RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 CCL5P13501 91 aa18.51■□□□□ 0.55
MAP1LC3B-206ENST00000564844 ABHD13Q7L211 337 aa18.51■□□□□ 0.55
MAP1LC3B-206ENST00000564844 PRR22Q8IZ63 422 aa18.51■□□□□ 0.55
MAP1LC3B-206ENST00000564844 GPX8Q8TED1 209 aa18.51■□□□□ 0.55
MAP1LC3B-206ENST00000564844 STACQ99469 402 aa18.51■□□□□ 0.55
MAP1LC3B-206ENST00000564844 HDAC8Q9BY41 377 aa18.51■□□□□ 0.55
MAP1LC3B-206ENST00000564844 SLC17A9Q9BYT1 436 aa18.51■□□□□ 0.55
MAP1LC3B-206ENST00000564844 KLK13Q9UKR3 277 aa18.51■□□□□ 0.55
MAP1LC3B-206ENST00000564844 SPACA6W5XKT8 324 aa18.51■□□□□ 0.55
MAP1LC3B-206ENST00000564844 IGKV1D-42A0A075B6H8 117 aa18.5■□□□□ 0.55
MAP1LC3B-206ENST00000564844 LOC100289279A0A1B0GTE1 492 aa18.5■□□□□ 0.55
MAP1LC3B-206ENST00000564844 ZNF208O43345 1280 aa18.5■□□□□ 0.55
MAP1LC3B-206ENST00000564844 GPR143P51810 404 aa18.5■□□□□ 0.55
MAP1LC3B-206ENST00000564844 TDGQ13569 410 aa18.5■□□□□ 0.55
MAP1LC3B-206ENST00000564844 MESTQ5EB52 335 aa18.5■□□□□ 0.55
MAP1LC3B-206ENST00000564844 EXOSC6Q5RKV6 272 aaKnown RBP18.5■□□□□ 0.55
MAP1LC3B-206ENST00000564844 NPSR1Q6W5P4 371 aa18.5■□□□□ 0.55
MAP1LC3B-206ENST00000564844 ACOT7LQ6ZUV0 252 aa18.5■□□□□ 0.55
MAP1LC3B-206ENST00000564844 ARMC10Q8N2F6 343 aa18.5■□□□□ 0.55
MAP1LC3B-206ENST00000564844 LPAR4Q99677 370 aa18.5■□□□□ 0.55
MAP1LC3B-206ENST00000564844 IER2Q9BTL4 223 aa18.5■□□□□ 0.55
MAP1LC3B-206ENST00000564844 SGCEO43556 437 aa18.5■□□□□ 0.55
MAP1LC3B-206ENST00000564844 EIF3GO75821 320 aaKnown RBP eCLIP18.5■□□□□ 0.55
MAP1LC3B-206ENST00000564844 WISP1O95388 367 aa18.5■□□□□ 0.55
MAP1LC3B-206ENST00000564844 ID4P47928 161 aa18.5■□□□□ 0.55
MAP1LC3B-206ENST00000564844 TFF2Q03403 129 aa18.5■□□□□ 0.55
MAP1LC3B-206ENST00000564844 RPL18Q07020 188 aaKnown RBP18.5■□□□□ 0.55
MAP1LC3B-206ENST00000564844 ZNF528Q3MIS6 628 aa18.5■□□□□ 0.55
MAP1LC3B-206ENST00000564844 C15orf40Q8WUR7 153 aa18.5■□□□□ 0.55
MAP1LC3B-206ENST00000564844 ANKRD9Q96BM1 317 aaPredicted RBP18.5■□□□□ 0.55
MAP1LC3B-206ENST00000564844 APOOQ9BUR5 198 aa18.5■□□□□ 0.55
MAP1LC3B-206ENST00000564844 ST6GALNAC1Q9NSC7 600 aaPredicted RBP18.5■□□□□ 0.55
MAP1LC3B-206ENST00000564844 UPB1Q9UBR1 384 aa18.5■□□□□ 0.55
MAP1LC3B-206ENST00000564844 CSAG2Q9Y5P2 127 aa18.5■□□□□ 0.55
MAP1LC3B-206ENST00000564844 SULT2B1O00204 365 aa18.49■□□□□ 0.55
MAP1LC3B-206ENST00000564844 MPZL1O95297 269 aa18.49■□□□□ 0.55
MAP1LC3B-206ENST00000564844 CD14P08571 375 aa18.49■□□□□ 0.55
MAP1LC3B-206ENST00000564844 HPGDP15428 266 aa18.49■□□□□ 0.55
MAP1LC3B-206ENST00000564844 CSRP1P21291 193 aaKnown RBP18.49■□□□□ 0.55
MAP1LC3B-206ENST00000564844 PRMT2P55345 433 aa18.49■□□□□ 0.55
MAP1LC3B-206ENST00000564844 MFGE8Q08431 387 aaPredicted RBP18.49■□□□□ 0.55
MAP1LC3B-206ENST00000564844 CD226Q15762 336 aa18.49■□□□□ 0.55
MAP1LC3B-206ENST00000564844 CCDC36Q8IYA8 594 aa18.49■□□□□ 0.55
MAP1LC3B-206ENST00000564844 CSNK1A1LQ8N752 337 aa18.49■□□□□ 0.55
MAP1LC3B-206ENST00000564844 ZSCAN1Q8NBB4 408 aa18.49■□□□□ 0.55
MAP1LC3B-206ENST00000564844 OR1E3Q8WZA6 343 aa18.49■□□□□ 0.55
MAP1LC3B-206ENST00000564844 CCDC3Q9BQI4 270 aa18.49■□□□□ 0.55
MAP1LC3B-206ENST00000564844 RSPH9Q9H1X1 276 aaPredicted RBP18.49■□□□□ 0.55
MAP1LC3B-206ENST00000564844 CELSR3Q9NYQ7 3312 aa18.49■□□□□ 0.55
MAP1LC3B-206ENST00000564844 A0A1W2PPC1 479 aa18.49■□□□□ 0.55
MAP1LC3B-206ENST00000564844 NKX2-2O95096 273 aa18.49■□□□□ 0.55
MAP1LC3B-206ENST00000564844 ERCC1P07992 297 aaPredicted RBP18.49■□□□□ 0.55
MAP1LC3B-206ENST00000564844 ALOX5APP20292 161 aa18.49■□□□□ 0.55
MAP1LC3B-206ENST00000564844 RBM34P42696 430 aaKnown RBP18.49■□□□□ 0.55
MAP1LC3B-206ENST00000564844 PNLIPRP2P54317 469 aa18.49■□□□□ 0.55
MAP1LC3B-206ENST00000564844 MPPED2Q15777 294 aa18.49■□□□□ 0.55
MAP1LC3B-206ENST00000564844 NKAPLQ5M9Q1 402 aa18.49■□□□□ 0.55
MAP1LC3B-206ENST00000564844 TIMM29Q9BSF4 260 aa18.49■□□□□ 0.55
MAP1LC3B-206ENST00000564844 BIN3Q9NQY0 253 aa18.49■□□□□ 0.55
MAP1LC3B-206ENST00000564844 TRANK1O15050 2925 aa18.49■□□□□ 0.55
MAP1LC3B-206ENST00000564844 EIF1AYO14602 144 aaKnown RBP18.48■□□□□ 0.55
MAP1LC3B-206ENST00000564844 AIMP2Q13155 320 aaKnown RBP18.48■□□□□ 0.55
MAP1LC3B-206ENST00000564844 GPR18Q14330 331 aa18.48■□□□□ 0.55
MAP1LC3B-206ENST00000564844 INPP5JQ15735 1006 aaPredicted RBP18.48■□□□□ 0.55
MAP1LC3B-206ENST00000564844 SLC35D3Q5M8T2 416 aa18.48■□□□□ 0.55
MAP1LC3B-206ENST00000564844 SLC29A4Q7RTT9 530 aa18.48■□□□□ 0.55
MAP1LC3B-206ENST00000564844 SFT2D1Q8WV19 159 aa18.48■□□□□ 0.55
MAP1LC3B-206ENST00000564844 FANCMQ8IYD8 2048 aa18.48■□□□□ 0.55
MAP1LC3B-206ENST00000564844 TRBV23-1A0A0A0MS06 115 aa18.48■□□□□ 0.55
MAP1LC3B-206ENST00000564844 OR6A2O95222 327 aa18.48■□□□□ 0.55
MAP1LC3B-206ENST00000564844 ACTBP60709 375 aa18.48■□□□□ 0.55
MAP1LC3B-206ENST00000564844 ACTG1P63261 375 aa18.48■□□□□ 0.55
MAP1LC3B-206ENST00000564844 LINC00114Q6XXX2 140 aa18.48■□□□□ 0.55
MAP1LC3B-206ENST00000564844 ZNF550Q7Z398 422 aa18.48■□□□□ 0.55
MAP1LC3B-206ENST00000564844 CAMKVQ8NCB2 501 aa18.48■□□□□ 0.55
MAP1LC3B-206ENST00000564844 OR4A4PQ8NGN8 299 aa18.48■□□□□ 0.55
MAP1LC3B-206ENST00000564844 SLC25A44Q96H78 314 aaPredicted RBP18.48■□□□□ 0.55
MAP1LC3B-206ENST00000564844 C4orf45Q96LM5 186 aa18.48■□□□□ 0.55
MAP1LC3B-206ENST00000564844 SPACA5Q96QH8 159 aa18.48■□□□□ 0.55
MAP1LC3B-206ENST00000564844 TSPAN32Q96QS1 320 aa18.48■□□□□ 0.55
MAP1LC3B-206ENST00000564844 INTS14Q96SY0 518 aa18.48■□□□□ 0.55
MAP1LC3B-206ENST00000564844 ATXN7L1Q9ULK2 861 aaPredicted RBP18.48■□□□□ 0.55
MAP1LC3B-206ENST00000564844 DHDHQ9UQ10 334 aa18.48■□□□□ 0.55
MAP1LC3B-206ENST00000564844 CDC14CA4D256 554 aa18.48■□□□□ 0.55
MAP1LC3B-206ENST00000564844 TGFBR3LH3BV60 316 aa18.48■□□□□ 0.55
MAP1LC3B-206ENST00000564844 ARPC3O15145 178 aa18.48■□□□□ 0.55
MAP1LC3B-206ENST00000564844 OR2F2O95006 317 aa18.48■□□□□ 0.55
MAP1LC3B-206ENST00000564844 KAT7O95251 611 aa18.48■□□□□ 0.55
MAP1LC3B-206ENST00000564844 NUDT14O95848 222 aa18.48■□□□□ 0.55
MAP1LC3B-206ENST00000564844 MAOAP21397 527 aa18.48■□□□□ 0.55
MAP1LC3B-206ENST00000564844 HTR2CP28335 458 aa18.48■□□□□ 0.55
MAP1LC3B-206ENST00000564844 OR2F1Q13607 317 aa18.48■□□□□ 0.55
MAP1LC3B-206ENST00000564844 CDC20BQ86Y33 519 aa18.48■□□□□ 0.55
MAP1LC3B-206ENST00000564844 ZNF584Q8IVC4 421 aa18.48■□□□□ 0.55
MAP1LC3B-206ENST00000564844 OR5AP2Q8NGF4 316 aa18.48■□□□□ 0.55
MAP1LC3B-206ENST00000564844 ZNF563Q8TA94 476 aa18.48■□□□□ 0.55
MAP1LC3B-206ENST00000564844 RAB7BQ96AH8 199 aa18.48■□□□□ 0.55
MAP1LC3B-206ENST00000564844 PRSS38A1L453 326 aa18.47■□□□□ 0.55
MAP1LC3B-206ENST00000564844 URADA6NGE7 173 aa18.47■□□□□ 0.55
MAP1LC3B-206ENST00000564844 PTGFRP43088 359 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms