899 HTRA1Q92743 480 aa9.75□□□□□ -0.85
SF3B3-205ENST00000564899 ZNF837Q96EG3 531 aaPredicted RBP9.75□□□□□ -0.85
SF3B3-205ENST00000564899 MNTQ99583 582 aa9.75□□□□□ -0.85
SF3B3-205ENST00000564899 FOXB1Q99853 325 aa9.75□□□□□ -0.85
SF3B3-205ENST00000564899 ALG8Q9BVK2 526 aa9.75□□□□□ -0.85
SF3B3-205ENST00000564899 MND1Q9BWT6 205 aa9.75□□□□□ -0.85
SF3B3-205ENST00000564899 NELFAQ9H3P2 528 aa9.75□□□□□ -0.85
SF3B3-205ENST00000564899 EMC7Q9NPA0 242 aa9.75□□□□□ -0.85
SF3B3-205ENST00000564899 ACOT13Q9NPJ3 140 aa9.75□□□□□ -0.85
SF3B3-205ENST00000564899 TMEM38BQ9NVV0 291 aa9.75□□□□□ -0.85
SF3B3-205ENST00000564899 ERVK13-1Q9NX77 482 aa9.75□□□□□ -0.85
SF3B3-205ENST00000564899 MALT1Q9UDY8 824 aa9.75□□□□□ -0.85
SF3B3-205ENST00000564899 CLEC2DQ9UHP7 191 aa9.75□□□□□ -0.85
SF3B3-205ENST00000564899 KCNG2Q9UJ96 466 aa9.75□□□□□ -0.85
SF3B3-205ENST00000564899 PROCRQ9UNN8 238 aa9.75□□□□□ -0.85
SF3B3-205ENST00000564899 COPS3Q9UNS2 423 aa9.75□□□□□ -0.85
SF3B3-205ENST00000564899 ACANP16112 2415 aa9.74□□□□□ -0.85
SF3B3-205ENST00000564899 A0A1W2PQL4 384 aaPredicted RBP9.74□□□□□ -0.85
SF3B3-205ENST00000564899 TMEM129A0AVI4 362 aa9.74□□□□□ -0.85
SF3B3-205ENST00000564899 RPL36A-HNRNPH2H7BZ11 118 aa9.74□□□□□ -0.85
SF3B3-205ENST00000564899 TNFSF13O75888 250 aa9.74□□□□□ -0.85
SF3B3-205ENST00000564899 SEC14L2O76054 403 aa9.74□□□□□ -0.85
SF3B3-205ENST00000564899 SCG5P05408 212 aa9.74□□□□□ -0.85
SF3B3-205ENST00000564899 PSKH1P11801 424 aa9.74□□□□□ -0.85
SF3B3-205ENST00000564899 NPR2P20594 1047 aa9.74□□□□□ -0.85
SF3B3-205ENST00000564899 MSR1P21757 451 aa9.74□□□□□ -0.85
SF3B3-205ENST00000564899 CEACAM8P31997 349 aaPredicted RBP9.74□□□□□ -0.85
SF3B3-205ENST00000564899 RPS27P42677 84 aaKnown RBP9.74□□□□□ -0.85
SF3B3-205ENST00000564899 NR1H2P55055 460 aa9.74□□□□□ -0.85
SF3B3-205ENST00000564899 MRPS34P82930 218 aaKnown RBP9.74□□□□□ -0.85
SF3B3-205ENST00000564899 ZNF85Q03923 595 aa9.74□□□□□ -0.85
SF3B3-205ENST00000564899 FAPQ12884 760 aa9.74□□□□□ -0.85
SF3B3-205ENST00000564899 BLMHQ13867 455 aa9.74□□□□□ -0.85
SF3B3-205ENST00000564899 GALEQ14376 348 aa9.74□□□□□ -0.85
SF3B3-205ENST00000564899 CDSNQ15517 529 aa9.74□□□□□ -0.85
SF3B3-205ENST00000564899 KCNMB1Q16558 191 aa9.74□□□□□ -0.85
SF3B3-205ENST00000564899 TEX30Q5JUR7 227 aa9.74□□□□□ -0.85
SF3B3-205ENST00000564899 C9orf135Q5VTT2 229 aa9.74□□□□□ -0.85
SF3B3-205ENST00000564899 SLC18B1Q6NT16 456 aa9.74□□□□□ -0.85
SF3B3-205ENST00000564899 SSX6Q7RTT6 188 aa9.74□□□□□ -0.85
SF3B3-205ENST00000564899 ZNF367Q7RTV3 350 aa9.74□□□□□ -0.85
SF3B3-205ENST00000564899 LHFPL3Q86UP9 236 aa9.74□□□□□ -0.85
SF3B3-205ENST00000564899 LINC00346Q8IVM7 164 aa9.74□□□□□ -0.85
SF3B3-205ENST00000564899 KLHL36Q8N4N3 616 aa9.74□□□□□ -0.85
SF3B3-205ENST00000564899 RFLNBQ8N5W9 214 aa9.74□□□□□ -0.85
SF3B3-205ENST00000564899 NANOGP1Q8N7R0 232 aa9.74□□□□□ -0.85
SF3B3-205ENST00000564899 ZNF454Q8N9F8 522 aa9.74□□□□□ -0.85
SF3B3-205ENST00000564899 NAXEQ8NCW5 288 aa9.74□□□□□ -0.85
SF3B3-205ENST00000564899 OTOSQ8NHW6 89 aa9.74□□□□□ -0.85
SF3B3-205ENST00000564899 FCGR1BQ92637 280 aa9.74□□□□□ -0.85
SF3B3-205ENST00000564899 RORBQ92753 470 aa9.74□□□□□ -0.85
SF3B3-205ENST00000564899 NABP1Q96AH0 204 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms